Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s27.

Sample reads: 133,399. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25520.01 191305.41
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4544.31 34065.47 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 3132.23 23480.11 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. zgc:161979 zgc:161979 3055.21 22902.74
5. zgc:161979_1 zgc:161979_1 3029.54 22710.31
6. apoeb ENSDARG00000040295 2772.80 20785.71 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
7. apoa2 ENSDARG00000015866 2618.75 19630.91 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
8. tmsb4x ENSDARG00000077777 2516.06 18861.12 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apobb apobb 2310.66 17321.38
10. apoc1l apoc1l 2310.66 17321.38
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1591.79 11932.52 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. AC024175.17 AC024175.17 1181.01 8853.19
13. actb2 ENSDARG00000037870 1078.31 8083.33 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
14. actb1 ENSDARG00000037746, ENSDARG00000113649 1052.64 7890.90 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. rbp4 ENSDARG00000101199 1026.96 7698.39 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
16. apoa4 apoa4 821.57 6158.73
17. fabp2 ENSDARG00000006427, ENSDARG00000110230 821.57 6158.73 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
18. fetub ENSDARG00000053973 718.87 5388.86 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
19. bhmt ENSDARG00000013430 667.53 5004.00 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
20. mt-nd2 ENSDARG00000063899 667.53 5004.00 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
21. mt-co2 ENSDARG00000063908 616.18 4619.06 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
22. ctsla ENSDARG00000007836 564.83 4234.13 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
23. eef1a1l1 ENSDARG00000020850 564.83 4234.13 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
24. mt-nd4 ENSDARG00000063917 564.83 4234.13 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
25. mt-atp6 ENSDARG00000063911 513.48 3849.20 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
26. pvalb9 ENSDARG00000071601, ENSDARG00000113946 513.48 3849.20 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
27. si:dkey-150i13.2 ENSDARG00000071052 513.48 3849.20 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
28. zgc:158463 ENSDARG00000089382 487.81 3656.77 zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
29. mt2 ENSDARG00000041623, ENSDARG00000113583 462.13 3464.26 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
30. si:dkey-151g10.6 si:dkey-151g10.6 436.46 3271.83
31. mt-co3 ENSDARG00000063912 410.78 3079.33 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
32. mt-nd1 ENSDARG00000063895 410.78 3079.33 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
33. ahcy ENSDARG00000005191 385.11 2886.90 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
34. mt-cyb ENSDARG00000063924 385.11 2886.90 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. ldhba ENSDARG00000019644 359.44 2694.47 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
36. zgc:153129 zgc:153129 359.44 2694.47
37. APOB APOB 333.76 2501.96
38. apoc2 ENSDARG00000092155 308.09 2309.53 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
39. cfl1l ENSDARG00000012972 308.09 2309.53 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
40. eef2b ENSDARG00000100371, ENSDARG00000109247 308.09 2309.53 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
41. gatm ENSDARG00000036239 308.09 2309.53 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
42. rps2 ENSDARG00000077291 308.09 2309.53 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
43. tfa ENSDARG00000016771 308.09 2309.53 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
44. ppiaa ENSDARG00000009212 282.41 2117.03 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
45. psap ENSDARG00000013968 282.41 2117.03 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
46. ctsba ENSDARG00000055120 256.74 1924.60 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
47. hspa8 ENSDARG00000068992, ENSDARG00000114726 256.74 1924.60 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
48. mt-co1 ENSDARG00000063905 256.74 1924.60 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
49. rps14 ENSDARG00000036629 256.74 1924.60 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
50. slc43a2b ENSDARG00000061120, ENSDARG00000117188 256.74 1924.60 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
51. APOA4 APOA4 231.07 1732.17
52. rpl23 ENSDARG00000053457 231.07 1732.17 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
53. rpl26 ENSDARG00000102317 231.07 1732.17 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
54. rpl36 ENSDARG00000100588 231.07 1732.17 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
55. si:ch1073-429i10.3 231.07 1732.17 si:ch1073-429i10.3, transcript variant X2
56. zgc:165571 zgc:165571 231.07 1732.17
57. zgc:92533 zgc:92533 231.07 1732.17
58. ATP5B 205.39 1539.66 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
59. CU914813.1 CU914813.1 205.39 1539.66
60. btf3 ENSDARG00000035400, ENSDARG00000116462 205.39 1539.66 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
61. ckma ENSDARG00000035327, ENSDARG00000114671 205.39 1539.66 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
62. col18a1 col18a1 205.39 1539.66
63. gamt ENSDARG00000070844, ENSDARG00000109945 205.39 1539.66 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
64. rpl18a ENSDARG00000025073 205.39 1539.66 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
65. rpl36a ENSDARG00000058105, ENSDARG00000112656 205.39 1539.66 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
66. rps27a ENSDARG00000032725, ENSDARG00000114059 205.39 1539.66 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
67. sepp1a 205.39 1539.66 selenoprotein P, plasma, 1a
68. zgc:112425 zgc:112425 205.39 1539.66
69. COX5B_1 ENSDARG00000015978 179.72 1347.23 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
70. cox8a ENSDARG00000095273 179.72 1347.23 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
71. cyt1l ENSDARG00000036832 179.72 1347.23 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
72. dbi ENSDARG00000026369 179.72 1347.23 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
73. fabp1b.1 ENSDARG00000059227 179.72 1347.23 fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
74. gapdh ENSDARG00000043457 179.72 1347.23 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
75. jupa ENSDARG00000070787, ENSDARG00000112777 179.72 1347.23 junction plakoglobin a [Source:ZFIN;Acc:ZDB-GENE-991207-22]
76. krt5 ENSDARG00000058371, ENSDARG00000112017 179.72 1347.23 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
77. mthfd1l ENSDARG00000042221, ENSDARG00000110473 179.72 1347.23 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
78. pabpc1a ENSDARG00000017219 179.72 1347.23 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
79. paics ENSDARG00000033539 179.72 1347.23 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
80. rpl10a ENSDARG00000042905, ENSDARG00000115649 179.72 1347.23 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
81. rpl15 ENSDARG00000009285 179.72 1347.23 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
82. rpl8 ENSDARG00000014867 179.72 1347.23 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
83. rplp1 ENSDARG00000021864 179.72 1347.23 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
84. zgc:152830 ENSDARG00000079932 179.72 1347.23 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
85. RPS17L RPS17L 154.04 1154.73
86. a2ml ENSDARG00000056314 154.04 1154.73 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
87. arpc2 ENSDARG00000075989 154.04 1154.73 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
88. atp1b1b ENSDARG00000076833 154.04 1154.73 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
89. cox7a3 154.04 1154.73 cytochrome c oxidase subunit VIIa polypeptide 3
90. hao1 ENSDARG00000024160 154.04 1154.73 hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
91. mt-nd5 ENSDARG00000063921 154.04 1154.73 NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
92. myh9a ENSDARG00000063295 154.04 1154.73 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
93. pfn1 ENSDARG00000088091 154.04 1154.73 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
94. rpl14 ENSDARG00000103433 154.04 1154.73 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
95. rpl18 ENSDARG00000029533 154.04 1154.73 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
96. rpl21 ENSDARG00000010516, ENSDARG00000110263 154.04 1154.73 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
97. rpl27 ENSDARG00000015128 154.04 1154.73 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
98. rpl35 ENSDARG00000018334 154.04 1154.73 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
99. rplp2 ENSDARG00000101406 154.04 1154.73 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
100. rps12 ENSDARG00000036875, ENSDARG00000115157 154.04 1154.73 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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