Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_trunk1, section s26.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 20549.82 154050.38
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5111.60 38318.77 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:161979 zgc:161979 3777.90 28320.78
4. apoa1b ENSDARG00000101324 3467.61 25994.71 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. apoeb ENSDARG00000040295 3140.99 23546.23 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. apoc1l apoc1l 2885.14 21628.26
7. zgc:161979_1 zgc:161979_1 2819.82 21138.60
8. apoa2 ENSDARG00000015866 2759.94 20689.71 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. tmsb4x ENSDARG00000077777 1747.42 13099.42 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apoa1a ENSDARG00000012076, ENSDARG00000110395 1622.21 12160.79 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
11. apobb apobb 1600.44 11997.59
12. actb2 ENSDARG00000037870 1322.81 9916.36 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1028.85 7712.71 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. ctsla ENSDARG00000007836 941.75 7059.77 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
15. rbp4 ENSDARG00000101199 903.65 6774.15 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
16. mt-nd2 ENSDARG00000063899 876.43 6570.10 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
17. zgc:153129 zgc:153129 865.54 6488.46
18. bhmt ENSDARG00000013430 860.10 6447.68 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
19. fabp2 ENSDARG00000006427, ENSDARG00000110230 854.65 6406.83 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
20. apoa4 apoa4 745.78 5590.69
21. eef1a1l1 ENSDARG00000020850 653.24 4896.97 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. mt-co2 ENSDARG00000063908 642.35 4815.33 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
23. mt-nd4 ENSDARG00000063917 571.58 4284.81 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
24. mt-atp6 ENSDARG00000063911 555.25 4162.40 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
25. fetub ENSDARG00000053973 528.04 3958.42 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
26. mt2 ENSDARG00000041623, ENSDARG00000113583 517.15 3876.78 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
27. cfl1l ENSDARG00000012972 484.49 3631.95 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
28. mt-co3 ENSDARG00000063912 468.15 3509.46 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
29. apoc2 ENSDARG00000092155 440.94 3305.48 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
30. mt-nd1 ENSDARG00000063895 397.39 2979.01 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
31. mt-cyb ENSDARG00000063924 353.84 2652.54 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
32. tfa ENSDARG00000016771 348.39 2611.68 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
33. zgc:92533 zgc:92533 348.39 2611.68
34. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 332.06 2489.27 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
35. gamt ENSDARG00000070844, ENSDARG00000109945 332.06 2489.27 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
36. rpl23 ENSDARG00000053457 332.06 2489.27 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
37. dbi ENSDARG00000026369 293.96 2203.65 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
38. apoea ENSDARG00000102004 283.07 2122.02 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
39. btf3 ENSDARG00000035400, ENSDARG00000116462 272.18 2040.38 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
40. pvalb9 ENSDARG00000071601, ENSDARG00000113946 272.18 2040.38 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
41. rpl10a ENSDARG00000042905, ENSDARG00000115649 272.18 2040.38 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
42. eef2b ENSDARG00000100371, ENSDARG00000109247 255.85 1917.96 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. si:dkey-151g10.6 si:dkey-151g10.6 255.85 1917.96
44. pfn1 ENSDARG00000088091 250.41 1877.18 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
45. sepp1a 244.96 1836.33 selenoprotein P, plasma, 1a
46. ldhba ENSDARG00000019644 239.52 1795.55 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
47. gatm ENSDARG00000036239 234.08 1754.77 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
48. ppiaa ENSDARG00000009212 234.08 1754.77 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
49. hmga1a ENSDARG00000028335 228.63 1713.91 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
50. psap ENSDARG00000013968 228.63 1713.91 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
51. rpl19 ENSDARG00000013307 228.63 1713.91 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
52. si:dkey-150i13.2 ENSDARG00000071052 228.63 1713.91 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
53. FP067396.1 FP067396.1 223.19 1673.13
54. prdx5 ENSDARG00000055064 223.19 1673.13 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
55. rpl8 ENSDARG00000014867 223.19 1673.13 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
56. hspa8 ENSDARG00000068992, ENSDARG00000114726 217.75 1632.35 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
57. slc43a2b ENSDARG00000061120, ENSDARG00000117188 217.75 1632.35 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
58. rpl11 ENSDARG00000043509 212.30 1591.49 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
59. rpl21 ENSDARG00000010516, ENSDARG00000110263 212.30 1591.49 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
60. APOB APOB 206.86 1550.71
61. atp1b1b ENSDARG00000076833 201.42 1509.93 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
62. capns1b ENSDARG00000013804 201.42 1509.93 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
63. cyt1l ENSDARG00000036832 195.97 1469.08 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
64. rpl18a ENSDARG00000025073 195.97 1469.08 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
65. rpl35 ENSDARG00000018334 195.97 1469.08 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
66. rps23 ENSDARG00000021838 195.97 1469.08 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
67. rps26l ENSDARG00000030408 195.97 1469.08 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
68. zgc:165571 zgc:165571 195.97 1469.08
69. myl12.1 ENSDARG00000099766 190.53 1428.30 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
70. rpl26 ENSDARG00000102317 190.53 1428.30 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
71. zgc:112425 zgc:112425 190.53 1428.30
72. hsp90ab1 ENSDARG00000029150 185.08 1387.44 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
73. APOA4 APOA4 179.64 1346.66
74. ahcy ENSDARG00000005191 179.64 1346.66 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
75. zgc:136410 ENSDARG00000102241 179.64 1346.66 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
76. paics ENSDARG00000033539 174.20 1305.88 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
77. rps5 ENSDARG00000043453 174.20 1305.88 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
78. fahd2a ENSDARG00000103759 168.75 1265.02 fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
79. rpl36 ENSDARG00000100588 168.75 1265.02 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
80. CU914813.1 CU914813.1 163.31 1224.24
81. cox8a ENSDARG00000095273 163.31 1224.24 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
82. dynll1 ENSDARG00000058454 163.31 1224.24 dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
83. mt-co1 ENSDARG00000063905 163.31 1224.24 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
84. npc2 ENSDARG00000090912 163.31 1224.24 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
85. rplp1 ENSDARG00000021864 163.31 1224.24 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
86. icn ENSDARG00000009978 157.87 1183.46 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
87. ptmab ENSDARG00000101766 157.87 1183.46 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
88. rpsa ENSDARG00000019181 157.87 1183.46 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
89. zgc:152830 ENSDARG00000079932 157.87 1183.46 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
90. krt8 ENSDARG00000058358, ENSDARG00000109279 152.42 1142.61 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
91. mat1a ENSDARG00000039605, ENSDARG00000115975 152.42 1142.61 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
92. rpl5b ENSDARG00000015862, ENSDARG00000109661 152.42 1142.61 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
93. rps14 ENSDARG00000036629 152.42 1142.61 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
94. ATP5B 146.98 1101.83 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
95. ckmt1 ENSDARG00000016598, ENSDARG00000113143 146.98 1101.83 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
96. fgb ENSDARG00000008969 146.98 1101.83 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
97. ces2 ENSDARG00000041569, ENSDARG00000110630 141.54 1061.05 carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
98. cst3 ENSDARG00000007795 141.54 1061.05 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
99. fgg ENSDARG00000037281, ENSDARG00000114705 141.54 1061.05 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
100. myh9a ENSDARG00000063295 141.54 1061.05 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA