Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_trunk1, section s25.

Sample reads: 133,399. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 28241.30 211706.22
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5000.08 37482.27 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:161979 zgc:161979 3217.29 24117.88
4. apoa1b ENSDARG00000101324 2892.61 21683.97 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. zgc:161979_1 zgc:161979_1 2821.77 21152.93
6. apoeb ENSDARG00000040295 2402.64 18010.99 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
7. apoc1l apoc1l 2396.73 17966.69
8. tmsb4x ENSDARG00000077777 2396.73 17966.69 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apoa2 ENSDARG00000015866 2319.99 17391.42 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. apobb apobb 1830.02 13718.44
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1534.85 11505.75 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. actb2 ENSDARG00000037870 1074.40 8054.06 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 968.14 7257.50 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. ctsla ENSDARG00000007836 749.72 5620.15 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
15. fabp2 ENSDARG00000006427, ENSDARG00000110230 732.01 5487.39 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
16. mt-nd2 ENSDARG00000063899 732.01 5487.39 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
17. zgc:153129 zgc:153129 714.30 5354.63
18. mt-co2 ENSDARG00000063908 655.26 4912.05 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
19. bhmt ENSDARG00000013430 643.46 4823.59 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
20. eef1a1l1 ENSDARG00000020850 602.13 4513.77 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. fetub ENSDARG00000053973 596.23 4469.54 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
22. rbp4 ENSDARG00000101199 596.23 4469.54 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
23. mt-nd4 ENSDARG00000063917 525.39 3938.50 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
24. apoa4 apoa4 501.78 3761.51
25. mt2 ENSDARG00000041623, ENSDARG00000113583 466.36 3495.99 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
26. mt-atp6 ENSDARG00000063911 430.94 3230.47 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
27. mt-co3 ENSDARG00000063912 377.81 2832.19 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
28. si:dkey-151g10.6 si:dkey-151g10.6 366.00 2743.66
29. pvalb9 ENSDARG00000071601, ENSDARG00000113946 360.10 2699.43 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
30. gatm ENSDARG00000036239 354.20 2655.20 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
31. mt-cyb ENSDARG00000063924 354.20 2655.20 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
32. si:dkey-150i13.2 ENSDARG00000071052 336.49 2522.44 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
33. cfl1l ENSDARG00000012972 330.58 2478.14 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
34. hmga1a ENSDARG00000028335 330.58 2478.14 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
35. tfa ENSDARG00000016771 330.58 2478.14 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
36. apoc2 ENSDARG00000092155 312.87 2345.38 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
37. eef2b ENSDARG00000100371, ENSDARG00000109247 301.07 2256.92 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
38. mt-nd1 ENSDARG00000063895 295.16 2212.62 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
39. cyt1l ENSDARG00000036832 289.26 2168.39 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 289.26 2168.39 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. aldob ENSDARG00000053684 271.55 2035.63 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
42. zgc:112425 zgc:112425 271.55 2035.63
43. AC024175.17 AC024175.17 265.65 1991.40
44. gamt ENSDARG00000070844, ENSDARG00000109945 265.65 1991.40 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
45. zgc:152830 ENSDARG00000079932 265.65 1991.40 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
46. sepp1a 253.84 1902.87 selenoprotein P, plasma, 1a
47. slc43a2b ENSDARG00000061120, ENSDARG00000117188 253.84 1902.87 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
48. zgc:92533 zgc:92533 242.03 1814.34
49. hspa8 ENSDARG00000068992, ENSDARG00000114726 236.13 1770.11 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
50. APOB APOB 230.23 1725.88
51. ahcy ENSDARG00000005191 230.23 1725.88 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
52. rpl23 ENSDARG00000053457 212.52 1593.12 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
53. dbi ENSDARG00000026369 200.71 1504.59 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
54. npc2 ENSDARG00000090912 200.71 1504.59 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
55. myl12.1 ENSDARG00000099766 194.81 1460.36 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
56. pabpc1a ENSDARG00000017219 183.00 1371.83 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
57. rpl21 ENSDARG00000010516, ENSDARG00000110263 183.00 1371.83 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
58. FP067396.1 FP067396.1 177.10 1327.60
59. btf3 ENSDARG00000035400, ENSDARG00000116462 177.10 1327.60 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
60. pfn1 ENSDARG00000088091 177.10 1327.60 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
61. rpl26 ENSDARG00000102317 177.10 1327.60 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
62. mt-co1 ENSDARG00000063905 171.20 1283.37 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
63. myl6 ENSDARG00000008494, ENSDARG00000115496 171.20 1283.37 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
64. ptmab ENSDARG00000101766 171.20 1283.37 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
65. ldhba ENSDARG00000019644 165.29 1239.07 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
66. nt5c3a ENSDARG00000058597 165.29 1239.07 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
67. APOA4 APOA4 159.39 1194.84
68. krt8 ENSDARG00000058358, ENSDARG00000109279 159.39 1194.84 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
69. ppiaa ENSDARG00000009212 159.39 1194.84 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
70. rpl19 ENSDARG00000013307 159.39 1194.84 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
71. rpl36a ENSDARG00000058105, ENSDARG00000112656 159.39 1194.84 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
72. rps14 ENSDARG00000036629 159.39 1194.84 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
73. ssr2 ENSDARG00000005230 159.39 1194.84 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
74. paics ENSDARG00000033539 153.49 1150.61 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
75. rpia ENSDARG00000056640, ENSDARG00000110576 153.49 1150.61 ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
76. tmem63ba ENSDARG00000104559 153.49 1150.61 transmembrane protein 63Ba [Source:ZFIN;Acc:ZDB-GENE-030131-4320]
77. mthfd1l ENSDARG00000042221, ENSDARG00000110473 147.58 1106.31 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
78. rpl11 ENSDARG00000043509 147.58 1106.31 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
79. rpl18a ENSDARG00000025073 147.58 1106.31 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
80. prps1a ENSDARG00000015524 141.68 1062.08 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
81. rps2 ENSDARG00000077291 141.68 1062.08 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
82. si:dkeyp-86f7.3 si:dkeyp-86f7.3 141.68 1062.08
83. btg1 ENSDARG00000027249 135.78 1017.85 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
84. rps15 ENSDARG00000070849, ENSDARG00000110979 135.78 1017.85 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
85. tpi1b ENSDARG00000040988, ENSDARG00000113061 135.78 1017.85 triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
86. myh9a ENSDARG00000063295 129.87 973.55 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
87. rplp1 ENSDARG00000021864 129.87 973.55 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
88. rps19 ENSDARG00000030602 129.87 973.55 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
89. rps27a ENSDARG00000032725, ENSDARG00000114059 129.87 973.55 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
90. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 123.97 929.32 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
91. mt-nd3 ENSDARG00000063914 123.97 929.32 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
92. psap ENSDARG00000013968 123.97 929.32 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
93. zgc:153867 123.97 929.32 zgc:153867, transcript variant X2
94. zgc:165571 zgc:165571 123.97 929.32
95. hsp90ab1 ENSDARG00000029150 118.07 885.09 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
96. prdx5 ENSDARG00000055064 118.07 885.09 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
97. rpl14 ENSDARG00000103433 118.07 885.09 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
98. rpl5b ENSDARG00000015862, ENSDARG00000109661 118.07 885.09 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
99. rpl9 ENSDARG00000037350, ENSDARG00000112384 118.07 885.09 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
100. rplp2 ENSDARG00000101406 118.07 885.09 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA