Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s24.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 28299.66 212126.53
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4138.12 31018.22 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:161979 zgc:161979 3087.81 23145.38
4. apoa2 ENSDARG00000015866 2912.01 21827.63 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. apoa1b ENSDARG00000101324 2826.36 21185.62 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. apoc1l apoc1l 2727.19 20442.27
7. apoeb ENSDARG00000040295 2650.56 19867.87 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. zgc:161979_1 zgc:161979_1 2362.06 17705.36
9. apobb apobb 1834.65 13752.04
10. tmsb4x ENSDARG00000077777 1685.90 12637.05 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1469.53 11015.20 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. actb2 ENSDARG00000037870 888.03 6656.43 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. ctsla ENSDARG00000007836 860.98 6453.67 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
14. rbp4 ENSDARG00000101199 856.47 6419.87 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
15. bhmt ENSDARG00000013430 797.87 5980.62 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
16. actb1 ENSDARG00000037746, ENSDARG00000113649 793.36 5946.81 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
17. mt-co2 ENSDARG00000063908 748.29 5608.98 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
18. mt-nd2 ENSDARG00000063899 739.27 5541.37 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
19. fabp2 ENSDARG00000006427, ENSDARG00000110230 689.69 5169.73 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
20. mt2 ENSDARG00000041623, ENSDARG00000113583 667.15 5000.77 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
21. mt-nd4 ENSDARG00000063917 590.52 4426.38 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
22. apoa4 apoa4 563.47 4223.62
23. fetub ENSDARG00000053973 554.45 4156.01 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
24. mt-atp6 ENSDARG00000063911 554.45 4156.01 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
25. eef1a1l1 ENSDARG00000020850 522.90 3919.52 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
26. mt-co3 ENSDARG00000063912 518.39 3885.71 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
27. si:dkey-150i13.2 ENSDARG00000071052 495.85 3716.76 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
28. zgc:153129 zgc:153129 468.81 3514.07
29. tfa ENSDARG00000016771 383.16 2872.06 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
30. mt-nd1 ENSDARG00000063895 365.13 2736.91 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
31. mt-cyb ENSDARG00000063924 342.59 2567.96 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
32. apoc2 ENSDARG00000092155 338.08 2534.16 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
33. cfl1l ENSDARG00000012972 329.07 2466.62 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
34. cyt1l ENSDARG00000036832 270.47 2027.37 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
35. rpl23 ENSDARG00000053457 265.96 1993.56 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
36. ahcy ENSDARG00000005191 256.94 1925.95 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
37. psap ENSDARG00000013968 256.94 1925.95 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
38. gamt ENSDARG00000070844, ENSDARG00000109945 252.43 1892.15 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
39. APOA4 APOA4 243.42 1824.61
40. hmga1a ENSDARG00000028335 243.42 1824.61 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
41. pvalb9 ENSDARG00000071601, ENSDARG00000113946 243.42 1824.61 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
42. btf3 ENSDARG00000035400, ENSDARG00000116462 234.40 1757.00 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
43. prdx5 ENSDARG00000055064 234.40 1757.00 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
44. sepp1a 234.40 1757.00 selenoprotein P, plasma, 1a
45. rpl21 ENSDARG00000010516, ENSDARG00000110263 229.90 1723.27 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
46. zgc:92533 zgc:92533 229.90 1723.27
47. ssr2 ENSDARG00000005230 225.39 1689.46 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
48. dbi ENSDARG00000026369 220.88 1655.66 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
49. hspa8 ENSDARG00000068992, ENSDARG00000114726 220.88 1655.66 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
50. si:dkey-151g10.6 si:dkey-151g10.6 220.88 1655.66
51. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 211.86 1588.04 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
52. npc2 ENSDARG00000090912 207.36 1554.31 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
53. ptmab ENSDARG00000101766 207.36 1554.31 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
54. APOB APOB 202.85 1520.51
55. aldob ENSDARG00000053684 202.85 1520.51 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
56. rpl10a ENSDARG00000042905, ENSDARG00000115649 202.85 1520.51 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
57. pfn1 ENSDARG00000088091 189.33 1419.17 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
58. gatm ENSDARG00000036239 184.82 1385.36 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
59. mt-co1 ENSDARG00000063905 184.82 1385.36 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
60. slc43a2b ENSDARG00000061120, ENSDARG00000117188 184.82 1385.36 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
61. hdlbp hdlbp 180.31 1351.55
62. ppiaa ENSDARG00000009212 180.31 1351.55 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
63. rpl36a ENSDARG00000058105, ENSDARG00000112656 180.31 1351.55 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
64. eef2b ENSDARG00000100371, ENSDARG00000109247 175.80 1317.75 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
65. ckmt1 ENSDARG00000016598, ENSDARG00000113143 171.29 1283.94 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
66. fgg ENSDARG00000037281, ENSDARG00000114705 166.79 1250.21 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
67. rps26l ENSDARG00000030408 166.79 1250.21 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
68. si:dkeyp-86f7.3 si:dkeyp-86f7.3 166.79 1250.21
69. zgc:165571 zgc:165571 166.79 1250.21
70. nt5c3a ENSDARG00000058597 162.28 1216.41 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
71. rpl8 ENSDARG00000014867 162.28 1216.41 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
72. paics ENSDARG00000033539 157.77 1182.60 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
73. rpl26 ENSDARG00000102317 157.77 1182.60 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
74. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 153.26 1148.80 cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
75. zgc:112425 zgc:112425 153.26 1148.80
76. zgc:152830 ENSDARG00000079932 153.26 1148.80 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
77. hsp90ab1 ENSDARG00000029150 148.76 1115.06 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
78. CU914813.1 CU914813.1 144.25 1081.26
79. ctsba ENSDARG00000055120 144.25 1081.26 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
80. h3f3a 144.25 1081.26 H3 histone, family 3A, transcript variant X1
81. krt8 ENSDARG00000058358, ENSDARG00000109279 144.25 1081.26 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
82. ldhba ENSDARG00000019644 144.25 1081.26 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
83. myh9a ENSDARG00000063295 144.25 1081.26 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
84. rpl19 ENSDARG00000013307 144.25 1081.26 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
85. rplp1 ENSDARG00000021864 144.25 1081.26 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
86. capns1b ENSDARG00000013804 139.74 1047.45 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
87. cd63 ENSDARG00000025147, ENSDARG00000115979 139.74 1047.45 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
88. glula ENSDARG00000099776 139.74 1047.45 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
89. myl12.1 ENSDARG00000099766 139.74 1047.45 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
90. rps14 ENSDARG00000036629 139.74 1047.45 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
91. rps23 ENSDARG00000021838 139.74 1047.45 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
92. FP067396.1 FP067396.1 135.23 1013.65
93. rpl6 ENSDARG00000058451 135.23 1013.65 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
94. rps27a ENSDARG00000032725, ENSDARG00000114059 135.23 1013.65 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
95. serpina1l ENSDARG00000090850 135.23 1013.65 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
96. atp6v0ca ENSDARG00000057853 130.72 979.84 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
97. mat1a ENSDARG00000039605, ENSDARG00000115975 130.72 979.84 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
98. rpl27 ENSDARG00000015128 130.72 979.84 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
99. btg1 ENSDARG00000027249 126.22 946.11 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
100. hmgn2 ENSDARG00000099572 126.22 946.11 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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