Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s23.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 27801.07 208409.48
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5309.02 39798.83 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 2400.64 17996.29 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. apoa1b ENSDARG00000101324 2284.84 17128.20 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. apoc1l apoc1l 2182.40 16360.26
6. apoeb ENSDARG00000040295 2075.50 15558.89 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
7. zgc:161979 zgc:161979 1973.07 14791.03
8. zgc:161979_1 zgc:161979_1 1835.00 13756.00
9. apobb apobb 1750.37 13121.57
10. apoa2 ENSDARG00000015866 1670.20 12520.58 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
11. actb2 ENSDARG00000037870 1398.52 10483.94 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1144.65 8580.82 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1064.48 7979.83 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. AC024175.17 AC024175.17 850.69 6377.16
15. zgc:153129 zgc:153129 721.53 5408.92
16. mt-nd2 ENSDARG00000063899 703.71 5275.33 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
17. ctsla ENSDARG00000007836 672.53 5041.59 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
18. mt-co2 ENSDARG00000063908 672.53 5041.59 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
19. fetub ENSDARG00000053973 641.36 4807.93 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
20. mt-nd4 ENSDARG00000063917 641.36 4807.93 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
21. fabp2 ENSDARG00000006427, ENSDARG00000110230 596.82 4474.03 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
22. eef1a1l1 ENSDARG00000020850 587.91 4407.24 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. bhmt ENSDARG00000013430 530.01 3973.20 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
24. mt-co3 ENSDARG00000063912 458.75 3439.00 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
25. si:dkey-150i13.2 ENSDARG00000071052 436.48 3272.05 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
26. mt2 ENSDARG00000041623, ENSDARG00000113583 432.03 3238.69 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
27. rbp4 ENSDARG00000101199 432.03 3238.69 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
28. apoa4 apoa4 387.49 2904.80
29. eef2b ENSDARG00000100371, ENSDARG00000109247 356.31 2671.06 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
30. mt-atp6 ENSDARG00000063911 351.86 2637.70 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
31. tfa ENSDARG00000016771 347.40 2604.27 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
32. hmga1a ENSDARG00000028335 342.95 2570.91 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
33. zgc:112425 zgc:112425 338.49 2537.48
34. si:dkey-151g10.6 si:dkey-151g10.6 329.59 2470.76
35. slc43a2b ENSDARG00000061120, ENSDARG00000117188 329.59 2470.76 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
36. cfl1l ENSDARG00000012972 320.68 2403.96 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
37. cyt1l ENSDARG00000036832 293.96 2203.66 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
38. zgc:92533 zgc:92533 276.14 2070.07
39. gamt ENSDARG00000070844, ENSDARG00000109945 267.23 2003.28 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
40. sepp1a 258.32 1936.48 selenoprotein P, plasma, 1a
41. mt-cyb ENSDARG00000063924 253.87 1903.13 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
42. mt-nd1 ENSDARG00000063895 253.87 1903.13 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
43. krt8 ENSDARG00000058358, ENSDARG00000109279 249.42 1869.77 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
44. dbi ENSDARG00000026369 244.96 1836.33 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
45. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 244.96 1836.33 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
46. hspa8 ENSDARG00000068992, ENSDARG00000114726 240.51 1802.97 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
47. ptmab ENSDARG00000101766 231.60 1736.18 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
48. bcam ENSDARG00000090190 222.69 1669.39 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
49. btf3 ENSDARG00000035400, ENSDARG00000116462 222.69 1669.39 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
50. ppiaa ENSDARG00000009212 222.69 1669.39 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
51. myh9a ENSDARG00000063295 213.79 1602.67 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
52. gatm ENSDARG00000036239 209.33 1569.23 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
53. pfn1 ENSDARG00000088091 209.33 1569.23 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
54. rpl26 ENSDARG00000102317 204.88 1535.87 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
55. apoc2 ENSDARG00000092155 191.52 1435.72 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
56. npc2 ENSDARG00000090912 191.52 1435.72 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
57. rpl21 ENSDARG00000010516, ENSDARG00000110263 187.06 1402.29 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
58. CU914813.1 CU914813.1 173.70 1302.13
59. ckmt1 ENSDARG00000016598, ENSDARG00000113143 173.70 1302.13 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
60. myl12.1 ENSDARG00000099766 173.70 1302.13 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
61. psap ENSDARG00000013968 173.70 1302.13 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
62. rpl23 ENSDARG00000053457 173.70 1302.13 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
63. rplp1 ENSDARG00000021864 173.70 1302.13 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
64. rps14 ENSDARG00000036629 173.70 1302.13 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
65. rps26l ENSDARG00000030408 173.70 1302.13 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
66. APOA4 APOA4 169.25 1268.78
67. FP067396.1 FP067396.1 169.25 1268.78
68. rpl18a ENSDARG00000025073 169.25 1268.78 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
69. myl6 ENSDARG00000008494, ENSDARG00000115496 164.79 1235.34 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
70. APOB APOB 160.34 1201.98
71. hsp90ab1 ENSDARG00000029150 160.34 1201.98 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
72. rpl10a ENSDARG00000042905, ENSDARG00000115649 155.89 1168.62 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
73. rpl36a ENSDARG00000058105, ENSDARG00000112656 155.89 1168.62 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
74. prps1a ENSDARG00000015524 151.43 1135.19 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
75. zgc:165571 zgc:165571 151.43 1135.19
76. aldob ENSDARG00000053684 146.98 1101.83 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
77. pvalb9 ENSDARG00000071601, ENSDARG00000113946 146.98 1101.83 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
78. rpl8 ENSDARG00000014867 146.98 1101.83 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
79. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 142.52 1068.39 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
80. ldhba ENSDARG00000019644 142.52 1068.39 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
81. mt-co1 ENSDARG00000063905 142.52 1068.39 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
82. ssr2 ENSDARG00000005230 142.52 1068.39 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
83. capns1b ENSDARG00000013804 138.07 1035.04 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
84. AL954137.2 ENSDARG00000114408 133.62 1001.68
85. etfb ENSDARG00000009250 133.62 1001.68 electron transfer flavoprotein subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-1931]
86. glula ENSDARG00000099776 133.62 1001.68 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
87. icn2 ENSDARG00000055514 133.62 1001.68 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
88. mthfd1l ENSDARG00000042221, ENSDARG00000110473 133.62 1001.68 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
89. prdx5 ENSDARG00000055064 133.62 1001.68 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
90. rpl36 ENSDARG00000100588 133.62 1001.68 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
91. rpl6 ENSDARG00000058451 133.62 1001.68 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
92. si:dkeyp-86f7.3 si:dkeyp-86f7.3 133.62 1001.68
93. zgc:152830 ENSDARG00000079932 133.62 1001.68 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
94. btg1 ENSDARG00000027249 129.16 968.24 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
95. icn ENSDARG00000009978 129.16 968.24 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
96. rpl11 ENSDARG00000043509 129.16 968.24 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
97. mat1a ENSDARG00000039605, ENSDARG00000115975 124.71 934.88 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
98. pabpc1a ENSDARG00000017219 124.71 934.88 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
99. rpl9 ENSDARG00000037350, ENSDARG00000112384 124.71 934.88 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
100. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 120.25 901.45 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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