Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s21.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 31225.23 234078.17
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4964.10 37213.10 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2485.52 18632.56 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. zgc:161979 zgc:161979 2242.52 16810.92
5. apoeb ENSDARG00000040295 2211.28 16576.74 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. zgc:161979_1 zgc:161979_1 2152.27 16134.37
7. tmsb4x ENSDARG00000077777 2141.85 16056.26 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. apoc1l apoc1l 2138.38 16030.24
9. apobb apobb 1982.17 14859.23
10. apoa2 ENSDARG00000015866 1607.26 12048.73 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1246.23 9342.29 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. actb2 ENSDARG00000037870 1201.10 9003.98 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1031.01 7728.91 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. fabp2 ENSDARG00000006427, ENSDARG00000110230 801.89 6011.32 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
15. mt-nd2 ENSDARG00000063899 735.94 5516.93 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
16. fetub ENSDARG00000053973 704.69 5282.67 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
17. bhmt ENSDARG00000013430 676.92 5074.49 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
18. zgc:153129 zgc:153129 673.45 5048.48
19. eef1a1l1 ENSDARG00000020850 638.74 4788.28 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. mt-co2 ENSDARG00000063908 604.02 4528.00 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. mt-nd4 ENSDARG00000063917 579.72 4345.84 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
22. ctsla ENSDARG00000007836 572.78 4293.81 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
23. mt-co3 ENSDARG00000063912 496.41 3721.31 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
24. mt2 ENSDARG00000041623, ENSDARG00000113583 440.87 3304.96 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
25. AC024175.17 AC024175.17 426.98 3200.83
26. rbp4 ENSDARG00000101199 426.98 3200.83 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
27. cfl1l ENSDARG00000012972 409.63 3070.77 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
28. si:dkey-151g10.6 si:dkey-151g10.6 402.68 3018.67
29. si:dkey-150i13.2 ENSDARG00000071052 392.27 2940.63 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
30. apoa4 apoa4 364.50 2732.45
31. tfa ENSDARG00000016771 343.67 2576.30 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
32. mt-atp6 ENSDARG00000063911 340.20 2550.29 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
33. gamt ENSDARG00000070844, ENSDARG00000109945 329.78 2472.18 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
34. eef2b ENSDARG00000100371, ENSDARG00000109247 322.84 2420.15 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
35. hmga1a ENSDARG00000028335 322.84 2420.15 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
36. gatm ENSDARG00000036239 319.37 2394.14 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
37. hspa8 ENSDARG00000068992, ENSDARG00000114726 319.37 2394.14 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
38. mt-cyb ENSDARG00000063924 281.18 2107.85 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
39. aldob ENSDARG00000053684 267.30 2003.80 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
40. cyt1l ENSDARG00000036832 256.88 1925.69 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
41. APOB APOB 253.41 1899.67
42. sepp1a 243.00 1821.64 selenoprotein P, plasma, 1a
43. ppiaa ENSDARG00000009212 239.53 1795.62 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
44. zgc:92533 zgc:92533 239.53 1795.62
45. dbi ENSDARG00000026369 236.06 1769.61 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
46. slc43a2b ENSDARG00000061120, ENSDARG00000117188 229.11 1717.51 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
47. mt-nd1 ENSDARG00000063895 218.70 1639.47 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
48. pabpc1a ENSDARG00000017219 215.23 1613.46 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
49. krt8 ENSDARG00000058358, ENSDARG00000109279 208.28 1561.36 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
50. zgc:112425 zgc:112425 208.28 1561.36
51. hsp90ab1 ENSDARG00000029150 204.81 1535.35 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
52. rpl8 ENSDARG00000014867 204.81 1535.35 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
53. ssr2 ENSDARG00000005230 204.81 1535.35 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
54. ckmt1 ENSDARG00000016598, ENSDARG00000113143 197.87 1483.32 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
55. rpl10a ENSDARG00000042905, ENSDARG00000115649 187.46 1405.28 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
56. rpl26 ENSDARG00000102317 187.46 1405.28 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
57. rpl36a ENSDARG00000058105, ENSDARG00000112656 187.46 1405.28 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
58. pvalb9 ENSDARG00000071601, ENSDARG00000113946 183.98 1379.20 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
59. apoc2 ENSDARG00000092155 177.04 1327.17 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
60. ldhba ENSDARG00000019644 170.10 1275.15 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
61. rpl18a ENSDARG00000025073 170.10 1275.15 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
62. mt-co1 ENSDARG00000063905 166.63 1249.13 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
63. myh9a ENSDARG00000063295 166.63 1249.13 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
64. ptmab ENSDARG00000101766 166.63 1249.13 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
65. FP067396.1 FP067396.1 163.16 1223.12
66. pfn1 ENSDARG00000088091 163.16 1223.12 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
67. rps26l ENSDARG00000030408 163.16 1223.12 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
68. rpl21 ENSDARG00000010516, ENSDARG00000110263 159.68 1197.03 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
69. btf3 ENSDARG00000035400, ENSDARG00000116462 156.21 1171.02 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
70. npc2 ENSDARG00000090912 156.21 1171.02 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
71. ahcy ENSDARG00000005191 152.74 1145.01 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
72. mthfd1l ENSDARG00000042221, ENSDARG00000110473 149.27 1118.99 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
73. prdx5 ENSDARG00000055064 149.27 1118.99 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
74. psap ENSDARG00000013968 149.27 1118.99 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
75. rplp1 ENSDARG00000021864 145.80 1092.98 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
76. prps1a ENSDARG00000015524 142.33 1066.97 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
77. rpl36 ENSDARG00000100588 142.33 1066.97 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
78. si:dkeyp-86f7.3 si:dkeyp-86f7.3 142.33 1066.97
79. APOA4 APOA4 138.86 1040.96
80. ctsll ENSDARG00000011701, ENSDARG00000112885 135.38 1014.87 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
81. etfb ENSDARG00000009250 135.38 1014.87 electron transfer flavoprotein subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-1931]
82. rpl19 ENSDARG00000013307 135.38 1014.87 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
83. zgc:152830 ENSDARG00000079932 131.91 988.86 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
84. zgc:158463 ENSDARG00000089382 131.91 988.86 zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
85. rps14 ENSDARG00000036629 128.44 962.84 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
86. apoea ENSDARG00000102004 124.97 936.83 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
87. ctsba ENSDARG00000055120 124.97 936.83 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
88. paics ENSDARG00000033539 124.97 936.83 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
89. rpl23 ENSDARG00000053457 124.97 936.83 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
90. rpl9 ENSDARG00000037350, ENSDARG00000112384 124.97 936.83 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
91. rps19 ENSDARG00000030602 124.97 936.83 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
92. RPL29 ENSDARG00000077717 121.50 910.82 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
93. atp1b1b ENSDARG00000076833 121.50 910.82 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
94. rpl11 ENSDARG00000043509 121.50 910.82 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
95. rps27a ENSDARG00000032725, ENSDARG00000114059 121.50 910.82 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
96. zgc:153867 121.50 910.82 zgc:153867, transcript variant X2
97. a2ml ENSDARG00000056314 118.03 884.81 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
98. col1a1b ENSDARG00000035809 118.03 884.81 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
99. icn ENSDARG00000009978 118.03 884.81 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
100. myl6 ENSDARG00000008494, ENSDARG00000115496 118.03 884.81 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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