Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s19.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 29056.46 217821.53
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4400.11 32985.39 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 3098.46 23227.58
4. apoa1b ENSDARG00000101324 2396.99 17969.02 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. zgc:161979_1 zgc:161979_1 2239.44 16787.94
6. apoa2 ENSDARG00000015866 2153.16 16141.15 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. zgc:161979 zgc:161979 2119.40 15888.07
8. apobb apobb 1988.11 14903.85
9. apoeb ENSDARG00000040295 1886.83 14144.61 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
10. tmsb4x ENSDARG00000077777 1620.50 12148.07 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1339.16 10039.00 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. actb2 ENSDARG00000037870 1170.36 8773.59 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 907.78 6805.17 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. mt-nd2 ENSDARG00000063899 866.52 6495.86 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
15. mt-co2 ENSDARG00000063908 772.74 5792.84 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
16. mt-co3 ENSDARG00000063912 753.98 5652.21 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. zgc:153129 zgc:153129 735.23 5511.65
18. eef1a1l1 ENSDARG00000020850 663.95 4977.30 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. mt-nd4 ENSDARG00000063917 637.70 4780.51 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
20. mt-atp6 ENSDARG00000063911 633.95 4752.40 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
21. fabp2 ENSDARG00000006427, ENSDARG00000110230 622.69 4667.99 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
22. bhmt ENSDARG00000013430 607.69 4555.54 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
23. ctsla ENSDARG00000007836 600.19 4499.32 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
24. fetub ENSDARG00000053973 528.91 3964.97 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
25. rbp4 ENSDARG00000101199 510.16 3824.41 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
26. apoa4 apoa4 465.14 3486.92
27. mt2 ENSDARG00000041623, ENSDARG00000113583 397.62 2980.76 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
28. AC024175.17 AC024175.17 382.62 2868.31
29. eef2b ENSDARG00000100371, ENSDARG00000109247 356.36 2671.45 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
30. mt-cyb ENSDARG00000063924 352.61 2643.34 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
31. si:dkey-150i13.2 ENSDARG00000071052 352.61 2643.34 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
32. mt-nd1 ENSDARG00000063895 348.86 2615.23 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
33. zgc:92533 zgc:92533 345.11 2587.11
34. tfa ENSDARG00000016771 333.85 2502.70 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
35. sepp1a 326.35 2446.48 selenoprotein P, plasma, 1a
36. hmga1a ENSDARG00000028335 322.60 2418.37 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. si:dkey-151g10.6 si:dkey-151g10.6 303.84 2277.73
38. cfl1l ENSDARG00000012972 300.09 2249.62 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
39. slc43a2b ENSDARG00000061120, ENSDARG00000117188 288.84 2165.29 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
40. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 277.59 2080.95 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
41. zgc:112425 zgc:112425 255.08 1912.21
42. APOB APOB 247.58 1855.98
43. hspa8 ENSDARG00000068992, ENSDARG00000114726 236.32 1771.57 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
44. cyt1l ENSDARG00000036832 232.57 1743.46 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
45. gatm ENSDARG00000036239 228.82 1715.35 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
46. rpl23 ENSDARG00000053457 228.82 1715.35 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
47. rpl36a ENSDARG00000058105, ENSDARG00000112656 221.32 1659.12 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
48. dbi ENSDARG00000026369 210.06 1574.71 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
49. gamt ENSDARG00000070844, ENSDARG00000109945 210.06 1574.71 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
50. ppiaa ENSDARG00000009212 210.06 1574.71 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
51. hsp90ab1 ENSDARG00000029150 206.31 1546.60 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
52. mthfd1l ENSDARG00000042221, ENSDARG00000110473 195.06 1462.27 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
53. rpl10a ENSDARG00000042905, ENSDARG00000115649 195.06 1462.27 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
54. APOA4 APOA4 187.56 1406.04
55. mt-co1 ENSDARG00000063905 183.81 1377.93 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
56. pvalb9 ENSDARG00000071601, ENSDARG00000113946 183.81 1377.93 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
57. eif5a ENSDARG00000017235 180.06 1349.82 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
58. rpl21 ENSDARG00000010516, ENSDARG00000110263 180.06 1349.82 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
59. btf3 ENSDARG00000035400, ENSDARG00000116462 176.30 1321.63 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
60. rpl11 ENSDARG00000043509 176.30 1321.63 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
61. rpl18a ENSDARG00000025073 176.30 1321.63 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
62. rpl26 ENSDARG00000102317 176.30 1321.63 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
63. rps14 ENSDARG00000036629 172.55 1293.52 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
64. FP067396.1 FP067396.1 168.80 1265.41
65. krt8 ENSDARG00000058358, ENSDARG00000109279 168.80 1265.41 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
66. ssr2 ENSDARG00000005230 168.80 1265.41 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
67. ctsll ENSDARG00000011701, ENSDARG00000112885 161.30 1209.18 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
68. npc2 ENSDARG00000090912 161.30 1209.18 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
69. pabpc1a ENSDARG00000017219 161.30 1209.18 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
70. rps27a ENSDARG00000032725, ENSDARG00000114059 161.30 1209.18 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
71. apoc2 ENSDARG00000092155 157.55 1181.07 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
72. prdx5 ENSDARG00000055064 157.55 1181.07 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
73. rpl8 ENSDARG00000014867 157.55 1181.07 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
74. zgc:165571 zgc:165571 153.80 1152.96
75. rplp1 ENSDARG00000021864 150.05 1124.85 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
76. zgc:136410 ENSDARG00000102241 150.05 1124.85 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
77. pfn1 ENSDARG00000088091 146.30 1096.74 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
78. ahcy ENSDARG00000005191 142.54 1068.55 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
79. atp6v0ca ENSDARG00000057853 142.54 1068.55 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
80. ldhba ENSDARG00000019644 138.79 1040.44 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
81. myl6 ENSDARG00000008494, ENSDARG00000115496 138.79 1040.44 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
82. rpl19 ENSDARG00000013307 138.79 1040.44 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
83. rps2 ENSDARG00000077291 138.79 1040.44 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
84. aldob ENSDARG00000053684 131.29 984.21 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
85. krt5 ENSDARG00000058371, ENSDARG00000112017 131.29 984.21 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
86. myh9a ENSDARG00000063295 131.29 984.21 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
87. psap ENSDARG00000013968 131.29 984.21 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
88. ptmab ENSDARG00000101766 131.29 984.21 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
89. rps15 ENSDARG00000070849, ENSDARG00000110979 131.29 984.21 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
90. rps9 ENSDARG00000011405, ENSDARG00000113248 131.29 984.21 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
91. zgc:152830 ENSDARG00000079932 131.29 984.21 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
92. capns1b ENSDARG00000013804 127.54 956.10 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
93. ckmt1 ENSDARG00000016598, ENSDARG00000113143 127.54 956.10 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
94. cycsb ENSDARG00000044562 127.54 956.10 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
95. rpl36 ENSDARG00000100588 127.54 956.10 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
96. anxa1c ENSDARG00000104359 123.79 927.99 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
97. nt5c3a ENSDARG00000058597 123.79 927.99 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
98. rpl7 ENSDARG00000007320 123.79 927.99 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
99. rps15a ENSDARG00000010160 123.79 927.99 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
100. rps24 ENSDARG00000039347 123.79 927.99 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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