Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s18.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 27317.53 204784.11
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5140.84 38537.98 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2305.29 17281.46 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. zgc:161979 zgc:161979 2282.73 17112.34
5. apoc1l apoc1l 2011.96 15082.53
6. apoeb ENSDARG00000040295 1891.62 14180.41 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
7. zgc:161979_1 zgc:161979_1 1854.01 13898.47
8. apoa2 ENSDARG00000015866 1722.39 12911.79 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. tmsb4x ENSDARG00000077777 1669.74 12517.10 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apobb apobb 1609.57 12066.04
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1278.63 9585.17 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. actb2 ENSDARG00000037870 1075.55 8062.79 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. mt-nd2 ENSDARG00000063899 958.97 7188.86 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. actb1 ENSDARG00000037746, ENSDARG00000113649 940.17 7047.92 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. mt-co2 ENSDARG00000063908 733.33 5497.36 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
16. fabp2 ENSDARG00000006427, ENSDARG00000110230 729.57 5469.17 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
17. bhmt ENSDARG00000013430 725.81 5440.99 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
18. mt-nd4 ENSDARG00000063917 710.77 5328.24 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
19. zgc:153129 zgc:153129 612.99 4595.24
20. eef1a1l1 ENSDARG00000020850 601.71 4510.68 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. mt-co3 ENSDARG00000063912 552.82 4144.18 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. mt-atp6 ENSDARG00000063911 545.30 4087.81 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
23. si:dkey-150i13.2 ENSDARG00000071052 537.78 4031.43 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
24. fetub ENSDARG00000053973 530.26 3975.06 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
25. ctsla ENSDARG00000007836 507.69 3805.87 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
26. mt2 ENSDARG00000041623, ENSDARG00000113583 462.56 3467.55 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
27. si:dkey-151g10.6 si:dkey-151g10.6 451.28 3382.99
28. rbp4 ENSDARG00000101199 402.39 3016.49 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
29. hmga1a ENSDARG00000028335 383.59 2875.56 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
30. eef2b ENSDARG00000100371, ENSDARG00000109247 376.07 2819.18 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. gamt ENSDARG00000070844, ENSDARG00000109945 364.79 2734.62 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
32. mt-nd1 ENSDARG00000063895 353.50 2649.99 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
33. rpl26 ENSDARG00000102317 334.70 2509.06 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
34. ppiaa ENSDARG00000009212 304.61 2283.49 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
35. mt-cyb ENSDARG00000063924 300.85 2255.30 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
36. tfa ENSDARG00000016771 297.09 2227.12 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
37. hspa8 ENSDARG00000068992, ENSDARG00000114726 293.33 2198.93 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
38. rpl21 ENSDARG00000010516, ENSDARG00000110263 285.81 2142.56 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
39. apoa4 apoa4 282.05 2114.37
40. zgc:92533 zgc:92533 274.53 2058.00
41. slc43a2b ENSDARG00000061120, ENSDARG00000117188 270.77 2029.81 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
42. zgc:112425 zgc:112425 267.01 2001.62
43. cfl1l ENSDARG00000012972 263.25 1973.44 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
44. hsp90ab1 ENSDARG00000029150 255.73 1917.06 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
45. mt-co1 ENSDARG00000063905 255.73 1917.06 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
46. rpl23 ENSDARG00000053457 255.73 1917.06 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
47. sepp1a 255.73 1917.06 selenoprotein P, plasma, 1a
48. prdx5 ENSDARG00000055064 251.97 1888.88 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
49. rpl18a ENSDARG00000025073 248.20 1860.62 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
50. AC024175.17 AC024175.17 236.92 1776.06
51. btf3 ENSDARG00000035400, ENSDARG00000116462 233.16 1747.87 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
52. cyt1l ENSDARG00000036832 233.16 1747.87 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
53. rpl8 ENSDARG00000014867 233.16 1747.87 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
54. rps27a ENSDARG00000032725, ENSDARG00000114059 225.64 1691.50 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
55. rpl10a ENSDARG00000042905, ENSDARG00000115649 218.12 1635.12 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
56. gatm ENSDARG00000036239 214.36 1606.94 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
57. APOB APOB 210.60 1578.75
58. apoc2 ENSDARG00000092155 210.60 1578.75 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
59. rpl27 ENSDARG00000015128 210.60 1578.75 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
60. rpl9 ENSDARG00000037350, ENSDARG00000112384 210.60 1578.75 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
61. rps23 ENSDARG00000021838 210.60 1578.75 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
62. rpl19 ENSDARG00000013307 206.84 1550.56 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
63. rpl36 ENSDARG00000100588 206.84 1550.56 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
64. rpl7 ENSDARG00000007320 206.84 1550.56 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
65. mthfd1l ENSDARG00000042221, ENSDARG00000110473 188.03 1409.55 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
66. pfn1 ENSDARG00000088091 188.03 1409.55 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
67. rpl36a ENSDARG00000058105, ENSDARG00000112656 184.27 1381.37 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
68. aldob ENSDARG00000053684 180.51 1353.18 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
69. psap ENSDARG00000013968 172.99 1296.81 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
70. si:dkeyp-86f7.3 si:dkeyp-86f7.3 169.23 1268.62
71. rps14 ENSDARG00000036629 165.47 1240.44 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
72. rps9 ENSDARG00000011405, ENSDARG00000113248 165.47 1240.44 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
73. ahcy ENSDARG00000005191 161.71 1212.25 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
74. rplp1 ENSDARG00000021864 161.71 1212.25 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
75. dbi ENSDARG00000026369 157.95 1184.06 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
76. eif5a ENSDARG00000017235 157.95 1184.06 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
77. rps26l ENSDARG00000030408 154.19 1155.88 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
78. myh9a ENSDARG00000063295 150.43 1127.69 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
79. pcna ENSDARG00000054155 150.43 1127.69 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
80. hdlbp hdlbp 146.67 1099.50
81. npc2 ENSDARG00000090912 146.67 1099.50 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
82. ckmt1 ENSDARG00000016598, ENSDARG00000113143 142.91 1071.32 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
83. zgc:165571 zgc:165571 142.91 1071.32
84. myl6 ENSDARG00000008494, ENSDARG00000115496 139.14 1043.05 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
85. rpl18 ENSDARG00000029533 139.14 1043.05 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
86. rpl39 ENSDARG00000036316, ENSDARG00000117167 139.14 1043.05 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
87. rps12 ENSDARG00000036875, ENSDARG00000115157 139.14 1043.05 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
88. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 135.38 1014.87 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
89. rpl11 ENSDARG00000043509 135.38 1014.87 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
90. ctsll ENSDARG00000011701, ENSDARG00000112885 131.62 986.68 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
91. APOA4 APOA4 127.86 958.49
92. ldhba ENSDARG00000019644 127.86 958.49 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
93. prps1a ENSDARG00000015524 127.86 958.49 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
94. rps2 ENSDARG00000077291 127.86 958.49 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
95. rps5 ENSDARG00000043453 127.86 958.49 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
96. flna ENSDARG00000074201 124.10 930.31 filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
97. rpl6 ENSDARG00000058451 124.10 930.31 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
98. cd9b ENSDARG00000016691 120.34 902.12 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
99. rps19 ENSDARG00000030602 120.34 902.12 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
100. si:dkey-126g1.9 ENSDARG00000093702 120.34 902.12 si:dkey-126g1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-9862]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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