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Experiment Zebrafish_28hpf_trunk1, section s17.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 31189.40 233781.85
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3173.11 23784.22 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 1745.99 13087.16 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 1537.03 11520.89
5. zgc:161979 zgc:161979 1437.96 10778.31
6. apobb apobb 1343.54 10070.58
7. tmsb4x ENSDARG00000077777 1311.04 9826.97 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. apoa2 ENSDARG00000015866 1292.46 9687.70 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. apoeb ENSDARG00000040295 1281.63 9606.53 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
10. zgc:161979_1 zgc:161979_1 1281.63 9606.53
11. mt-nd2 ENSDARG00000063899 1015.40 7610.99 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. actb2 ENSDARG00000037870 970.51 7274.51 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. mt-nd4 ENSDARG00000063917 832.75 6241.92 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. mt-co2 ENSDARG00000063908 825.01 6183.91 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
15. apoa1a ENSDARG00000012076, ENSDARG00000110395 818.82 6137.51 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
16. actb1 ENSDARG00000037746, ENSDARG00000113649 733.69 5499.41 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
17. mt-atp6 ENSDARG00000063911 698.09 5232.57 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
18. mt-co3 ENSDARG00000063912 665.58 4988.89 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. eef1a1l1 ENSDARG00000020850 642.36 4814.84 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. mt-nd1 ENSDARG00000063895 566.52 4246.38 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. si:dkey-150i13.2 ENSDARG00000071052 527.82 3956.30 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
22. bhmt ENSDARG00000013430 516.99 3875.13 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
23. si:dkey-151g10.6 si:dkey-151g10.6 464.36 3480.64
24. ctsla ENSDARG00000007836 419.47 3144.16 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
25. fabp2 ENSDARG00000006427, ENSDARG00000110230 414.83 3109.38 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
26. zgc:153129 zgc:153129 413.28 3097.76
27. eef2b ENSDARG00000100371, ENSDARG00000109247 396.25 2970.11 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 379.23 2842.54 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. mt-cyb ENSDARG00000063924 379.23 2842.54 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. hmga1a ENSDARG00000028335 369.94 2772.91 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
31. fetub ENSDARG00000053973 357.56 2680.11 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
32. ppiaa ENSDARG00000009212 351.36 2633.64 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
33. rbp4 ENSDARG00000101199 349.82 2622.09 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
34. mt2 ENSDARG00000041623, ENSDARG00000113583 342.08 2564.08 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
35. rpl18a ENSDARG00000025073 311.12 2332.02 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. zgc:112425 zgc:112425 303.38 2274.00
37. atp1b1a ENSDARG00000013144 297.19 2227.60 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
38. rpl10a ENSDARG00000042905, ENSDARG00000115649 292.55 2192.82 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
39. hsp90ab1 ENSDARG00000029150 289.45 2169.59 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
40. rpl23 ENSDARG00000053457 284.81 2134.81 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
41. rpl26 ENSDARG00000102317 267.78 2007.16 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
42. zgc:66286 zgc:66286 267.78 2007.16
43. rpl8 ENSDARG00000014867 258.49 1937.53 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
44. apoa4 apoa4 252.30 1891.13
45. rpl21 ENSDARG00000010516, ENSDARG00000110263 250.75 1879.51 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
46. AC024175.17 AC024175.17 243.01 1821.49
47. rps14 ENSDARG00000036629 241.47 1809.95 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
48. mt-co1 ENSDARG00000063905 229.08 1717.08 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
49. btf3 ENSDARG00000035400, ENSDARG00000116462 227.54 1705.54 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
50. rpl36 ENSDARG00000100588 224.44 1682.30 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
51. tfa ENSDARG00000016771 221.34 1659.07 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
52. slc43a2b ENSDARG00000061120, ENSDARG00000117188 213.60 1601.05 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
53. ATP5B 204.32 1531.49 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
54. rps23 ENSDARG00000021838 204.32 1531.49 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
55. cfl1l ENSDARG00000012972 202.77 1519.87 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
56. myl10 ENSDARG00000062592 198.13 1485.09 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
57. rpl36a ENSDARG00000058105, ENSDARG00000112656 198.13 1485.09 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
58. ptmab ENSDARG00000101766 193.48 1450.24 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
59. fabp3 ENSDARG00000023290 191.93 1438.62 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
60. dbi ENSDARG00000026369 190.39 1427.08 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
61. rpl27 ENSDARG00000015128 190.39 1427.08 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
62. rps27a ENSDARG00000032725, ENSDARG00000114059 185.74 1392.22 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
63. eif5a ENSDARG00000017235 184.20 1380.68 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
64. tpm3 ENSDARG00000005162 184.20 1380.68 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
65. gatm ENSDARG00000036239 182.65 1369.06 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
66. rps2 ENSDARG00000077291 181.10 1357.44 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
67. zgc:92533 zgc:92533 176.46 1322.67
68. cyt1l ENSDARG00000036832 173.36 1299.43 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
69. pabpc1a ENSDARG00000017219 173.36 1299.43 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
70. sepp1a 171.81 1287.81 selenoprotein P, plasma, 1a
71. ckmb ENSDARG00000040565 167.17 1253.03 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
72. rplp1 ENSDARG00000021864 167.17 1253.03 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
73. rpl9 ENSDARG00000037350, ENSDARG00000112384 165.62 1241.41 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
74. rps9 ENSDARG00000011405, ENSDARG00000113248 165.62 1241.41 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
75. gamt ENSDARG00000070844, ENSDARG00000109945 164.07 1229.80 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
76. rpl11 ENSDARG00000043509 164.07 1229.80 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
77. rps26l ENSDARG00000030408 164.07 1229.80 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
78. APOB APOB 157.88 1183.40
79. col1a1b ENSDARG00000035809 157.88 1183.40 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
80. actc1b ENSDARG00000099197 156.33 1171.78 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
81. AL954137.2 ENSDARG00000114408 150.14 1125.38
82. rps15 ENSDARG00000070849, ENSDARG00000110979 150.14 1125.38 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
83. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 148.59 1113.76 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
84. pfn1 ENSDARG00000088091 148.59 1113.76 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
85. si:dkeyp-86f7.3 si:dkeyp-86f7.3 148.59 1113.76
86. ldhba ENSDARG00000019644 147.05 1102.22 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
87. rpl7 ENSDARG00000007320 147.05 1102.22 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. rpl18 ENSDARG00000029533 145.50 1090.60 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
89. rps4x ENSDARG00000014690 145.50 1090.60 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
90. rpsa ENSDARG00000019181 142.40 1067.37 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
91. ssr2 ENSDARG00000005230 140.86 1055.82 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
92. apoc2 ENSDARG00000092155 139.31 1044.21 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
93. krt8 ENSDARG00000058358, ENSDARG00000109279 137.76 1032.59 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
94. rpl19 ENSDARG00000013307 137.76 1032.59 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
95. rps15a ENSDARG00000010160 137.76 1032.59 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
96. rps6 ENSDARG00000019778 137.76 1032.59 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
97. tpma ENSDARG00000033683 137.76 1032.59 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
98. rps12 ENSDARG00000036875, ENSDARG00000115157 131.57 986.19 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
99. rps20 ENSDARG00000036044 131.57 986.19 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
100. mt-nd3 ENSDARG00000063914 128.47 962.95 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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