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Experiment Zebrafish_28hpf_trunk1, section s16.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 31199.94 233866.32
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2583.31 19363.79 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1201.03 9002.60 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tmsb4x ENSDARG00000077777 1101.73 8258.27 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. apoc1l apoc1l 1049.72 7868.42
6. mt-co2 ENSDARG00000063908 1027.65 7702.99 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. apoa1b ENSDARG00000101324 1024.50 7679.38 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. apoeb ENSDARG00000040295 955.15 7159.55 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
9. zgc:161979 zgc:161979 903.14 6769.69
10. actb2 ENSDARG00000037870 901.56 6757.85 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. apoa2 ENSDARG00000015866 870.04 6521.58 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
12. apobb apobb 859.00 6438.83
13. mt-co3 ENSDARG00000063912 811.72 6084.43 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. mt-atp6 ENSDARG00000063911 806.99 6048.98 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
15. zgc:161979_1 zgc:161979_1 780.20 5848.17
16. eef1a1l1 ENSDARG00000020850 777.04 5824.48 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. si:dkey-150i13.2 ENSDARG00000071052 728.18 5458.24 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
18. actb1 ENSDARG00000037746, ENSDARG00000113649 638.34 4784.82 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
19. mt-nd4 ENSDARG00000063917 589.48 4418.58 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
20. mt-nd1 ENSDARG00000063895 543.77 4075.95 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. apoa1a ENSDARG00000012076, ENSDARG00000110395 542.20 4064.18 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
22. si:dkey-151g10.6 si:dkey-151g10.6 520.13 3898.75
23. tpma ENSDARG00000033683 488.61 3662.49 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
24. eef2b ENSDARG00000100371, ENSDARG00000109247 455.51 3414.38 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
25. ckmb ENSDARG00000040565 409.80 3071.75 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
26. mt-cyb ENSDARG00000063924 397.19 2977.23 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. ppiaa ENSDARG00000009212 381.43 2859.10 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 368.82 2764.58 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. ckma ENSDARG00000035327, ENSDARG00000114671 357.79 2681.90 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
30. rpl23 ENSDARG00000053457 357.79 2681.90 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
31. rpl10a ENSDARG00000042905, ENSDARG00000115649 338.87 2540.08 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
32. rpl21 ENSDARG00000010516, ENSDARG00000110263 338.87 2540.08 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
33. actc1b ENSDARG00000099197 330.99 2481.01 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
34. fabp2 ENSDARG00000006427, ENSDARG00000110230 326.26 2445.56 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
35. bhmt ENSDARG00000013430 316.81 2374.72 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
36. atp1b1a ENSDARG00000013144 315.23 2362.88 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
37. hmga1a ENSDARG00000028335 315.23 2362.88 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
38. rpl26 ENSDARG00000102317 313.65 2351.04 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
39. ctsla ENSDARG00000007836 307.35 2303.81 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
40. zgc:66286 zgc:66286 305.77 2291.97
41. btf3 ENSDARG00000035400, ENSDARG00000116462 301.05 2256.59 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. rpl18a ENSDARG00000025073 301.05 2256.59 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
43. rpl8 ENSDARG00000014867 285.28 2138.38 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
44. AC024175.17 AC024175.17 283.71 2126.61
45. zgc:112425 zgc:112425 267.95 2008.48
46. atp2a1 ENSDARG00000020574 264.79 1984.79 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
47. ATP5B 263.22 1973.03 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
48. rbp4 ENSDARG00000101199 258.49 1937.57 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
49. zgc:153129 zgc:153129 253.76 1902.12
50. rpl9 ENSDARG00000037350, ENSDARG00000112384 247.46 1854.89 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
51. myl10 ENSDARG00000062592 245.88 1843.05 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
52. rps2 ENSDARG00000077291 245.88 1843.05 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
53. mt2 ENSDARG00000041623, ENSDARG00000113583 242.73 1819.44 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
54. rpl36a ENSDARG00000058105, ENSDARG00000112656 242.73 1819.44 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
55. rps15a ENSDARG00000010160 226.97 1701.31 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
56. hsp90ab1 ENSDARG00000029150 219.09 1642.24 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
57. rpl11 ENSDARG00000043509 214.36 1606.78 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
58. rps26l ENSDARG00000030408 212.78 1594.94 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
59. rpl7 ENSDARG00000007320 211.20 1583.10 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
60. rplp1 ENSDARG00000021864 211.20 1583.10 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
61. mylz3 ENSDARG00000017441 206.48 1547.72 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
62. rps23 ENSDARG00000021838 206.48 1547.72 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
63. rpl19 ENSDARG00000013307 203.32 1524.03 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
64. fabp3 ENSDARG00000023290 201.75 1512.26 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
65. rpl27 ENSDARG00000015128 197.02 1476.81 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
66. rps27a ENSDARG00000032725, ENSDARG00000114059 197.02 1476.81 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
67. rps14 ENSDARG00000036629 193.87 1453.20 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
68. fetub ENSDARG00000053973 190.71 1429.51 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
69. tpm3 ENSDARG00000005162 187.56 1405.90 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
70. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 185.99 1394.13 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
71. slc43a2b ENSDARG00000061120, ENSDARG00000117188 181.26 1358.68 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
72. pabpc1a ENSDARG00000017219 179.68 1346.83 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
73. zgc:92533 zgc:92533 176.53 1323.22
74. mt-co1 ENSDARG00000063905 174.95 1311.38 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
75. gatm ENSDARG00000036239 171.80 1287.77 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
76. rpl6 ENSDARG00000058451 170.22 1275.92 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
77. si:dkeyp-86f7.3 si:dkeyp-86f7.3 170.22 1275.92
78. cfl1l ENSDARG00000012972 168.65 1264.15 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
79. rpl14 ENSDARG00000103433 168.65 1264.15 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
80. rpl5b ENSDARG00000015862, ENSDARG00000109661 167.07 1252.31 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
81. eif5a ENSDARG00000017235 163.92 1228.70 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
82. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 163.92 1228.70 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
83. apoa4 apoa4 162.34 1216.86
84. rps6 ENSDARG00000019778 162.34 1216.86 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
85. AL954137.2 ENSDARG00000114408 160.77 1205.09
86. rps27.1 ENSDARG00000023298 160.77 1205.09 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
87. rps9 ENSDARG00000011405, ENSDARG00000113248 160.77 1205.09 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
88. tnnc2 ENSDARG00000070835, ENSDARG00000111155 160.77 1205.09 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
89. rps4x ENSDARG00000014690 159.19 1193.25 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
90. hsp90aa1.1 ENSDARG00000010478 157.62 1181.48 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
91. acta1a ENSDARG00000036371 156.04 1169.63 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
92. rpl36 ENSDARG00000100588 156.04 1169.63 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
93. tnni2b.1 ENSDARG00000035958 154.46 1157.79 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
94. gamt ENSDARG00000070844, ENSDARG00000109945 152.89 1146.02 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
95. atp5g3b 151.31 1134.18 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
96. col1a1b ENSDARG00000035809 151.31 1134.18 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
97. h1f0 ENSDARG00000038559 151.31 1134.18 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
98. krt8 ENSDARG00000058358, ENSDARG00000109279 149.73 1122.34 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
99. rps12 ENSDARG00000036875, ENSDARG00000115157 149.73 1122.34 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
100. smyhc1 ENSDARG00000099959, ENSDARG00000115916 149.73 1122.34 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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