Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_trunk1, section s12.

Sample reads: 133,410. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 29711.20 222705.66
2. tpma ENSDARG00000033683 2476.33 18561.78 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 1604.70 12028.32 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. mt-nd2 ENSDARG00000063899 1463.48 10969.78 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-nd4 ENSDARG00000063917 1315.39 9859.74 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. mt-co2 ENSDARG00000063908 1181.57 8856.67 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. actc1b ENSDARG00000099197 1154.60 8654.51 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
8. krt4 ENSDARG00000017624, ENSDARG00000115790 1153.54 8646.57 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
9. ckma ENSDARG00000035327, ENSDARG00000114671 1072.62 8040.02 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
10. AC024175.17 AC024175.17 988.52 7409.63
11. mt-atp6 ENSDARG00000063911 983.23 7369.98 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 953.61 7147.96 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
13. mt-co3 ENSDARG00000063912 943.57 7072.70 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. mt-nd1 ENSDARG00000063895 828.26 6208.37 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
15. atp2a1 ENSDARG00000020574 822.45 6164.82 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. mylz3 ENSDARG00000017441 819.27 6140.99 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. eef1a1l1 ENSDARG00000020850 814.51 6105.31 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. si:dkey-151g10.6 si:dkey-151g10.6 683.34 5122.10
19. myhz1.3 ENSDARG00000067997 668.54 5011.16 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
20. tnnc2 ENSDARG00000070835, ENSDARG00000111155 659.54 4943.70 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
21. ttna ttna 635.74 4765.30
22. ttnb ttnb 628.34 4709.84
23. actb2 ENSDARG00000037870 576.51 4321.33 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
24. acta1b ENSDARG00000055618 534.19 4004.12 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
25. ppiaa ENSDARG00000009212 518.33 3885.24 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
26. mt-cyb ENSDARG00000063924 503.52 3774.23 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. rpl10a ENSDARG00000042905, ENSDARG00000115649 495.58 3714.71 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
28. acta1a ENSDARG00000036371 471.25 3532.34 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
29. rpl23 ENSDARG00000053457 469.14 3516.52 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
30. eef2b ENSDARG00000100371, ENSDARG00000109247 468.08 3508.58 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. myl1 ENSDARG00000014196 467.02 3500.63 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
32. tmsb4x ENSDARG00000077777 465.96 3492.69 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
33. zgc:66286 zgc:66286 462.79 3468.93
34. pvalb2 ENSDARG00000002768, ENSDARG00000114085 438.99 3290.53 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
35. rpl8 ENSDARG00000014867 427.88 3207.25 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
36. hspa8 ENSDARG00000068992, ENSDARG00000114726 426.30 3195.41 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
37. myhz2 ENSDARG00000012944 425.77 3191.44 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
38. rpl21 ENSDARG00000010516, ENSDARG00000110263 422.07 3163.70 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
39. btf3 ENSDARG00000035400, ENSDARG00000116462 407.26 3052.69 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
40. aldoab ENSDARG00000034470 378.70 2838.61 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
41. tnni2b.1 ENSDARG00000035958 368.12 2759.31 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
42. rpl36a ENSDARG00000058105, ENSDARG00000112656 366.53 2747.39 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
43. rpl26 ENSDARG00000102317 355.95 2668.09 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
44. actb1 ENSDARG00000037746, ENSDARG00000113649 344.85 2584.89 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
45. tnnt3a ENSDARG00000030270 344.32 2580.91 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
46. rpl9 ENSDARG00000037350, ENSDARG00000112384 339.56 2545.23 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
47. myl10 ENSDARG00000062592 337.97 2533.32 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
48. rpl18a ENSDARG00000025073 326.86 2450.04 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
49. si:dkey-150i13.2 ENSDARG00000071052 325.28 2438.19 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
50. mt-co1 ENSDARG00000063905 321.57 2410.39 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
51. rps27a ENSDARG00000032725, ENSDARG00000114059 302.00 2263.70 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
52. zgc:112425 zgc:112425 300.42 2251.85
53. hsp90aa1.1 ENSDARG00000010478 295.13 2212.20 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
54. rps14 ENSDARG00000036629 294.07 2204.25 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
55. fabp3 ENSDARG00000023290 285.61 2140.84 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
56. rps23 ENSDARG00000021838 281.91 2113.11 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
57. rpl19 ENSDARG00000013307 279.79 2097.22 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
58. rplp1 ENSDARG00000021864 277.67 2081.33 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
59. zgc:158463 ENSDARG00000089382 277.67 2081.33 zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
60. rps26l ENSDARG00000030408 274.50 2057.56 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
61. rpl27 ENSDARG00000015128 264.45 1982.23 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
62. eif5a ENSDARG00000017235 263.92 1978.26 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
63. tnni2a.4 ENSDARG00000029069 254.93 1910.87 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
64. rpl7 ENSDARG00000007320 250.70 1879.17 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
65. rpl36 ENSDARG00000100588 243.82 1827.60 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
66. tpm3 ENSDARG00000005162 242.24 1815.75 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
67. rps2 ENSDARG00000077291 241.71 1811.78 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
68. rps9 ENSDARG00000011405, ENSDARG00000113248 241.71 1811.78 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
69. rpl11 ENSDARG00000043509 238.01 1784.05 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
70. hmga1a ENSDARG00000028335 228.49 1712.69 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
71. rplp0 ENSDARG00000051783 228.49 1712.69 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
72. rps12 ENSDARG00000036875, ENSDARG00000115157 228.49 1712.69 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
73. rpl18 ENSDARG00000029533 224.78 1684.88 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
74. col2a1a ENSDARG00000069093, ENSDARG00000111202 221.08 1657.15 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
75. ATP5B 216.85 1625.44 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
76. rpl15 ENSDARG00000009285 213.15 1597.70 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
77. rps6 ENSDARG00000019778 211.03 1581.81 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
78. rpl6 ENSDARG00000058451 209.45 1569.97 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
79. rps20 ENSDARG00000036044 208.39 1562.02 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
80. rpsa ENSDARG00000019181 205.74 1542.16 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
81. tnnt2c ENSDARG00000032242 205.21 1538.19 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
82. rps4x ENSDARG00000014690 196.75 1474.78 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
83. rps15 ENSDARG00000070849, ENSDARG00000110979 191.99 1439.10 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
84. tnnt3b ENSDARG00000068457 191.46 1435.12 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
85. rps19 ENSDARG00000030602 190.41 1427.25 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
86. rpl5b ENSDARG00000015862, ENSDARG00000109661 189.35 1419.31 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
87. tmem38a ENSDARG00000024047 188.82 1415.33 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
88. smyhc1 ENSDARG00000099959, ENSDARG00000115916 188.29 1411.36 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
89. h1f0 ENSDARG00000038559 183.00 1371.71 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
90. rps5 ENSDARG00000043453 180.36 1351.92 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
91. gapdh ENSDARG00000043457 176.65 1324.11 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
92. rps29 ENSDARG00000041232 176.65 1324.11 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
93. col1a1b ENSDARG00000035809 176.13 1320.21 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
94. nme2b.2 ENSDARG00000099420 176.13 1320.21 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
95. faua ENSDARG00000099022 175.60 1316.24 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
96. lama2 ENSDARG00000099390 169.25 1268.64 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
97. si:ch211-226o13.2 168.72 1264.67 si:ch211-226o13.2
98. RPL29 ENSDARG00000077717 167.66 1256.73 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
99. desma ENSDARG00000058656 166.60 1248.78 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
100. rpl39 ENSDARG00000036316, ENSDARG00000117167 166.60 1248.78 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA