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Experiment Zebrafish_28hpf_trunk1, section s11.

Sample reads: 133,416. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 36749.81 275452.34
2. tpma ENSDARG00000033683 2018.49 15129.27 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. mt-nd2 ENSDARG00000063899 1785.37 13381.96 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. mt-co2 ENSDARG00000063908 1707.66 12799.49 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. ckmb ENSDARG00000040565 1491.60 11180.05 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-nd4 ENSDARG00000063917 1398.73 10483.96 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
7. mt-co3 ENSDARG00000063912 1192.14 8935.50 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
8. krt4 ENSDARG00000017624, ENSDARG00000115790 1049.99 7870.03 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
9. mt-atp6 ENSDARG00000063911 1013.98 7600.13 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. mt-nd1 ENSDARG00000063895 871.84 6534.74 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
11. si:dkey-151g10.6 si:dkey-151g10.6 814.98 6108.55
12. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 803.61 6023.33 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
13. actc1b ENSDARG00000099197 797.92 5980.68 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
14. ckma ENSDARG00000035327, ENSDARG00000114671 763.80 5724.94 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
15. tnnc2 ENSDARG00000070835, ENSDARG00000111155 724.00 5426.63 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
16. rpl23 ENSDARG00000053457 661.46 4957.87 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
17. ppiaa ENSDARG00000009212 655.77 4915.22 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. mylz3 ENSDARG00000017441 638.72 4787.42 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
19. atp2a1 ENSDARG00000020574 623.55 4673.72 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
20. rpl10a ENSDARG00000042905, ENSDARG00000115649 623.55 4673.72 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
21. eef1a1l1 ENSDARG00000020850 600.81 4503.28 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. zgc:66286 zgc:66286 570.48 4275.94
23. mt-cyb ENSDARG00000063924 562.90 4219.13 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
24. myhz1.3 ENSDARG00000067997 538.26 4034.44 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
25. myl10 ENSDARG00000062592 536.37 4020.28 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
26. rpl21 ENSDARG00000010516, ENSDARG00000110263 515.52 3864.00 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
27. btf3 ENSDARG00000035400, ENSDARG00000116462 492.78 3693.55 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
28. rpl26 ENSDARG00000102317 490.88 3679.31 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
29. rpl8 ENSDARG00000014867 471.93 3537.28 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
30. acta1b ENSDARG00000055618 460.56 3452.05 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
31. ttnb ttnb 443.50 3324.18
32. rpl36a ENSDARG00000058105, ENSDARG00000112656 437.81 3281.54 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
33. tnni2b.1 ENSDARG00000035958 434.02 3253.13 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
34. rps27a ENSDARG00000032725, ENSDARG00000114059 415.07 3111.09 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
35. aldoab ENSDARG00000034470 409.38 3068.44 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
36. acta1a ENSDARG00000036371 401.80 3011.63 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
37. rpl18a ENSDARG00000025073 399.91 2997.46 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
38. rpl9 ENSDARG00000037350, ENSDARG00000112384 384.75 2883.83 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
39. ttna ttna 382.85 2869.59
40. rps23 ENSDARG00000021838 377.16 2826.94 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
41. myl1 ENSDARG00000014196 365.79 2741.72 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
42. hsp90aa1.1 ENSDARG00000010478 362.00 2713.31 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
43. tmsb4x ENSDARG00000077777 360.11 2699.15 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
44. rpl19 ENSDARG00000013307 354.42 2656.50 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
45. rpl27 ENSDARG00000015128 354.42 2656.50 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
46. rplp1 ENSDARG00000021864 350.63 2628.09 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
47. myhz2 ENSDARG00000012944 341.15 2557.04 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
48. rps26l ENSDARG00000030408 341.15 2557.04 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
49. tnnt3a ENSDARG00000030270 341.15 2557.04 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
50. rpl36 ENSDARG00000100588 335.47 2514.46 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
51. rps9 ENSDARG00000011405, ENSDARG00000113248 335.47 2514.46 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
52. pvalb2 ENSDARG00000002768, ENSDARG00000114085 331.68 2486.05 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
53. hspa8 ENSDARG00000068992, ENSDARG00000114726 325.99 2443.41 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
54. rpl11 ENSDARG00000043509 322.20 2415.00 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
55. actb2 ENSDARG00000037870 320.31 2400.83 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
56. rps14 ENSDARG00000036629 316.51 2372.35 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
57. rps12 ENSDARG00000036875, ENSDARG00000115157 303.25 2272.96 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
58. tpm3 ENSDARG00000005162 299.46 2244.55 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
59. fabp3 ENSDARG00000023290 295.67 2216.15 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
60. si:dkey-150i13.2 ENSDARG00000071052 288.09 2159.33 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
61. rpl18 ENSDARG00000029533 286.19 2145.09 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
62. rpl7 ENSDARG00000007320 267.24 2003.05 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
63. tnni2a.4 ENSDARG00000029069 267.24 2003.05 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
64. actb1 ENSDARG00000037746, ENSDARG00000113649 263.45 1974.65 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
65. mt-co1 ENSDARG00000063905 261.55 1960.41 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
66. rps15 ENSDARG00000070849, ENSDARG00000110979 261.55 1960.41 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
67. eef2b ENSDARG00000100371, ENSDARG00000109247 257.76 1932.00 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
68. tnnt2c ENSDARG00000032242 253.97 1903.59 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
69. rps6 ENSDARG00000019778 250.18 1875.18 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
70. faua ENSDARG00000099022 248.28 1860.94 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
71. rpl14 ENSDARG00000103433 242.60 1818.37 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
72. rpl15 ENSDARG00000009285 240.70 1804.13 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
73. rps19 ENSDARG00000030602 240.70 1804.13 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
74. rps2 ENSDARG00000077291 238.81 1789.96 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
75. rps15a ENSDARG00000010160 233.12 1747.31 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
76. rps24 ENSDARG00000039347 233.12 1747.31 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
77. AC024175.17 AC024175.17 231.23 1733.15
78. rpl5b ENSDARG00000015862, ENSDARG00000109661 229.33 1718.91 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
79. hmga1a ENSDARG00000028335 227.44 1704.74 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
80. RPL29 ENSDARG00000077717 225.54 1690.50 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
81. rps4x ENSDARG00000014690 225.54 1690.50 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
82. eif5a ENSDARG00000017235 221.75 1662.09 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
83. rpl17 ENSDARG00000057556 221.75 1662.09 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
84. rpl6 ENSDARG00000058451 221.75 1662.09 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
85. rps20 ENSDARG00000036044 219.85 1647.85 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
86. smyhc1 ENSDARG00000099959, ENSDARG00000115916 219.85 1647.85 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
87. rpl24 ENSDARG00000099104 217.96 1633.68 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
88. zgc:112425 zgc:112425 217.96 1633.68
89. tmem38a ENSDARG00000024047 216.06 1619.44 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
90. rpl35 ENSDARG00000018334 212.27 1591.04 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
91. rplp2 ENSDARG00000101406 212.27 1591.04 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
92. rps10 ENSDARG00000034897 208.48 1562.63 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
93. rps29 ENSDARG00000041232 208.48 1562.63 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
94. rps5 ENSDARG00000043453 208.48 1562.63 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
95. rps7 ENSDARG00000042566 208.48 1562.63 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
96. RPL37A RPL37A 200.90 1505.81
97. rplp2l ENSDARG00000011201 199.01 1491.65 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
98. rps27.1 ENSDARG00000023298 199.01 1491.65 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
99. rplp0 ENSDARG00000051783 197.11 1477.41 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
100. rpl39 ENSDARG00000036316, ENSDARG00000117167 195.22 1463.24 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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