Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s10.

Sample reads: 133,392. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 26404.54 197946.49
2. tpma ENSDARG00000033683 2527.94 18951.17 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. mt-co2 ENSDARG00000063908 2226.68 16692.72 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
4. ckmb ENSDARG00000040565 1693.40 12694.88 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1682.17 12610.70 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. actc1b ENSDARG00000099197 1558.05 11680.21 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
7. mt-atp6 ENSDARG00000063911 1425.20 10684.27 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. krt4 ENSDARG00000017624, ENSDARG00000115790 1394.01 10450.45 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
9. ckma ENSDARG00000035327, ENSDARG00000114671 1296.71 9721.03 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
10. atp2a1 ENSDARG00000020574 1143.28 8570.81 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
11. mt-co3 ENSDARG00000063912 1134.55 8505.36 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd4 ENSDARG00000063917 1132.67 8491.27 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. mylz3 ENSDARG00000017441 1125.19 8435.19 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. mt-nd1 ENSDARG00000063895 1078.41 8084.50 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
15. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1031.63 7733.80 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
16. si:dkey-151g10.6 si:dkey-151g10.6 919.36 6892.15
17. tnnc2 ENSDARG00000070835, ENSDARG00000111155 878.20 6583.59 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
18. eef1a1l1 ENSDARG00000020850 815.20 6111.30 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. myhz1.3 ENSDARG00000067997 748.46 5610.97 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
20. mt-cyb ENSDARG00000063924 654.28 4904.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
21. rpl10a ENSDARG00000042905, ENSDARG00000115649 631.20 4731.91 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
22. acta1b ENSDARG00000055618 624.97 4685.20 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
23. zgc:66286 zgc:66286 621.85 4661.81
24. myl10 ENSDARG00000062592 595.65 4465.40 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
25. pvalb2 ENSDARG00000002768, ENSDARG00000114085 545.13 4086.67 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
26. rpl23 ENSDARG00000053457 538.27 4035.24 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
27. aldoab ENSDARG00000034470 494.61 3707.93 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
28. myl1 ENSDARG00000014196 493.99 3703.29 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
29. acta1a ENSDARG00000036371 492.11 3689.19 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
30. ppiaa ENSDARG00000009212 488.37 3661.16 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
31. rpl21 ENSDARG00000010516, ENSDARG00000110263 479.02 3591.06 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
32. eef2b ENSDARG00000100371, ENSDARG00000109247 457.19 3427.41 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
33. tnni2b.1 ENSDARG00000035958 457.19 3427.41 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
34. rpl8 ENSDARG00000014867 442.22 3315.18 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
35. actb2 ENSDARG00000037870 435.36 3263.76 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
36. myhz2 ENSDARG00000012944 434.11 3254.39 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
37. btf3 ENSDARG00000035400, ENSDARG00000116462 422.26 3165.55 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
38. rpl36a ENSDARG00000058105, ENSDARG00000112656 420.39 3151.53 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
39. tmsb4x ENSDARG00000077777 404.79 3034.58 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
40. rpl26 ENSDARG00000102317 401.05 3006.55 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
41. hspa8 ENSDARG00000068992, ENSDARG00000114726 399.18 2992.53 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
42. rpl18a ENSDARG00000025073 393.57 2950.47 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
43. rps26l ENSDARG00000030408 386.71 2899.04 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
44. rps27a ENSDARG00000032725, ENSDARG00000114059 383.59 2875.65 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
45. tnni2a.4 ENSDARG00000029069 382.34 2866.28 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
46. ttna ttna 381.09 2856.91
47. col2a1a ENSDARG00000069093, ENSDARG00000111202 367.37 2754.06 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
48. mt-co1 ENSDARG00000063905 366.75 2749.41 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
49. rps14 ENSDARG00000036629 366.12 2744.69 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
50. tnnt3a ENSDARG00000030270 363.00 2721.30 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
51. rps23 ENSDARG00000021838 346.79 2599.78 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
52. ttnb ttnb 342.42 2567.01
53. rps20 ENSDARG00000036044 332.44 2492.20 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
54. rpl9 ENSDARG00000037350, ENSDARG00000112384 329.32 2468.81 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
55. rpl19 ENSDARG00000013307 326.83 2450.14 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
56. tpm3 ENSDARG00000005162 319.97 2398.71 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
57. rpl36 ENSDARG00000100588 314.98 2361.31 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
58. rpl27 ENSDARG00000015128 298.14 2235.06 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
59. eif5a ENSDARG00000017235 296.27 2221.04 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
60. rps5 ENSDARG00000043453 292.52 2192.93 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
61. rpl11 ENSDARG00000043509 288.78 2164.89 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. rplp1 ENSDARG00000021864 288.16 2160.24 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
63. rpl7 ENSDARG00000007320 285.04 2136.85 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
64. hsp90aa1.1 ENSDARG00000010478 284.42 2132.21 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
65. rps2 ENSDARG00000077291 281.92 2113.47 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
66. AC024175.17 AC024175.17 276.93 2076.06
67. si:dkey-150i13.2 ENSDARG00000071052 270.07 2024.63 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
68. actb1 ENSDARG00000037746, ENSDARG00000113649 268.82 2015.26 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
69. tmem38a ENSDARG00000024047 266.33 1996.59 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
70. rps15 ENSDARG00000070849, ENSDARG00000110979 263.83 1977.85 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
71. ATP5B 263.21 1973.20 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
72. rplp0 ENSDARG00000051783 258.22 1935.79 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
73. smyhc1 ENSDARG00000099959, ENSDARG00000115916 255.73 1917.13 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
74. fabp3 ENSDARG00000023290 248.86 1865.62 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
75. tnnt2c ENSDARG00000032242 248.24 1860.98 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
76. rps9 ENSDARG00000011405, ENSDARG00000113248 244.50 1832.94 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
77. hmga1a ENSDARG00000028335 243.87 1828.22 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
78. rpl15 ENSDARG00000009285 240.76 1804.90 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
79. desma ENSDARG00000058656 235.77 1767.49 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
80. col9a1 col9a1 234.52 1758.12
81. rps6 ENSDARG00000019778 234.52 1758.12 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
82. rpl6 ENSDARG00000058451 233.89 1753.40 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
83. rpl18 ENSDARG00000029533 230.15 1725.36 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
84. rps27.1 ENSDARG00000023298 225.16 1687.95 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
85. rpl5b ENSDARG00000015862, ENSDARG00000109661 222.04 1664.56 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
86. rpsa ENSDARG00000019181 222.04 1664.56 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
87. zgc:112425 zgc:112425 222.04 1664.56
88. rps15a ENSDARG00000010160 218.93 1641.25 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
89. tnnt3b ENSDARG00000068457 215.18 1613.14 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
90. rps12 ENSDARG00000036875, ENSDARG00000115157 214.56 1608.49 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
91. rps4x ENSDARG00000014690 212.69 1594.47 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
92. h1f0 ENSDARG00000038559 210.19 1575.73 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
93. rps19 ENSDARG00000030602 209.57 1571.08 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
94. rbfox1l ENSDARG00000021184, ENSDARG00000111700 207.70 1557.06 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
95. atp5g3b 205.83 1543.04 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
96. pvalb1 ENSDARG00000037789 203.96 1529.02 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
97. rps29 ENSDARG00000041232 203.96 1529.02 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
98. faua ENSDARG00000099022 203.33 1524.30 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
99. rpl14 ENSDARG00000103433 201.46 1510.28 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
100. col11a1a ENSDARG00000026165, ENSDARG00000115341 198.97 1491.62 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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