Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_3, section s69.

Sample reads: 96,249. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4009.61 41658.93 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3343.38 34736.95 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd4 ENSMUSG00000064363 2190.77 22761.60 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Atp6 ENSMUSG00000064357 2104.94 21869.85 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd1 ENSMUSG00000064341 2088.59 21699.97 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Co2 ENSMUSG00000064354 1769.79 18387.71 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. Actb ENSMUSG00000029580 1173.05 12187.72 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
8. mt-Co1 ENSMUSG00000064351 1095.39 11380.85 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. H19 ENSMUSG00000000031 1058.60 10998.61 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. Mdk ENSMUSG00000027239 944.16 9809.61 midkine [Source:MGI Symbol;Acc:MGI:96949]
11. Eef1a1 ENSMUSG00000037742 715.27 7431.49 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. mt-Nd3 ENSMUSG00000064360 670.31 6964.37 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. mt-Nd2 ENSMUSG00000064345 641.70 6667.12 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. mt-Co3 ENSMUSG00000064358 617.18 6412.36 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. mt-Rnr2 ENSMUSG00000064339 555.87 5775.36 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
16. Igf2 ENSMUSG00000048583 355.59 3694.50 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Gm13340 ENSMUSG00000083563 351.50 3652.00 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Cfl1 ENSMUSG00000056201 343.33 3567.12 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
19. Rpsa ENSMUSG00000032518 335.16 3482.24 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. mt-Nd5 ENSMUSG00000064367 335.16 3482.24 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Tuba1b ENSMUSG00000023004 310.63 3227.37 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. Nedd4 ENSMUSG00000032216 302.46 3142.49 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. Tubb5 ENSMUSG00000001525 302.46 3142.49 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
24. Rpl4 ENSMUSG00000032399 249.32 2590.38 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
25. Pkm ENSMUSG00000032294 241.15 2505.49 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
26. Hmga2 ENSMUSG00000056758 237.06 2463.00 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
27. Hbb-y ENSMUSG00000052187 228.89 2378.11 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
28. Rrm2 ENSMUSG00000020649 228.89 2378.11 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
29. Tpt1 ENSMUSG00000060126 228.89 2378.11 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
30. Banf1 ENSMUSG00000024844 224.80 2335.62 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
31. Hsp90ab1 ENSMUSG00000023944 216.63 2250.74 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Npm1 ENSMUSG00000057113 216.63 2250.74 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
33. Myl6 ENSMUSG00000090841 212.54 2208.24 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
34. Ubb ENSMUSG00000019505 208.45 2165.75 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
35. Col1a1 ENSMUSG00000001506 196.19 2038.37 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
36. Col3a1 ENSMUSG00000026043 196.19 2038.37 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
37. Hba-x ENSMUSG00000055609 192.10 1995.88 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
38. Gm10800 ENSMUSG00000075014 188.01 1953.38 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
39. Paics ENSMUSG00000029247 188.01 1953.38 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
40. Eif4g2 ENSMUSG00000005610 183.93 1910.99 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
41. Rps20 ENSMUSG00000028234 183.93 1910.99 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
42. Fkbp1a ENSMUSG00000032966 159.40 1656.13 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
43. Rpl18a ENSMUSG00000045128 159.40 1656.13 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
44. Sfrp1 ENSMUSG00000031548 151.23 1571.25 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
45. Hnrnpc ENSMUSG00000060373 147.14 1528.75 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
46. Hnrnpa2b1 ENSMUSG00000004980 143.05 1486.26 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
47. Ywhab ENSMUSG00000018326 143.05 1486.26 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
48. Ran ENSMUSG00000029430 138.97 1443.87 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
49. Cdk4 ENSMUSG00000006728 134.88 1401.37 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
50. Chchd2 ENSMUSG00000070493 134.88 1401.37 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
51. Kpnb1 ENSMUSG00000001440 134.88 1401.37 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
52. Meg3 ENSMUSG00000021268 134.88 1401.37 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
53. Ywhae ENSMUSG00000020849 130.79 1358.88 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
54. Cdc42 ENSMUSG00000006699 126.71 1316.49 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
55. Tecr ENSMUSG00000031708 126.71 1316.49 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
56. Eif5a ENSMUSG00000078812 122.62 1273.99 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
57. Gm15459 ENSMUSG00000100801 122.62 1273.99 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
58. Pbx1 ENSMUSG00000052534 122.62 1273.99 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
59. Rpl23 ENSMUSG00000071415 122.62 1273.99 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
60. Set ENSMUSG00000054766 122.62 1273.99 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
61. Anp32b ENSMUSG00000028333 118.53 1231.50 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
62. Fkbp4 ENSMUSG00000030357 118.53 1231.50 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
63. Hmgn1 ENSMUSG00000040681 118.53 1231.50 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
64. Cdk1 ENSMUSG00000019942 114.44 1189.01 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
65. Grb10 ENSMUSG00000020176 114.44 1189.01 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
66. Hsp90aa1 ENSMUSG00000021270 114.44 1189.01 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
67. Gm5805 ENSMUSG00000061848 110.36 1146.62 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
68. Eef1b2 ENSMUSG00000025967 106.27 1104.12 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
69. Lbh ENSMUSG00000024063 106.27 1104.12 limb-bud and heart [Source:MGI Symbol;Acc:MGI:1925139]
70. Ngfrap1 106.27 1104.12 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
71. Rps26 ENSMUSG00000025362 106.27 1104.12 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
72. Tmsb10 ENSMUSG00000079523 106.27 1104.12 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
73. Ago2 ENSMUSG00000036698 102.18 1061.63 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
74. Caprin1 ENSMUSG00000027184 102.18 1061.63 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
75. H3f3b ENSMUSG00000016559 102.18 1061.63 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
76. Morf4l1 ENSMUSG00000062270 102.18 1061.63 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
77. Rpl32 ENSMUSG00000057841 102.18 1061.63 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
78. Scd2 ENSMUSG00000025203 102.18 1061.63 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
79. Srsf3 ENSMUSG00000071172 102.18 1061.63 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
80. Cd24a ENSMUSG00000047139 98.09 1019.13 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
81. Cox8a ENSMUSG00000035885 98.09 1019.13 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
82. Morf4l2 ENSMUSG00000031422 98.09 1019.13 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
83. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 98.09 1019.13 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
84. Top2a ENSMUSG00000020914 98.09 1019.13 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
85. Atp5g3 ENSMUSG00000018770 94.01 976.74 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
86. Eef2 ENSMUSG00000034994 94.01 976.74 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
87. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 94.01 976.74 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
88. Rps9 ENSMUSG00000006333 94.01 976.74 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
89. Tfg ENSMUSG00000022757 94.01 976.74 Trk-fused gene [Source:MGI Symbol;Acc:MGI:1338041]
90. Ybx1 ENSMUSG00000028639 94.01 976.74 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
91. Hba-a1 ENSMUSG00000069919 89.92 934.25 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
92. Rps15 ENSMUSG00000063457 89.92 934.25 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
93. Rps4x ENSMUSG00000031320 89.92 934.25 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
94. Trim28 ENSMUSG00000005566 89.92 934.25 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
95. Atxn7l3b ENSMUSG00000074748 85.83 891.75 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
96. Ddx5 ENSMUSG00000020719 85.83 891.75 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
97. Hnrnph1 ENSMUSG00000007850 85.83 891.75 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
98. Pabpc1 ENSMUSG00000022283 85.83 891.75 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
99. Rpl39-ps ENSMUSG00000036305 85.83 891.75 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
100. Rpl41 ENSMUSG00000093674 85.83 891.75 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA