Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_3, section s48.

Sample reads: 96,252. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4232.63 43974.34 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 4073.55 42321.60 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd4 ENSMUSG00000064363 2580.78 26812.67 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Atp6 ENSMUSG00000064357 2361.08 24530.13 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Co2 ENSMUSG00000064354 2319.60 24099.17 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 2148.22 22318.64 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co1 ENSMUSG00000064351 1407.99 14628.12 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. H19 ENSMUSG00000000031 938.51 9750.52 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
9. Mdk ENSMUSG00000027239 879.25 9134.85 midkine [Source:MGI Symbol;Acc:MGI:96949]
10. mt-Rnr2 ENSMUSG00000064339 823.19 8552.42 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
11. mt-Nd3 ENSMUSG00000064360 798.57 8296.64 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. mt-Co3 ENSMUSG00000064358 755.73 7851.56 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. mt-Nd2 ENSMUSG00000064345 744.79 7737.90 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. Actb ENSMUSG00000029580 706.50 7340.09 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Eef1a1 ENSMUSG00000037742 691.00 7179.05 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Igf2 ENSMUSG00000048583 516.43 5365.38 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Hbb-y ENSMUSG00000052187 472.67 4910.74 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
18. mt-Nd5 ENSMUSG00000064367 420.25 4366.13 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
19. Gm13340 ENSMUSG00000083563 392.45 4077.31 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Rpsa ENSMUSG00000032518 330.92 3438.05 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. Gm10800 ENSMUSG00000075014 298.10 3097.07 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
22. Hba-x ENSMUSG00000055609 296.27 3078.06 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
23. Nedd4 ENSMUSG00000032216 275.31 2860.30 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
24. Cfl1 ENSMUSG00000056201 259.35 2694.48 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Hmga2 ENSMUSG00000056758 257.99 2680.35 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
26. Hba-a1 ENSMUSG00000069919 252.97 2628.20 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
27. Npm1 ENSMUSG00000057113 250.69 2604.51 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
28. Tuba1b ENSMUSG00000023004 230.64 2396.20 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
29. Tubb5 ENSMUSG00000001525 214.69 2230.49 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
30. Ubb ENSMUSG00000019505 213.32 2216.26 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
31. Tpt1 ENSMUSG00000060126 195.09 2026.86 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
32. Eif4g2 ENSMUSG00000005610 190.98 1984.16 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Rpl4 ENSMUSG00000032399 188.70 1960.47 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
34. Hsp90ab1 ENSMUSG00000023944 185.06 1922.66 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Pkm ENSMUSG00000032294 180.04 1870.50 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
36. Pbx1 ENSMUSG00000052534 175.94 1827.91 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
37. Rpl23 ENSMUSG00000071415 167.74 1742.71 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
38. Hba-a2 ENSMUSG00000069917 155.89 1619.60 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
39. Rps20 ENSMUSG00000028234 149.96 1557.99 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
40. Atp5g3 ENSMUSG00000018770 144.95 1505.94 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
41. Chchd2 ENSMUSG00000070493 143.58 1491.71 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
42. Rps26 ENSMUSG00000025362 142.21 1477.47 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
43. mt-Rnr1 ENSMUSG00000064337 140.84 1463.24 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
44. Eif5a ENSMUSG00000078812 139.93 1453.78 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
45. Fkbp1a ENSMUSG00000032966 139.48 1449.11 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
46. Banf1 ENSMUSG00000024844 133.10 1382.82 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
47. Eef1b2 ENSMUSG00000025967 127.17 1321.22 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
48. Hbb-bh1 ENSMUSG00000052217 124.89 1297.53 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
49. Ywhab ENSMUSG00000018326 124.89 1297.53 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
50. Col3a1 ENSMUSG00000026043 121.70 1264.39 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
51. Gm5805 ENSMUSG00000061848 120.33 1250.15 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
52. Paics ENSMUSG00000029247 118.51 1231.24 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
53. Rpl18a ENSMUSG00000045128 114.41 1188.65 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
54. Myl6 ENSMUSG00000090841 113.95 1183.87 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
55. Col1a1 ENSMUSG00000001506 113.50 1179.19 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
56. Grb10 ENSMUSG00000020176 113.50 1179.19 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
57. Hsp90aa1 ENSMUSG00000021270 113.04 1174.41 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
58. Trim28 ENSMUSG00000005566 112.58 1169.63 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
59. Ngfrap1 112.13 1164.96 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
60. Hnrnpc ENSMUSG00000060373 110.76 1150.73 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
61. Rrm2 ENSMUSG00000020649 110.76 1150.73 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
62. Gpc3 ENSMUSG00000055653 110.31 1146.05 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
63. Rps3a1 ENSMUSG00000028081 106.66 1108.13 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
64. Rps5 ENSMUSG00000012848 106.66 1108.13 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
65. Pabpc1 ENSMUSG00000022283 106.20 1103.35 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
66. Hnrnpa2b1 ENSMUSG00000004980 104.84 1089.22 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
67. Peg3 ENSMUSG00000002265 104.38 1084.44 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
68. Ran ENSMUSG00000029430 104.38 1084.44 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
69. Rps4x ENSMUSG00000031320 102.10 1060.75 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
70. Kpnb1 ENSMUSG00000001440 99.82 1037.07 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
71. Marcks ENSMUSG00000069662 98.91 1027.61 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
72. Tmsb4x ENSMUSG00000049775 96.18 999.25 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
73. Rplp1 ENSMUSG00000007892 95.72 994.47 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
74. Ago2 ENSMUSG00000036698 95.26 989.69 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
75. Set ENSMUSG00000054766 94.35 980.24 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
76. Hmgn1 ENSMUSG00000040681 92.98 966.00 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
77. Tecr ENSMUSG00000031708 92.53 961.33 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
78. Rpl32 ENSMUSG00000057841 91.62 951.87 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
79. Rpl37 ENSMUSG00000041841 91.16 947.09 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
80. Meg3 ENSMUSG00000021268 90.71 942.42 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
81. Rpl39-ps ENSMUSG00000036305 90.25 937.64 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
82. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 90.25 937.64 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
83. Ybx1 ENSMUSG00000028639 89.79 932.86 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
84. Lbh ENSMUSG00000024063 87.97 913.95 limb-bud and heart [Source:MGI Symbol;Acc:MGI:1925139]
85. Morf4l2 ENSMUSG00000031422 87.06 904.50 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
86. Anp32b ENSMUSG00000028333 86.60 899.72 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
87. Rpl8 ENSMUSG00000003970 86.15 895.04 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
88. Ndufa12 ENSMUSG00000020022 85.69 890.26 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
89. Cdkn1c ENSMUSG00000037664 84.78 880.81 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
90. U2af2 ENSMUSG00000030435 84.78 880.81 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
91. Wbp5 84.32 876.03 WW domain binding protein 5
92. Marcksl1 ENSMUSG00000047945 83.87 871.36 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
93. Gas1 ENSMUSG00000052957 83.41 866.58 growth arrest specific 1 [Source:MGI Symbol;Acc:MGI:95655]
94. Gm15459 ENSMUSG00000100801 82.96 861.90 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
95. Tsc22d1 ENSMUSG00000022010 82.50 857.12 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
96. Pcbp1 ENSMUSG00000051695 81.59 847.67 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
97. Ywhae ENSMUSG00000020849 81.59 847.67 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
98. H3f3b ENSMUSG00000016559 80.68 838.21 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
99. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 79.77 828.76 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
100. Ddx5 ENSMUSG00000020719 78.85 819.20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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