Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_3, section s17.

Sample reads: 96,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3795.73 39441.06 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3445.43 35801.13 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2347.00 24387.45 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2206.88 22931.48 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 1919.13 19941.49 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 1866.59 19395.55 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Nd3 ENSMUSG00000064360 1221.04 12687.71 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
8. mt-Co1 ENSMUSG00000064351 1040.89 10815.79 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Co3 ENSMUSG00000064358 853.23 8865.83 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. Eef1a1 ENSMUSG00000037742 835.71 8683.78 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. mt-Nd2 ENSMUSG00000064345 720.61 7487.79 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Rnr2 ENSMUSG00000064339 600.51 6239.84 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
13. Actb ENSMUSG00000029580 590.50 6135.83 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. H19 ENSMUSG00000000031 570.49 5927.91 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
15. Hbb-y ENSMUSG00000052187 530.45 5511.85 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
16. Eif4g2 ENSMUSG00000005610 330.28 3431.91 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
17. Rpsa ENSMUSG00000032518 330.28 3431.91 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
18. Nedd4 ENSMUSG00000032216 315.27 3275.94 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
19. Gm13340 ENSMUSG00000083563 312.77 3249.96 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Tubb2b ENSMUSG00000045136 290.25 3015.96 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
21. Tuba1b ENSMUSG00000023004 282.74 2937.92 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. Mdk ENSMUSG00000027239 280.24 2911.95 midkine [Source:MGI Symbol;Acc:MGI:96949]
23. Hba-x ENSMUSG00000055609 270.23 2807.93 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
24. Tmsb4x ENSMUSG00000049775 267.73 2781.96 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
25. Hba-a1 ENSMUSG00000069919 245.21 2547.95 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
26. mt-Nd5 ENSMUSG00000064367 245.21 2547.95 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
27. Cfl1 ENSMUSG00000056201 237.70 2469.92 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
28. Npm1 ENSMUSG00000057113 232.70 2417.96 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
29. Tubb5 ENSMUSG00000001525 225.19 2339.93 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
30. Chchd2 ENSMUSG00000070493 220.19 2287.97 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
31. Pkm ENSMUSG00000032294 202.67 2105.92 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
32. Rpl4 ENSMUSG00000032399 190.16 1975.93 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
33. Hnrnpa2b1 ENSMUSG00000004980 187.66 1949.96 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
34. Paics ENSMUSG00000029247 185.16 1923.98 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
35. Hnrnpc ENSMUSG00000060373 182.66 1898.00 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
36. Hsp90aa1 ENSMUSG00000021270 177.65 1845.94 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
37. Igf2 ENSMUSG00000048583 175.15 1819.97 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
38. Rrm2 ENSMUSG00000020649 172.65 1793.99 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
39. Map1b ENSMUSG00000052727 167.64 1741.93 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
40. Rpl23 ENSMUSG00000071415 167.64 1741.93 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
41. Tpt1 ENSMUSG00000060126 165.14 1715.95 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
42. Tuba1a ENSMUSG00000072235 165.14 1715.95 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
43. Myl6 ENSMUSG00000090841 157.63 1637.92 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
44. Crabp1 ENSMUSG00000032291 152.63 1585.96 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
45. Rps26 ENSMUSG00000025362 152.63 1585.96 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
46. Rpl18a ENSMUSG00000045128 150.13 1559.99 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
47. Ubb ENSMUSG00000019505 150.13 1559.99 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
48. Gm14303 ENSMUSG00000081344 147.63 1534.01 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
49. Ddx5 ENSMUSG00000020719 142.62 1481.95 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
50. Atp5g3 ENSMUSG00000018770 140.12 1455.97 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
51. Rplp1 ENSMUSG00000007892 140.12 1455.97 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
52. Rps4x ENSMUSG00000031320 140.12 1455.97 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
53. mt-Rnr1 ENSMUSG00000064337 140.12 1455.97 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
54. Banf1 ENSMUSG00000024844 137.62 1430.00 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
55. Ndufa12 ENSMUSG00000020022 135.12 1404.02 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
56. Ywhab ENSMUSG00000018326 135.12 1404.02 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
57. Marcks ENSMUSG00000069662 132.61 1377.94 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
58. Sfpq ENSMUSG00000028820 132.61 1377.94 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
59. Hmga2 ENSMUSG00000056758 130.11 1351.96 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
60. Cd24a ENSMUSG00000047139 127.61 1325.98 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
61. Grb10 ENSMUSG00000020176 127.61 1325.98 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
62. Set ENSMUSG00000054766 127.61 1325.98 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
63. Ywhaz ENSMUSG00000022285 127.61 1325.98 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
64. Srsf3 ENSMUSG00000071172 125.11 1300.01 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
65. Morf4l1 ENSMUSG00000062270 122.60 1273.92 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
66. Morf4l2 ENSMUSG00000031422 122.60 1273.92 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
67. Pcbp1 ENSMUSG00000051695 122.60 1273.92 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
68. Hsp90ab1 ENSMUSG00000023944 120.10 1247.95 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
69. Fkbp1a ENSMUSG00000032966 117.60 1221.97 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
70. H3f3b ENSMUSG00000016559 117.60 1221.97 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
71. Hnrnpa0 ENSMUSG00000007836 117.60 1221.97 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
72. Rps20 ENSMUSG00000028234 117.60 1221.97 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
73. Ybx1 ENSMUSG00000028639 117.60 1221.97 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
74. Rpl37 ENSMUSG00000041841 115.10 1195.99 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
75. Hnrnph1 ENSMUSG00000007850 112.60 1170.02 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
76. Rps3a1 ENSMUSG00000028081 112.60 1170.02 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
77. Hba-a2 ENSMUSG00000069917 110.09 1143.93 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
78. Ywhag ENSMUSG00000051391 110.09 1143.93 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
79. Eef1b2 ENSMUSG00000025967 107.59 1117.96 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
80. Sub1 ENSMUSG00000022205 102.59 1066.00 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
81. Tmpo ENSMUSG00000019961 102.59 1066.00 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
82. Hbb-bh1 ENSMUSG00000052217 100.09 1040.03 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
83. Hnrnpa1 ENSMUSG00000046434 100.09 1040.03 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
84. Hnrnpk ENSMUSG00000021546 100.09 1040.03 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
85. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 97.58 1013.94 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
86. U2af2 ENSMUSG00000030435 97.58 1013.94 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
87. Cdkn1c ENSMUSG00000037664 95.08 987.97 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
88. Hmgn1 ENSMUSG00000040681 95.08 987.97 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
89. Trp53i11 ENSMUSG00000068735 95.08 987.97 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
90. Col3a1 ENSMUSG00000026043 92.58 961.99 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
91. Fubp1 ENSMUSG00000028034 92.58 961.99 far upstream element (FUSE) binding protein 1 [Source:MGI Symbol;Acc:MGI:1196294]
92. Gm5805 ENSMUSG00000061848 92.58 961.99 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
93. Ldha ENSMUSG00000063229 92.58 961.99 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
94. Pbrm1 ENSMUSG00000042323 92.58 961.99 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
95. mt-Atp8 ENSMUSG00000064356 92.58 961.99 mitochondrially encoded ATP synthase 8 [Source:MGI Symbol;Acc:MGI:99926]
96. Eif5a ENSMUSG00000078812 90.08 936.01 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
97. Gm5963 ENSMUSG00000052192 90.08 936.01 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
98. Pbx1 ENSMUSG00000052534 90.08 936.01 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
99. Pabpc1 ENSMUSG00000022283 87.57 909.93 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
100. Prdx1 ENSMUSG00000028691 87.57 909.93 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA