Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_2, section s77.

Sample reads: 96,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4177.17 43404.31 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2732.02 28387.99 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Nd1 ENSMUSG00000064341 2587.51 26886.41 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Co2 ENSMUSG00000064354 2532.45 26314.29 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd4 ENSMUSG00000064363 2346.65 24383.67 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. Ptma ENSMUSG00000026238 2298.48 23883.14 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Co1 ENSMUSG00000064351 1458.91 15159.30 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Actb ENSMUSG00000029580 1135.47 11798.49 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. H19 ENSMUSG00000000031 1101.07 11441.04 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. Mdk ENSMUSG00000027239 867.09 9009.79 midkine [Source:MGI Symbol;Acc:MGI:96949]
11. mt-Nd3 ENSMUSG00000064360 846.44 8795.22 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. Hbb-y ENSMUSG00000052187 756.98 7865.66 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. mt-Co3 ENSMUSG00000064358 743.22 7722.68 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. mt-Nd2 ENSMUSG00000064345 688.17 7150.67 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Eef1a1 ENSMUSG00000037742 653.76 6793.12 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Igf2 ENSMUSG00000048583 557.41 5791.96 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. mt-Rnr2 ENSMUSG00000064339 495.48 5148.45 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
18. Gm13340 ENSMUSG00000083563 357.85 3718.36 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Hba-a1 ENSMUSG00000069919 309.67 3217.73 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
20. Gm10800 ENSMUSG00000075014 289.03 3003.26 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
21. Rpsa ENSMUSG00000032518 289.03 3003.26 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Tubb5 ENSMUSG00000001525 289.03 3003.26 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
23. Npm1 ENSMUSG00000057113 275.27 2860.29 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Tpt1 ENSMUSG00000060126 275.27 2860.29 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
25. mt-Nd5 ENSMUSG00000064367 261.50 2717.20 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
26. Hba-x ENSMUSG00000055609 233.98 2431.25 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
27. Pkm ENSMUSG00000032294 233.98 2431.25 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
28. Tuba1b ENSMUSG00000023004 233.98 2431.25 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
29. Eif4g2 ENSMUSG00000005610 227.09 2359.66 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
30. Hmga2 ENSMUSG00000056758 227.09 2359.66 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
31. Rpl18a ENSMUSG00000045128 227.09 2359.66 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
32. Ubb ENSMUSG00000019505 227.09 2359.66 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
33. Myl6 ENSMUSG00000090841 206.45 2145.19 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
34. Cfl1 ENSMUSG00000056201 199.57 2073.70 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
35. Nedd4 ENSMUSG00000032216 192.69 2002.21 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
36. Paics ENSMUSG00000029247 192.69 2002.21 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
37. Rpl4 ENSMUSG00000032399 192.69 2002.21 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
38. Col3a1 ENSMUSG00000026043 185.80 1930.62 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
39. Eif5a ENSMUSG00000078812 178.92 1859.13 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
40. Hsp90ab1 ENSMUSG00000023944 172.04 1787.64 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
41. Rps20 ENSMUSG00000028234 172.04 1787.64 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
42. Hba-a2 ENSMUSG00000069917 158.28 1644.66 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
43. Rpl23 ENSMUSG00000071415 158.28 1644.66 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
44. Col1a1 ENSMUSG00000001506 151.40 1573.17 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
45. Grb10 ENSMUSG00000020176 144.51 1501.58 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
46. Hnrnpc ENSMUSG00000060373 144.51 1501.58 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
47. Kpnb1 ENSMUSG00000001440 144.51 1501.58 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
48. Rps26 ENSMUSG00000025362 144.51 1501.58 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
49. Rps4x ENSMUSG00000031320 144.51 1501.58 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
50. Ywhab ENSMUSG00000018326 144.51 1501.58 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
51. Col1a2 ENSMUSG00000029661 137.63 1430.09 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
52. Morf4l2 ENSMUSG00000031422 130.75 1358.60 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
53. Chchd2 ENSMUSG00000070493 123.87 1287.11 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
54. Hnrnpa2b1 ENSMUSG00000004980 123.87 1287.11 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
55. Pcbp1 ENSMUSG00000051695 123.87 1287.11 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
56. Sfrp1 ENSMUSG00000031548 123.87 1287.11 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
57. Gm8292 ENSMUSG00000100215 116.99 1215.62 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
58. Gnai2 ENSMUSG00000032562 116.99 1215.62 guanine nucleotide binding protein (G protein), alpha inhibiting 2 [Source:MGI Symbol;Acc:MGI:95772]
59. Igfbp5 ENSMUSG00000026185 116.99 1215.62 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
60. Pabpc1 ENSMUSG00000022283 116.99 1215.62 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
61. Ran ENSMUSG00000029430 116.99 1215.62 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
62. Rpl37 ENSMUSG00000041841 116.99 1215.62 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
63. Banf1 ENSMUSG00000024844 110.11 1144.14 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
64. Eef1b2 ENSMUSG00000025967 110.11 1144.14 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
65. Hmgn1 ENSMUSG00000040681 110.11 1144.14 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
66. Meg3 ENSMUSG00000021268 110.11 1144.14 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
67. Morf4l1 ENSMUSG00000062270 110.11 1144.14 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
68. Son ENSMUSG00000022961 110.11 1144.14 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
69. Srsf3 ENSMUSG00000071172 110.11 1144.14 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
70. Sub1 ENSMUSG00000022205 110.11 1144.14 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
71. Tpm1 ENSMUSG00000032366 110.11 1144.14 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
72. Trim28 ENSMUSG00000005566 110.11 1144.14 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
73. Gm14303 ENSMUSG00000081344 103.22 1072.54 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
74. Rpl39-ps ENSMUSG00000036305 103.22 1072.54 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
75. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 103.22 1072.54 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
76. Tsc22d1 ENSMUSG00000022010 103.22 1072.54 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
77. Ago2 ENSMUSG00000036698 96.34 1001.05 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
78. Aldh1a2 ENSMUSG00000013584 96.34 1001.05 aldehyde dehydrogenase family 1, subfamily A2 [Source:MGI Symbol;Acc:MGI:107928]
79. Cd24a ENSMUSG00000047139 96.34 1001.05 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
80. Gm5805 ENSMUSG00000061848 96.34 1001.05 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
81. Hbb-bh1 ENSMUSG00000052217 96.34 1001.05 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
82. Hsp90aa1 ENSMUSG00000021270 96.34 1001.05 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
83. Igfbp4 ENSMUSG00000017493 96.34 1001.05 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
84. Lamp1 ENSMUSG00000031447 96.34 1001.05 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
85. Ptp4a2 ENSMUSG00000028788 96.34 1001.05 protein tyrosine phosphatase 4a2 [Source:MGI Symbol;Acc:MGI:1277117]
86. Tmpo ENSMUSG00000019961 96.34 1001.05 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
87. Atxn7l3b ENSMUSG00000074748 89.46 929.56 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
88. Ccnd2 ENSMUSG00000000184 89.46 929.56 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
89. Cox8a ENSMUSG00000035885 89.46 929.56 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
90. H3f3b ENSMUSG00000016559 89.46 929.56 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
91. Tmsb4x ENSMUSG00000049775 89.46 929.56 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
92. U2af2 ENSMUSG00000030435 89.46 929.56 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
93. Wbp5 89.46 929.56 WW domain binding protein 5
94. Ywhaz ENSMUSG00000022285 89.46 929.56 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
95. Cdc42 ENSMUSG00000006699 82.58 858.08 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
96. Cdk4 ENSMUSG00000006728 82.58 858.08 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
97. Cycs ENSMUSG00000063694 82.58 858.08 cytochrome c, somatic [Source:MGI Symbol;Acc:MGI:88578]
98. Ddx5 ENSMUSG00000020719 82.58 858.08 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
99. Ndufa12 ENSMUSG00000020022 82.58 858.08 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
100. Rpl26 ENSMUSG00000060938 82.58 858.08 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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