Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_2, section s76.

Sample reads: 96,252. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3858.96 40092.42 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 3064.47 31838.12 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. Ptma ENSMUSG00000026238 2723.97 28300.52 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Nd1 ENSMUSG00000064341 2563.18 26630.00 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 2288.89 23780.28 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 2137.56 22208.05 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. H19 ENSMUSG00000000031 1390.36 14445.06 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
8. mt-Co1 ENSMUSG00000064351 1352.53 14052.03 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. Actb ENSMUSG00000029580 1286.32 13364.14 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. Mdk ENSMUSG00000027239 983.66 10219.67 midkine [Source:MGI Symbol;Acc:MGI:96949]
11. mt-Nd3 ENSMUSG00000064360 955.28 9924.82 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. mt-Co3 ENSMUSG00000064358 898.53 9335.22 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. Hbb-y ENSMUSG00000052187 766.12 7959.56 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
14. mt-Nd2 ENSMUSG00000064345 747.20 7762.99 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Eef1a1 ENSMUSG00000037742 690.45 7173.39 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Igf2 ENSMUSG00000048583 444.54 4618.52 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Cfl1 ENSMUSG00000056201 425.62 4421.95 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
18. Gm13340 ENSMUSG00000083563 416.16 4323.67 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. mt-Rnr2 ENSMUSG00000064339 378.33 3930.64 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
20. Hba-x ENSMUSG00000055609 340.50 3537.60 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
21. Tpt1 ENSMUSG00000060126 331.04 3439.32 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
22. Hba-a1 ENSMUSG00000069919 321.58 3341.04 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
23. Ubb ENSMUSG00000019505 321.58 3341.04 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
24. Npm1 ENSMUSG00000057113 274.29 2849.72 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Tuba1b ENSMUSG00000023004 274.29 2849.72 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Hmga2 ENSMUSG00000056758 264.83 2751.43 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
27. Pkm ENSMUSG00000032294 255.37 2653.15 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
28. Nedd4 ENSMUSG00000032216 227.00 2358.40 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
29. Atp5g3 ENSMUSG00000018770 217.54 2260.12 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
30. mt-Nd5 ENSMUSG00000064367 208.08 2161.83 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
31. Hbb-bh1 ENSMUSG00000052217 198.62 2063.55 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
32. Gm5963 ENSMUSG00000052192 189.16 1965.27 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
33. Hsp90ab1 ENSMUSG00000023944 189.16 1965.27 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
34. Rpsa ENSMUSG00000032518 189.16 1965.27 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
35. Hnrnpc ENSMUSG00000060373 179.71 1867.09 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
36. Rpl4 ENSMUSG00000032399 179.71 1867.09 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
37. Chchd2 ENSMUSG00000070493 170.25 1768.80 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
38. Ddx5 ENSMUSG00000020719 170.25 1768.80 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
39. Grb10 ENSMUSG00000020176 170.25 1768.80 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
40. Ran ENSMUSG00000029430 170.25 1768.80 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
41. Col3a1 ENSMUSG00000026043 160.79 1670.52 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
42. Cdk4 ENSMUSG00000006728 151.33 1572.23 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
43. Hba-a2 ENSMUSG00000069917 151.33 1572.23 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
44. Rpl23 ENSMUSG00000071415 151.33 1572.23 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
45. Rps9 ENSMUSG00000006333 151.33 1572.23 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
46. Tecr ENSMUSG00000031708 151.33 1572.23 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
47. Tubb5 ENSMUSG00000001525 151.33 1572.23 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
48. Col1a1 ENSMUSG00000001506 141.87 1473.95 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
49. Eif4g2 ENSMUSG00000005610 141.87 1473.95 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
50. Eif5a ENSMUSG00000078812 141.87 1473.95 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
51. Myl6 ENSMUSG00000090841 141.87 1473.95 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
52. Ngfrap1 141.87 1473.95 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
53. Plagl1 ENSMUSG00000019817 141.87 1473.95 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
54. Rpl18a ENSMUSG00000045128 141.87 1473.95 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
55. Rpl32 ENSMUSG00000057841 141.87 1473.95 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
56. Sub1 ENSMUSG00000022205 141.87 1473.95 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
57. Ywhab ENSMUSG00000018326 141.87 1473.95 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
58. Fkbp1a ENSMUSG00000032966 132.42 1375.77 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
59. Gm14303 ENSMUSG00000081344 132.42 1375.77 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
60. Gm9844 ENSMUSG00000091955 132.42 1375.77 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
61. Prdx1 ENSMUSG00000028691 132.42 1375.77 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
62. Scd2 ENSMUSG00000025203 132.42 1375.77 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
63. Gm14586 ENSMUSG00000083621 122.96 1277.49 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
64. Hmgn1 ENSMUSG00000040681 122.96 1277.49 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
65. Rps20 ENSMUSG00000028234 122.96 1277.49 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
66. Rps26 ENSMUSG00000025362 122.96 1277.49 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
67. Sfrp1 ENSMUSG00000031548 122.96 1277.49 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
68. Tmsb10 ENSMUSG00000079523 122.96 1277.49 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
69. Banf1 ENSMUSG00000024844 113.50 1179.20 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
70. Eef1b2 ENSMUSG00000025967 113.50 1179.20 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
71. Gm15459 ENSMUSG00000100801 113.50 1179.20 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
72. Kpnb1 ENSMUSG00000001440 113.50 1179.20 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
73. Slc38a2 ENSMUSG00000022462 113.50 1179.20 solute carrier family 38, member 2 [Source:MGI Symbol;Acc:MGI:1915010]
74. Ssbp3 ENSMUSG00000061887 113.50 1179.20 single-stranded DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1919725]
75. Ywhae ENSMUSG00000020849 113.50 1179.20 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
76. Gm10073 ENSMUSG00000060019 104.04 1080.92 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
77. Hsp90aa1 ENSMUSG00000021270 104.04 1080.92 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
78. Ldha ENSMUSG00000063229 104.04 1080.92 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
79. Pabpc1 ENSMUSG00000022283 104.04 1080.92 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
80. Rpl37 ENSMUSG00000041841 104.04 1080.92 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
81. Srsf3 ENSMUSG00000071172 104.04 1080.92 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
82. 2010107E04Rik 94.58 982.63 RIKEN cDNA 2010107E04 gene, transcript variant X1
83. Acta2 ENSMUSG00000035783 94.58 982.63 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
84. Dnaja2 ENSMUSG00000031701 94.58 982.63 DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
85. Gnai2 ENSMUSG00000032562 94.58 982.63 guanine nucleotide binding protein (G protein), alpha inhibiting 2 [Source:MGI Symbol;Acc:MGI:95772]
86. Map1lc3b ENSMUSG00000031812 94.58 982.63 microtubule-associated protein 1 light chain 3 beta [Source:MGI Symbol;Acc:MGI:1914693]
87. Morf4l2 ENSMUSG00000031422 94.58 982.63 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
88. Pdia6 ENSMUSG00000020571 94.58 982.63 protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
89. Rrm2 ENSMUSG00000020649 94.58 982.63 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
90. Sparc ENSMUSG00000018593 94.58 982.63 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
91. Tpm1 ENSMUSG00000032366 94.58 982.63 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
92. Tuba1a ENSMUSG00000072235 94.58 982.63 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
93. Acat2 ENSMUSG00000023832 85.12 884.35 acetyl-Coenzyme A acetyltransferase 2 [Source:MGI Symbol;Acc:MGI:87871]
94. Aldh1a2 ENSMUSG00000013584 85.12 884.35 aldehyde dehydrogenase family 1, subfamily A2 [Source:MGI Symbol;Acc:MGI:107928]
95. Arpc2 ENSMUSG00000006304 85.12 884.35 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
96. Cd24a ENSMUSG00000047139 85.12 884.35 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
97. Col1a2 ENSMUSG00000029661 85.12 884.35 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
98. Dpysl2 ENSMUSG00000022048 85.12 884.35 dihydropyrimidinase-like 2 [Source:MGI Symbol;Acc:MGI:1349763]
99. Gm10800 ENSMUSG00000075014 85.12 884.35 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
100. Hnrnpa2b1 ENSMUSG00000004980 85.12 884.35 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA