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Experiment Mouse_E11_5_slice_2, section s75.

Sample reads: 96,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3521.59 36592.24 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2588.22 26893.75 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2463.06 25593.24 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2158.19 22425.39 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2154.62 22388.29 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 1938.26 20140.13 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1223.03 12708.30 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. H19 ENSMUSG00000000031 953.04 9902.88 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
9. Mdk ENSMUSG00000027239 862.74 8964.58 midkine [Source:MGI Symbol;Acc:MGI:96949]
10. mt-Nd3 ENSMUSG00000064360 845.75 8788.04 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Co3 ENSMUSG00000064358 826.08 8583.66 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Eef1a1 ENSMUSG00000037742 619.56 6437.74 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. Actb ENSMUSG00000029580 616.88 6409.90 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. mt-Nd2 ENSMUSG00000064345 592.74 6159.06 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Igf2 ENSMUSG00000048583 558.77 5806.08 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
16. Hbb-y ENSMUSG00000052187 462.21 4802.75 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
17. Gm13340 ENSMUSG00000083563 345.99 3595.12 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Tuba1b ENSMUSG00000023004 328.11 3409.34 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
19. Tubb5 ENSMUSG00000001525 295.03 3065.61 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
20. Hmga2 ENSMUSG00000056758 289.67 3009.91 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
21. Hba-a1 ENSMUSG00000069919 288.77 3000.56 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
22. mt-Rnr2 ENSMUSG00000064339 283.41 2944.87 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
23. Pkm ENSMUSG00000032294 270.89 2814.77 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
24. Npm1 ENSMUSG00000057113 253.01 2628.98 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Tpt1 ENSMUSG00000060126 241.39 2508.24 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
26. mt-Nd5 ENSMUSG00000064367 240.49 2498.89 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
27. Hba-x ENSMUSG00000055609 234.24 2433.95 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
28. Ubb ENSMUSG00000019505 226.19 2350.30 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
29. Rpsa ENSMUSG00000032518 224.40 2331.70 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
30. Cfl1 ENSMUSG00000056201 215.46 2238.81 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
31. Nedd4 ENSMUSG00000032216 215.46 2238.81 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
32. Chchd2 ENSMUSG00000070493 201.16 2090.22 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
33. Grb10 ENSMUSG00000020176 184.17 1913.68 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
34. Col3a1 ENSMUSG00000026043 177.02 1839.38 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
35. Hsp90ab1 ENSMUSG00000023944 169.87 1765.09 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
36. Rpl23 ENSMUSG00000071415 165.40 1718.64 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
37. Sfrp1 ENSMUSG00000031548 163.61 1700.04 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
38. Rpl4 ENSMUSG00000032399 162.71 1690.69 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
39. Rps26 ENSMUSG00000025362 160.93 1672.20 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
40. Atp5g3 ENSMUSG00000018770 151.09 1569.95 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
41. Eif4g2 ENSMUSG00000005610 151.09 1569.95 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
42. Eif5a ENSMUSG00000078812 150.20 1560.70 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
43. Myl6 ENSMUSG00000090841 150.20 1560.70 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
44. Rps20 ENSMUSG00000028234 141.26 1467.81 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
45. Fkbp1a ENSMUSG00000032966 138.57 1439.86 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
46. Ywhab ENSMUSG00000018326 135.89 1412.01 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
47. Eef1b2 ENSMUSG00000025967 131.42 1365.56 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
48. Hnrnpc ENSMUSG00000060373 131.42 1365.56 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
49. Col1a1 ENSMUSG00000001506 130.53 1356.32 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
50. Paics ENSMUSG00000029247 124.27 1291.27 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
51. Cdk4 ENSMUSG00000006728 122.48 1272.67 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
52. Ybx1 ENSMUSG00000028639 122.48 1272.67 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
53. Hmgn1 ENSMUSG00000040681 119.80 1244.82 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
54. Ran ENSMUSG00000029430 118.91 1235.57 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
55. Gm5805 ENSMUSG00000061848 117.12 1216.97 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
56. Hsp90aa1 ENSMUSG00000021270 116.22 1207.62 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
57. Banf1 ENSMUSG00000024844 113.54 1179.77 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
58. Rps4x ENSMUSG00000031320 113.54 1179.77 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
59. U2af2 ENSMUSG00000030435 113.54 1179.77 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
60. Pcbp1 ENSMUSG00000051695 110.86 1151.93 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
61. Hba-a2 ENSMUSG00000069917 109.07 1133.33 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
62. Hnrnpa2b1 ENSMUSG00000004980 108.18 1124.08 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
63. Hbb-bh1 ENSMUSG00000052217 107.28 1114.73 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
64. Trim28 ENSMUSG00000005566 107.28 1114.73 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
65. Rpl18a ENSMUSG00000045128 106.39 1105.48 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
66. Ndufa12 ENSMUSG00000020022 104.60 1086.88 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
67. Rpl32 ENSMUSG00000057841 104.60 1086.88 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
68. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 104.60 1086.88 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
69. Tsc22d1 ENSMUSG00000022010 102.81 1068.28 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
70. Pabpc1 ENSMUSG00000022283 101.92 1059.03 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
71. Rplp1 ENSMUSG00000007892 101.92 1059.03 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
72. Rps3a1 ENSMUSG00000028081 101.92 1059.03 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
73. Meg3 ENSMUSG00000021268 98.34 1021.83 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
74. Tmsb10 ENSMUSG00000079523 98.34 1021.83 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
75. Lamp1 ENSMUSG00000031447 93.87 975.39 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
76. Gm14303 ENSMUSG00000081344 92.98 966.14 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
77. Serpinh1 ENSMUSG00000070436 92.98 966.14 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
78. Cox8a ENSMUSG00000035885 92.09 956.89 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
79. Rps5 ENSMUSG00000012848 91.19 947.54 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
80. Ddx5 ENSMUSG00000020719 90.30 938.29 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
81. Sub1 ENSMUSG00000022205 88.51 919.69 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
82. Tecr ENSMUSG00000031708 88.51 919.69 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
83. Cdkn1c ENSMUSG00000037664 87.62 910.44 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
84. Rpl37 ENSMUSG00000041841 87.62 910.44 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
85. Srsf3 ENSMUSG00000071172 86.72 901.09 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
86. Stmn1 ENSMUSG00000028832 86.72 901.09 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
87. Fkbp4 ENSMUSG00000030357 85.83 891.84 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
88. Ngfrap1 85.83 891.84 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
89. Tpm1 ENSMUSG00000032366 85.83 891.84 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
90. Ddx39b ENSMUSG00000019432 84.93 882.49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
91. Gm10800 ENSMUSG00000075014 84.93 882.49 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
92. Gm15459 ENSMUSG00000100801 84.93 882.49 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
93. Set ENSMUSG00000054766 84.93 882.49 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
94. Rpl26 ENSMUSG00000060938 84.04 873.25 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
95. Anp32b ENSMUSG00000028333 83.14 863.89 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
96. Rpl8 ENSMUSG00000003970 82.25 854.65 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
97. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 81.36 845.40 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
98. Rpl41 ENSMUSG00000093674 81.36 845.40 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
99. Rps9 ENSMUSG00000006333 81.36 845.40 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
100. Ywhae ENSMUSG00000020849 81.36 845.40 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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