Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_2, section s74.

Sample reads: 96,253. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4096.02 42554.59 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2434.96 25297.42 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Nd4 ENSMUSG00000064363 2029.13 21081.15 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Nd1 ENSMUSG00000064341 1859.25 19316.22 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. Ptma ENSMUSG00000026238 1415.67 14707.76 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
6. Mdk ENSMUSG00000027239 1274.11 13237.05 midkine [Source:MGI Symbol;Acc:MGI:96949]
7. mt-Co2 ENSMUSG00000064354 1274.11 13237.05 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 1264.67 13138.98 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Co3 ENSMUSG00000064358 887.16 9216.93 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. H19 ENSMUSG00000000031 849.40 8824.63 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
11. mt-Nd2 ENSMUSG00000064345 736.15 7648.05 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Eef1a1 ENSMUSG00000037742 604.02 6275.32 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. mt-Nd3 ENSMUSG00000064360 604.02 6275.32 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. Hbb-y ENSMUSG00000052187 490.77 5098.73 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
15. Gm10800 ENSMUSG00000075014 462.45 4804.51 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
16. Rpl4 ENSMUSG00000032399 453.02 4706.54 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
17. mt-Rnr2 ENSMUSG00000064339 453.02 4706.54 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
18. Tpt1 ENSMUSG00000060126 434.14 4510.39 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
19. Pkm ENSMUSG00000032294 386.95 4020.12 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
20. Igf2 ENSMUSG00000048583 377.51 3922.05 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
21. Rpl37 ENSMUSG00000041841 368.08 3824.08 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
22. Hba-x ENSMUSG00000055609 358.64 3726.00 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
23. Rpl18a ENSMUSG00000045128 358.64 3726.00 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
24. Tuba1b ENSMUSG00000023004 339.76 3529.85 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
25. Hmga2 ENSMUSG00000056758 320.89 3333.81 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
26. Gm13340 ENSMUSG00000083563 302.01 3137.66 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
27. Actb ENSMUSG00000029580 283.13 2941.51 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
28. Ubb ENSMUSG00000019505 283.13 2941.51 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
29. Myl6 ENSMUSG00000090841 273.70 2843.54 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
30. Cfl1 ENSMUSG00000056201 254.82 2647.39 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
31. Npm1 ENSMUSG00000057113 254.82 2647.39 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
32. Rps20 ENSMUSG00000028234 245.38 2549.32 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
33. mt-Nd5 ENSMUSG00000064367 245.38 2549.32 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
34. Hsp90ab1 ENSMUSG00000023944 235.95 2451.34 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Rpl32 ENSMUSG00000057841 226.51 2353.27 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
36. Banf1 ENSMUSG00000024844 198.19 2059.05 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
37. Paics ENSMUSG00000029247 198.19 2059.05 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
38. Sub1 ENSMUSG00000022205 188.76 1961.08 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
39. Tubb5 ENSMUSG00000001525 188.76 1961.08 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
40. Nedd4 ENSMUSG00000032216 179.32 1863.00 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
41. Rpl23 ENSMUSG00000071415 179.32 1863.00 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
42. Eef2 ENSMUSG00000034994 169.88 1764.93 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
43. Fkbp1a ENSMUSG00000032966 169.88 1764.93 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
44. Sfrp1 ENSMUSG00000031548 169.88 1764.93 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
45. Gm5963 ENSMUSG00000052192 160.44 1666.85 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
46. Rpl41 ENSMUSG00000093674 160.44 1666.85 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
47. Rps26 ENSMUSG00000025362 160.44 1666.85 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
48. Chchd2 ENSMUSG00000070493 151.01 1568.88 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
49. Plagl1 ENSMUSG00000019817 151.01 1568.88 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
50. Tpm4 ENSMUSG00000031799 151.01 1568.88 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
51. Ywhab ENSMUSG00000018326 151.01 1568.88 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
52. Eef1b2 ENSMUSG00000025967 141.57 1470.81 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
53. Grb10 ENSMUSG00000020176 141.57 1470.81 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
54. Hbb-bh1 ENSMUSG00000052217 141.57 1470.81 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
55. Ndufa12 ENSMUSG00000020022 141.57 1470.81 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
56. Trim28 ENSMUSG00000005566 141.57 1470.81 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
57. Eif4g2 ENSMUSG00000005610 132.13 1372.73 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
58. Gm8292 ENSMUSG00000100215 132.13 1372.73 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
59. Rps4x ENSMUSG00000031320 132.13 1372.73 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
60. Sparc ENSMUSG00000018593 132.13 1372.73 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
61. Col3a1 ENSMUSG00000026043 122.69 1274.66 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
62. Hmgn1 ENSMUSG00000040681 122.69 1274.66 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
63. Hnrnpc ENSMUSG00000060373 122.69 1274.66 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
64. Peg3 ENSMUSG00000002265 122.69 1274.66 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
65. Atp5g3 ENSMUSG00000018770 113.25 1176.58 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
66. Cdk4 ENSMUSG00000006728 113.25 1176.58 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
67. Gm14586 ENSMUSG00000083621 113.25 1176.58 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
68. Peg10 ENSMUSG00000092035 113.25 1176.58 paternally expressed 10 [Source:MGI Symbol;Acc:MGI:2157785]
69. Rrm2 ENSMUSG00000020649 113.25 1176.58 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
70. Tmsb10 ENSMUSG00000079523 113.25 1176.58 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
71. Atp5a1 ENSMUSG00000025428, ENSMUSG00000116276 103.82 1078.61 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 [Source:MGI Symbol;Acc:MGI:88115]
72. Ctnna1 ENSMUSG00000037815 103.82 1078.61 catenin (cadherin associated protein), alpha 1 [Source:MGI Symbol;Acc:MGI:88274]
73. Eif4h ENSMUSG00000040731 103.82 1078.61 eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
74. Hba-a1 ENSMUSG00000069919 103.82 1078.61 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
75. Hsp90aa1 ENSMUSG00000021270 103.82 1078.61 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
76. Pcbp1 ENSMUSG00000051695 103.82 1078.61 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
77. Ran ENSMUSG00000029430 103.82 1078.61 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
78. Rpl13a ENSMUSG00000074129 103.82 1078.61 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
79. Rpl39-ps ENSMUSG00000036305 103.82 1078.61 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
80. Tecr ENSMUSG00000031708 103.82 1078.61 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
81. U2af2 ENSMUSG00000030435 103.82 1078.61 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
82. Zfp36l1 ENSMUSG00000021127 103.82 1078.61 zinc finger protein 36, C3H type-like 1 [Source:MGI Symbol;Acc:MGI:107946]
83. Zfp386 ENSMUSG00000042063 103.82 1078.61 zinc finger protein 386 (Kruppel-like) [Source:MGI Symbol;Acc:MGI:1930708]
84. Atp5b ENSMUSG00000025393 94.38 980.54 ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Source:MGI Symbol;Acc:MGI:107801]
85. Ddx5 ENSMUSG00000020719 94.38 980.54 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
86. H3f3b ENSMUSG00000016559 94.38 980.54 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
87. Kpnb1 ENSMUSG00000001440 94.38 980.54 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
88. Morf4l2 ENSMUSG00000031422 94.38 980.54 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
89. Ngfrap1 94.38 980.54 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
90. Rpl13 ENSMUSG00000000740 94.38 980.54 ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:105922]
91. Rpl8 ENSMUSG00000003970 94.38 980.54 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
92. Rplp1 ENSMUSG00000007892 94.38 980.54 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
93. Sepw1 94.38 980.54 selenoprotein W, muscle 1
94. Serbp1 ENSMUSG00000036371 94.38 980.54 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
95. Abl1 ENSMUSG00000026842 84.94 882.46 c-abl oncogene 1, non-receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:87859]
96. Arpc2 ENSMUSG00000006304 84.94 882.46 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
97. Capns1 ENSMUSG00000001794 84.94 882.46 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
98. Cdk1 ENSMUSG00000019942 84.94 882.46 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
99. Col5a2 ENSMUSG00000026042 84.94 882.46 collagen, type V, alpha 2 [Source:MGI Symbol;Acc:MGI:88458]
100. Cox6a1 ENSMUSG00000041697 84.94 882.46 cytochrome c oxidase subunit 6A1 [Source:MGI Symbol;Acc:MGI:103099]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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