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Experiment Mouse_E11_5_slice_2, section s70.

Sample reads: 96,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Nd1 ENSMUSG00000064341 4094.05 42539.52 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
2. mt-Cytb ENSMUSG00000064370 4064.59 42233.41 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd4 ENSMUSG00000064363 2621.37 27237.53 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Atp6 ENSMUSG00000064357 2503.55 26013.31 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Co2 ENSMUSG00000064354 2297.38 23871.09 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. Ptma ENSMUSG00000026238 2164.84 22493.92 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Co1 ENSMUSG00000064351 1428.50 14842.93 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Rnr2 ENSMUSG00000064339 1347.50 14001.29 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Nd3 ENSMUSG00000064360 964.60 10022.74 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. Actb ENSMUSG00000029580 927.79 9640.27 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd2 ENSMUSG00000064345 839.43 8722.16 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Gm10800 ENSMUSG00000075014 765.79 7957.00 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
13. H19 ENSMUSG00000000031 699.52 7268.41 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Eef1a1 ENSMUSG00000037742 596.43 6197.25 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Hmga2 ENSMUSG00000056758 596.43 6197.25 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
16. Mdk ENSMUSG00000027239 559.62 5814.77 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. mt-Co3 ENSMUSG00000064358 522.80 5432.19 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Gm13340 ENSMUSG00000083563 508.07 5279.14 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Hbb-y ENSMUSG00000052187 427.08 4437.61 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
20. mt-Nd5 ENSMUSG00000064367 390.26 4055.02 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Tuba1b ENSMUSG00000023004 272.45 2830.91 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. Tubb5 ENSMUSG00000001525 250.36 2601.38 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
23. Npm1 ENSMUSG00000057113 242.99 2524.80 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Rpl18a ENSMUSG00000045128 242.99 2524.80 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
25. Igf2 ENSMUSG00000048583 235.63 2448.33 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
26. Rpsa ENSMUSG00000032518 228.27 2371.86 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Cfl1 ENSMUSG00000056201 220.90 2295.28 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
28. Chchd2 ENSMUSG00000070493 213.54 2218.80 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
29. Hsp90ab1 ENSMUSG00000023944 213.54 2218.80 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
30. Banf1 ENSMUSG00000024844 198.81 2065.75 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
31. Pkm ENSMUSG00000032294 198.81 2065.75 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
32. Set ENSMUSG00000054766 198.81 2065.75 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
33. Hba-x ENSMUSG00000055609 191.45 1989.27 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
34. Tpt1 ENSMUSG00000060126 191.45 1989.27 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
35. Hba-a1 ENSMUSG00000069919 184.08 1912.70 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
36. Nedd4 ENSMUSG00000032216 184.08 1912.70 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
37. Eif4g2 ENSMUSG00000005610 176.72 1836.22 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
38. Ubb ENSMUSG00000019505 176.72 1836.22 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
39. Ybx1 ENSMUSG00000028639 169.36 1759.75 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
40. Rpl4 ENSMUSG00000032399 161.99 1683.17 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
41. Rps26 ENSMUSG00000025362 161.99 1683.17 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
42. Sfrp1 ENSMUSG00000031548 161.99 1683.17 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
43. Gm17132 ENSMUSG00000061331 154.63 1606.69 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
44. Grb10 ENSMUSG00000020176 154.63 1606.69 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
45. Hmgn1 ENSMUSG00000040681 154.63 1606.69 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
46. Rrm2 ENSMUSG00000020649 154.63 1606.69 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
47. Marcks ENSMUSG00000069662 147.27 1530.22 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
48. Rps20 ENSMUSG00000028234 147.27 1530.22 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
49. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 147.27 1530.22 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
50. Col3a1 ENSMUSG00000026043 139.90 1453.64 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
51. Eef1b2 ENSMUSG00000025967 139.90 1453.64 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
52. Pbx1 ENSMUSG00000052534 139.90 1453.64 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
53. Peg3 ENSMUSG00000002265 139.90 1453.64 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
54. Ywhab ENSMUSG00000018326 139.90 1453.64 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
55. Eif5a ENSMUSG00000078812 132.54 1377.17 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
56. Hnrnpc ENSMUSG00000060373 132.54 1377.17 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
57. Myl6 ENSMUSG00000090841 132.54 1377.17 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
58. Anp32b ENSMUSG00000028333 125.18 1300.69 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
59. Fkbp1a ENSMUSG00000032966 125.18 1300.69 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
60. Pbrm1 ENSMUSG00000042323 125.18 1300.69 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
61. Ran ENSMUSG00000029430 125.18 1300.69 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
62. Sub1 ENSMUSG00000022205 125.18 1300.69 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
63. Top2a ENSMUSG00000020914 125.18 1300.69 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
64. Cox8a ENSMUSG00000035885 117.81 1224.11 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
65. Paics ENSMUSG00000029247 117.81 1224.11 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
66. Pcbp1 ENSMUSG00000051695 117.81 1224.11 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
67. Rps4x ENSMUSG00000031320 117.81 1224.11 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
68. Gm5805 ENSMUSG00000061848 110.45 1147.64 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
69. Rpl23 ENSMUSG00000071415 110.45 1147.64 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
70. Rplp1 ENSMUSG00000007892 110.45 1147.64 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
71. Tsc22d1 ENSMUSG00000022010 110.45 1147.64 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
72. Hba-a2 ENSMUSG00000069917 103.09 1071.16 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
73. Igfbp5 ENSMUSG00000026185 103.09 1071.16 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
74. Plagl1 ENSMUSG00000019817 103.09 1071.16 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
75. Serbp1 ENSMUSG00000036371 103.09 1071.16 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
76. Trim28 ENSMUSG00000005566 103.09 1071.16 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
77. Cd24a ENSMUSG00000047139 95.72 994.59 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
78. Gm8292 ENSMUSG00000100215 95.72 994.59 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
79. H3f3b ENSMUSG00000016559 95.72 994.59 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
80. Kpnb1 ENSMUSG00000001440 95.72 994.59 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
81. Morf4l1 ENSMUSG00000062270 95.72 994.59 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
82. Prdx1 ENSMUSG00000028691 95.72 994.59 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
83. Rpl32 ENSMUSG00000057841 95.72 994.59 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
84. Tmpo ENSMUSG00000019961 95.72 994.59 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
85. U2af2 ENSMUSG00000030435 95.72 994.59 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
86. 2810417H13Rik 88.36 918.11 RIKEN cDNA 2810417H13 gene
87. Arl6ip1 ENSMUSG00000030654 88.36 918.11 ADP-ribosylation factor-like 6 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1858943]
88. Ccnd2 ENSMUSG00000000184 88.36 918.11 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
89. Col1a1 ENSMUSG00000001506 88.36 918.11 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
90. Hbb-bh1 ENSMUSG00000052217 88.36 918.11 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
91. Hsp90aa1 ENSMUSG00000021270 88.36 918.11 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
92. Lamp1 ENSMUSG00000031447 88.36 918.11 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
93. Meg3 ENSMUSG00000021268 88.36 918.11 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
94. Pabpc1 ENSMUSG00000022283 88.36 918.11 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
95. Prkar1a ENSMUSG00000020612 88.36 918.11 protein kinase, cAMP dependent regulatory, type I, alpha [Source:MGI Symbol;Acc:MGI:104878]
96. Tecr ENSMUSG00000031708 88.36 918.11 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
97. Top1 ENSMUSG00000070544 88.36 918.11 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
98. Wbp5 88.36 918.11 WW domain binding protein 5
99. Ywhaq ENSMUSG00000076432 88.36 918.11 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
100. Ago2 ENSMUSG00000036698 81.00 841.64 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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