Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_2, section s69.

Sample reads: 96,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3412.31 35455.10 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2585.24 26861.55 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2122.29 22051.34 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2080.68 21619.00 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 2070.27 21510.83 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 2023.46 21024.46 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. Actb ENSMUSG00000029580 1165.18 12106.63 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
8. mt-Co1 ENSMUSG00000064351 1045.54 10863.53 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. Mdk ENSMUSG00000027239 863.48 8971.86 midkine [Source:MGI Symbol;Acc:MGI:96949]
10. H19 ENSMUSG00000000031 821.87 8539.52 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
11. mt-Nd2 ENSMUSG00000064345 712.63 7404.48 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Rnr2 ENSMUSG00000064339 691.83 7188.36 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
13. mt-Nd3 ENSMUSG00000064360 681.42 7080.19 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. Eef1a1 ENSMUSG00000037742 603.40 6269.54 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. mt-Co3 ENSMUSG00000064358 572.19 5945.26 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Hbb-y ENSMUSG00000052187 421.34 4377.87 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
17. Hmga2 ENSMUSG00000056758 379.72 3945.42 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
18. Gm13340 ENSMUSG00000083563 358.92 3729.31 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Tpt1 ENSMUSG00000060126 343.31 3567.11 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
20. Gm10800 ENSMUSG00000075014 332.91 3459.05 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
21. Igf2 ENSMUSG00000048583 312.10 3242.83 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
22. Pkm ENSMUSG00000032294 275.69 2864.52 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
23. Rpl4 ENSMUSG00000032399 270.49 2810.49 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
24. Cfl1 ENSMUSG00000056201 265.29 2756.46 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Tuba1b ENSMUSG00000023004 260.08 2702.32 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Tubb5 ENSMUSG00000001525 254.88 2648.29 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
27. mt-Nd5 ENSMUSG00000064367 228.87 2378.04 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
28. Rpsa ENSMUSG00000032518 218.47 2269.98 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
29. Ubb ENSMUSG00000019505 218.47 2269.98 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
30. Nedd4 ENSMUSG00000032216 213.27 2215.95 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
31. Npm1 ENSMUSG00000057113 213.27 2215.95 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
32. Pbx1 ENSMUSG00000052534 197.66 2053.76 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
33. Eif5a ENSMUSG00000078812 187.26 1945.70 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
34. Chchd2 ENSMUSG00000070493 176.86 1837.64 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
35. Grb10 ENSMUSG00000020176 176.86 1837.64 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
36. Hsp90ab1 ENSMUSG00000023944 171.66 1783.61 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
37. Col3a1 ENSMUSG00000026043 161.25 1675.44 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
38. Plagl1 ENSMUSG00000019817 161.25 1675.44 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
39. Ybx1 ENSMUSG00000028639 161.25 1675.44 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
40. Hnrnpa2b1 ENSMUSG00000004980 156.05 1621.41 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
41. Eif4g2 ENSMUSG00000005610 150.85 1567.38 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
42. Ywhab ENSMUSG00000018326 150.85 1567.38 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
43. Eef1b2 ENSMUSG00000025967 140.45 1459.32 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
44. Rpl37 ENSMUSG00000041841 140.45 1459.32 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
45. Rps20 ENSMUSG00000028234 140.45 1459.32 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
46. Rps26 ENSMUSG00000025362 140.45 1459.32 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
47. Ywhae ENSMUSG00000020849 140.45 1459.32 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
48. Atp5g3 ENSMUSG00000018770 135.24 1405.19 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
49. Hba-a1 ENSMUSG00000069919 135.24 1405.19 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
50. Hba-x ENSMUSG00000055609 135.24 1405.19 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
51. Morf4l1 ENSMUSG00000062270 135.24 1405.19 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
52. Banf1 ENSMUSG00000024844 130.04 1351.16 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
53. Fkbp1a ENSMUSG00000032966 130.04 1351.16 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
54. Hsp90aa1 ENSMUSG00000021270 130.04 1351.16 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
55. Pcbp1 ENSMUSG00000051695 130.04 1351.16 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
56. Peg3 ENSMUSG00000002265 130.04 1351.16 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
57. Rps5 ENSMUSG00000012848 130.04 1351.16 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
58. Rrm2 ENSMUSG00000020649 130.04 1351.16 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
59. Eef2 ENSMUSG00000034994 124.84 1297.13 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
60. Cdk4 ENSMUSG00000006728 119.64 1243.10 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
61. Cdkn1c ENSMUSG00000037664 119.64 1243.10 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
62. Ngfrap1 119.64 1243.10 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
63. Rpl23 ENSMUSG00000071415 119.64 1243.10 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
64. Gm14303 ENSMUSG00000081344 114.44 1189.07 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
65. Ndufa12 ENSMUSG00000020022 114.44 1189.07 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
66. Ago2 ENSMUSG00000036698 109.24 1135.04 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
67. Gm14586 ENSMUSG00000083621 109.24 1135.04 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
68. Hmgn1 ENSMUSG00000040681 109.24 1135.04 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
69. Hnrnpc ENSMUSG00000060373 109.24 1135.04 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
70. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 109.24 1135.04 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
71. Rpl32 ENSMUSG00000057841 109.24 1135.04 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
72. Myl6 ENSMUSG00000090841 104.03 1080.91 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
73. Ran ENSMUSG00000029430 104.03 1080.91 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
74. Rpl18a ENSMUSG00000045128 104.03 1080.91 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
75. Rplp1 ENSMUSG00000007892 104.03 1080.91 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
76. Rps4x ENSMUSG00000031320 104.03 1080.91 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
77. mt-Rnr1 ENSMUSG00000064337 104.03 1080.91 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
78. Anp32b ENSMUSG00000028333 98.83 1026.88 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
79. Cd24a ENSMUSG00000047139 98.83 1026.88 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
80. Gm5805 ENSMUSG00000061848 98.83 1026.88 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
81. H3f3b ENSMUSG00000016559 98.83 1026.88 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
82. Kpnb1 ENSMUSG00000001440 98.83 1026.88 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
83. Marcks ENSMUSG00000069662 98.83 1026.88 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
84. Meg3 ENSMUSG00000021268 98.83 1026.88 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
85. Paics ENSMUSG00000029247 98.83 1026.88 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
86. Rps3a1 ENSMUSG00000028081 98.83 1026.88 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
87. Trim28 ENSMUSG00000005566 98.83 1026.88 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
88. Ccnd2 ENSMUSG00000000184 93.63 972.85 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
89. Lbh ENSMUSG00000024063 93.63 972.85 limb-bud and heart [Source:MGI Symbol;Acc:MGI:1925139]
90. Rpl13a ENSMUSG00000074129 93.63 972.85 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
91. Tsc22d1 ENSMUSG00000022010 93.63 972.85 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
92. Cox8a ENSMUSG00000035885 88.43 918.82 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
93. Gm17132 ENSMUSG00000061331 88.43 918.82 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
94. Hnrnpk ENSMUSG00000021546 88.43 918.82 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
95. Igfbp4 ENSMUSG00000017493 88.43 918.82 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
96. Rps9 ENSMUSG00000006333 88.43 918.82 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
97. Serbp1 ENSMUSG00000036371 88.43 918.82 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
98. Serpinh1 ENSMUSG00000070436 88.43 918.82 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
99. Set ENSMUSG00000054766 88.43 918.82 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
100. Srsf3 ENSMUSG00000071172 88.43 918.82 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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