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Experiment Mouse_E11_5_slice_2, section s66.

Sample reads: 96,262. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4298.51 44654.49 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Nd1 ENSMUSG00000064341 3038.73 31567.44 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. Ptma ENSMUSG00000026238 2534.82 26332.64 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Atp6 ENSMUSG00000064357 2359.22 24508.44 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd4 ENSMUSG00000064363 2305.77 23953.18 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 2153.07 22366.88 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Co1 ENSMUSG00000064351 1427.75 14831.99 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Rnr2 ENSMUSG00000064339 1221.60 12690.43 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. Actb ENSMUSG00000029580 1084.17 11262.75 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Nd3 ENSMUSG00000064360 1084.17 11262.75 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Co3 ENSMUSG00000064358 710.06 7376.36 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. H19 ENSMUSG00000000031 694.79 7217.73 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Mdk ENSMUSG00000027239 694.79 7217.73 midkine [Source:MGI Symbol;Acc:MGI:96949]
14. mt-Nd2 ENSMUSG00000064345 641.34 6662.47 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Eef1a1 ENSMUSG00000037742 572.63 5948.69 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Gm13340 ENSMUSG00000083563 481.01 4996.91 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
17. Gm10800 ENSMUSG00000075014 458.10 4758.91 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
18. Hmga2 ENSMUSG00000056758 343.58 3569.23 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Igf2 ENSMUSG00000048583 343.58 3569.23 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
20. Nedd4 ENSMUSG00000032216 297.77 3093.34 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
21. Ubb ENSMUSG00000019505 297.77 3093.34 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
22. Npm1 ENSMUSG00000057113 282.50 2934.71 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. Tpt1 ENSMUSG00000060126 236.69 2458.82 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
24. Grb10 ENSMUSG00000020176 213.78 2220.82 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
25. Plagl1 ENSMUSG00000019817 213.78 2220.82 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
26. Rpl4 ENSMUSG00000032399 198.51 2062.19 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
27. Rps26 ENSMUSG00000025362 198.51 2062.19 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
28. Tubb5 ENSMUSG00000001525 198.51 2062.19 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
29. mt-Nd5 ENSMUSG00000064367 198.51 2062.19 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
30. Chchd2 ENSMUSG00000070493 190.88 1982.93 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
31. Fkbp1a ENSMUSG00000032966 190.88 1982.93 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
32. Tuba1b ENSMUSG00000023004 190.88 1982.93 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
33. Pbx1 ENSMUSG00000052534 183.24 1903.56 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
34. Peg3 ENSMUSG00000002265 183.24 1903.56 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
35. Pkm ENSMUSG00000032294 183.24 1903.56 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
36. Rpsa ENSMUSG00000032518 183.24 1903.56 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
37. Hbb-y ENSMUSG00000052187 175.61 1824.30 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
38. Hsp90ab1 ENSMUSG00000023944 167.97 1744.93 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
39. Ywhab ENSMUSG00000018326 160.34 1665.67 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
40. Set ENSMUSG00000054766 152.70 1586.30 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
41. Cdk1 ENSMUSG00000019942 145.07 1507.04 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
42. Cfl1 ENSMUSG00000056201 145.07 1507.04 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
43. Col1a1 ENSMUSG00000001506 145.07 1507.04 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
44. Col3a1 ENSMUSG00000026043 145.07 1507.04 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
45. Myl6 ENSMUSG00000090841 145.07 1507.04 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
46. Banf1 ENSMUSG00000024844 137.43 1427.67 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
47. Eif4g2 ENSMUSG00000005610 137.43 1427.67 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
48. H3f3b ENSMUSG00000016559 137.43 1427.67 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
49. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 137.43 1427.67 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
50. Rpl23 ENSMUSG00000071415 137.43 1427.67 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
51. Cdkn1c ENSMUSG00000037664 129.80 1348.41 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
52. Cdk4 ENSMUSG00000006728 122.16 1269.04 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
53. Atp5g3 ENSMUSG00000018770 114.53 1189.78 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
54. Eif5a ENSMUSG00000078812 114.53 1189.78 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
55. Marcks ENSMUSG00000069662 114.53 1189.78 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
56. Rpl18a ENSMUSG00000045128 114.53 1189.78 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
57. Sparc ENSMUSG00000018593 114.53 1189.78 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
58. Ybx1 ENSMUSG00000028639 114.53 1189.78 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
59. Gm5805 ENSMUSG00000061848 106.89 1110.41 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
60. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 106.89 1110.41 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
61. mt-Rnr1 ENSMUSG00000064337 106.89 1110.41 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
62. Capns1 ENSMUSG00000001794 99.26 1031.15 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
63. Crabp1 ENSMUSG00000032291 99.26 1031.15 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
64. Eef1b2 ENSMUSG00000025967 99.26 1031.15 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
65. Hsp90aa1 ENSMUSG00000021270 99.26 1031.15 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
66. Igfbp4 ENSMUSG00000017493 99.26 1031.15 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
67. Morf4l1 ENSMUSG00000062270 99.26 1031.15 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
68. Pabpc1 ENSMUSG00000022283 99.26 1031.15 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
69. Rpl32 ENSMUSG00000057841 99.26 1031.15 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
70. Rpl37 ENSMUSG00000041841 99.26 1031.15 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
71. Sub1 ENSMUSG00000022205 99.26 1031.15 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
72. Tsc22d1 ENSMUSG00000022010 99.26 1031.15 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
73. Dnaja1 ENSMUSG00000028410 91.62 951.78 DnaJ heat shock protein family (Hsp40) member A1 [Source:MGI Symbol;Acc:MGI:1270129]
74. Hmgn1 ENSMUSG00000040681 91.62 951.78 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
75. Hnrnph1 ENSMUSG00000007850 91.62 951.78 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
76. Rpl13 ENSMUSG00000000740 91.62 951.78 ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:105922]
77. Rpl41 ENSMUSG00000093674 91.62 951.78 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
78. Rps20 ENSMUSG00000028234 91.62 951.78 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
79. Slc38a2 ENSMUSG00000022462 91.62 951.78 solute carrier family 38, member 2 [Source:MGI Symbol;Acc:MGI:1915010]
80. Uqcrq ENSMUSG00000044894 91.62 951.78 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
81. Ywhaz ENSMUSG00000022285 91.62 951.78 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
82. Cbfb ENSMUSG00000031885 83.99 872.52 core binding factor beta [Source:MGI Symbol;Acc:MGI:99851]
83. Cdc42 ENSMUSG00000006699 83.99 872.52 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
84. Cox8a ENSMUSG00000035885 83.99 872.52 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
85. Elavl1 ENSMUSG00000040028 83.99 872.52 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Source:MGI Symbol;Acc:MGI:1100851]
86. Gm14303 ENSMUSG00000081344 83.99 872.52 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
87. Gm9844 ENSMUSG00000091955 83.99 872.52 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
88. Hnrnpa2b1 ENSMUSG00000004980 83.99 872.52 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
89. Igf1 ENSMUSG00000020053 83.99 872.52 insulin-like growth factor 1 [Source:MGI Symbol;Acc:MGI:96432]
90. Kpnb1 ENSMUSG00000001440 83.99 872.52 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
91. Lamp1 ENSMUSG00000031447 83.99 872.52 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
92. Lbh ENSMUSG00000024063 83.99 872.52 limb-bud and heart [Source:MGI Symbol;Acc:MGI:1925139]
93. Meg3 ENSMUSG00000021268 83.99 872.52 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
94. Ngfrap1 83.99 872.52 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
95. Rps5 ENSMUSG00000012848 83.99 872.52 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
96. Rps9 ENSMUSG00000006333 83.99 872.52 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
97. Rrm2 ENSMUSG00000020649 83.99 872.52 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
98. Sfrp1 ENSMUSG00000031548 83.99 872.52 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
99. Stmn1 ENSMUSG00000028832 83.99 872.52 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
100. Wbp5 83.99 872.52 WW domain binding protein 5
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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