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Experiment Mouse_E11_5_slice_2, section s64.

Sample reads: 96,250. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4289.95 44571.11 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Nd4 ENSMUSG00000064363 2431.28 25260.16 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
3. mt-Atp6 ENSMUSG00000064357 2309.25 23992.31 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2196.60 22821.92 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2074.57 21554.07 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. Ptma ENSMUSG00000026238 1717.86 17847.98 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Co1 ENSMUSG00000064351 1520.73 15799.86 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Rnr2 ENSMUSG00000064339 1004.43 10435.68 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Nd3 ENSMUSG00000064360 976.27 10143.11 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. Actb ENSMUSG00000029580 891.78 9265.29 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Co3 ENSMUSG00000064358 722.81 7509.75 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Eef1a1 ENSMUSG00000037742 675.88 7022.16 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. mt-Nd2 ENSMUSG00000064345 572.62 5949.33 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. H19 ENSMUSG00000000031 506.91 5266.62 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
15. Igf2 ENSMUSG00000048583 478.75 4974.05 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
16. Mdk ENSMUSG00000027239 478.75 4974.05 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. Gm10800 ENSMUSG00000075014 469.36 4876.49 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
18. Gm13340 ENSMUSG00000083563 384.88 3998.77 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Hmga2 ENSMUSG00000056758 366.10 3803.65 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
20. mt-Nd5 ENSMUSG00000064367 291.00 3023.39 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Tuba1b ENSMUSG00000023004 272.23 2828.38 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. Tpt1 ENSMUSG00000060126 262.84 2730.82 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
23. Cfl1 ENSMUSG00000056201 234.68 2438.24 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
24. Hsp90ab1 ENSMUSG00000023944 234.68 2438.24 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
25. Col3a1 ENSMUSG00000026043 215.91 2243.23 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
26. Nedd4 ENSMUSG00000032216 215.91 2243.23 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
27. Npm1 ENSMUSG00000057113 215.91 2243.23 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
28. Tubb5 ENSMUSG00000001525 215.91 2243.23 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
29. Hbb-y ENSMUSG00000052187 206.52 2145.67 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
30. Ubb ENSMUSG00000019505 206.52 2145.67 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
31. Rps4x ENSMUSG00000031320 187.74 1950.55 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
32. Eif4g2 ENSMUSG00000005610 168.97 1755.54 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Rpsa ENSMUSG00000032518 168.97 1755.54 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
34. Grb10 ENSMUSG00000020176 159.58 1657.98 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
35. Pbx1 ENSMUSG00000052534 159.58 1657.98 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
36. Pkm ENSMUSG00000032294 159.58 1657.98 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
37. Ybx1 ENSMUSG00000028639 159.58 1657.98 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
38. Eef1b2 ENSMUSG00000025967 150.20 1560.53 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
39. Hnrnpa2b1 ENSMUSG00000004980 150.20 1560.53 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
40. Hsp90aa1 ENSMUSG00000021270 150.20 1560.53 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
41. Wbp5 150.20 1560.53 WW domain binding protein 5
42. Myl6 ENSMUSG00000090841 140.81 1462.97 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
43. Ywhab ENSMUSG00000018326 140.81 1462.97 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
44. Chchd2 ENSMUSG00000070493 131.42 1365.41 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
45. Eif5a ENSMUSG00000078812 131.42 1365.41 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
46. Gm5805 ENSMUSG00000061848 131.42 1365.41 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
47. Hba-a1 ENSMUSG00000069919 131.42 1365.41 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
48. Paics ENSMUSG00000029247 131.42 1365.41 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
49. Peg3 ENSMUSG00000002265 131.42 1365.41 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
50. Rpl23 ENSMUSG00000071415 131.42 1365.41 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
51. Rps20 ENSMUSG00000028234 131.42 1365.41 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
52. mt-Rnr1 ENSMUSG00000064337 131.42 1365.41 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
53. Cdk4 ENSMUSG00000006728 122.03 1267.85 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
54. Cox8a ENSMUSG00000035885 122.03 1267.85 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
55. Hnrnpa0 ENSMUSG00000007836 122.03 1267.85 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
56. Ngfrap1 122.03 1267.85 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
57. Rpl18a ENSMUSG00000045128 122.03 1267.85 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
58. Rpl37 ENSMUSG00000041841 122.03 1267.85 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
59. Set ENSMUSG00000054766 122.03 1267.85 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
60. Ago2 ENSMUSG00000036698 112.65 1170.39 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
61. Banf1 ENSMUSG00000024844 112.65 1170.39 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
62. Eid1 ENSMUSG00000091337 112.65 1170.39 EP300 interacting inhibitor of differentiation 1 [Source:MGI Symbol;Acc:MGI:1889651]
63. Fkbp1a ENSMUSG00000032966 112.65 1170.39 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
64. Igf2r ENSMUSG00000023830 112.65 1170.39 insulin-like growth factor 2 receptor [Source:MGI Symbol;Acc:MGI:96435]
65. Pabpc1 ENSMUSG00000022283 112.65 1170.39 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
66. Plagl1 ENSMUSG00000019817 112.65 1170.39 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
67. Rpl4 ENSMUSG00000032399 112.65 1170.39 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
68. Rpl41 ENSMUSG00000093674 112.65 1170.39 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
69. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 112.65 1170.39 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
70. Sfrp1 ENSMUSG00000031548 112.65 1170.39 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
71. Tspan3 ENSMUSG00000032324 112.65 1170.39 tetraspanin 3 [Source:MGI Symbol;Acc:MGI:1928098]
72. 2810417H13Rik 103.26 1072.84 RIKEN cDNA 2810417H13 gene
73. Atxn7l3b ENSMUSG00000074748 103.26 1072.84 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
74. Marcks ENSMUSG00000069662 103.26 1072.84 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
75. Morf4l1 ENSMUSG00000062270 103.26 1072.84 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
76. Pbrm1 ENSMUSG00000042323 103.26 1072.84 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
77. Rps26 ENSMUSG00000025362 103.26 1072.84 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
78. Sparc ENSMUSG00000018593 103.26 1072.84 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
79. Trim28 ENSMUSG00000005566 103.26 1072.84 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
80. Calm1 ENSMUSG00000001175 93.87 975.28 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
81. Cdkn1c ENSMUSG00000037664 93.87 975.28 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
82. Col1a1 ENSMUSG00000001506 93.87 975.28 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
83. Eef2 ENSMUSG00000034994 93.87 975.28 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
84. Gm14303 ENSMUSG00000081344 93.87 975.28 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
85. H3f3b ENSMUSG00000016559 93.87 975.28 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
86. Hnrnph1 ENSMUSG00000007850 93.87 975.28 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
87. Igfbp5 ENSMUSG00000026185 93.87 975.28 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
88. Meg3 ENSMUSG00000021268 93.87 975.28 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
89. Rplp1 ENSMUSG00000007892 93.87 975.28 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
90. Slbp ENSMUSG00000004642 93.87 975.28 stem-loop binding protein [Source:MGI Symbol;Acc:MGI:108402]
91. Slc25a5 ENSMUSG00000016319 93.87 975.28 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
92. Calm2 ENSMUSG00000036438 84.48 877.72 calmodulin 2 [Source:MGI Symbol;Acc:MGI:103250]
93. Chd3 ENSMUSG00000018474 84.48 877.72 chromodomain helicase DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1344395]
94. Crabp1 ENSMUSG00000032291 84.48 877.72 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
95. Gm8292 ENSMUSG00000100215 84.48 877.72 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
96. Gnb1 ENSMUSG00000029064 84.48 877.72 guanine nucleotide binding protein (G protein), beta 1 [Source:MGI Symbol;Acc:MGI:95781]
97. Hmgn1 ENSMUSG00000040681 84.48 877.72 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
98. Hnrnpc ENSMUSG00000060373 84.48 877.72 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
99. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 84.48 877.72 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
100. Marcksl1 ENSMUSG00000047945 84.48 877.72 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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