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Experiment Mouse_E11_5_slice_2, section s60.

Sample reads: 96,260. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4212.91 43765.80 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2924.55 30381.67 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Co2 ENSMUSG00000064354 2589.22 26898.10 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
4. mt-Nd1 ENSMUSG00000064341 2402.44 24957.74 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 2370.09 24621.67 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. Ptma ENSMUSG00000026238 1997.25 20748.42 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Co1 ENSMUSG00000064351 1586.18 16478.02 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Co3 ENSMUSG00000064358 1028.04 10679.79 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
9. mt-Nd3 ENSMUSG00000064360 947.89 9847.15 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. H19 ENSMUSG00000000031 696.39 7234.44 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
11. mt-Rnr2 ENSMUSG00000064339 661.83 6875.42 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
12. mt-Nd2 ENSMUSG00000064345 636.83 6615.71 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
13. Eef1a1 ENSMUSG00000037742 630.21 6546.93 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Actb ENSMUSG00000029580 594.18 6172.64 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Mdk ENSMUSG00000027239 578.73 6012.13 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. Igf2 ENSMUSG00000048583 557.41 5790.65 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Gm13340 ENSMUSG00000083563 493.43 5126.00 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Hbb-y ENSMUSG00000052187 450.78 4682.93 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
19. Gm10800 ENSMUSG00000075014 266.20 2765.42 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
20. Tuba1b ENSMUSG00000023004 258.11 2681.37 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
21. mt-Nd5 ENSMUSG00000064367 251.50 2612.71 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
22. Hmga2 ENSMUSG00000056758 244.88 2543.93 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
23. Npm1 ENSMUSG00000057113 238.99 2482.75 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Rpsa ENSMUSG00000032518 236.05 2452.20 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
25. Tubb5 ENSMUSG00000001525 234.58 2436.93 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Hba-a1 ENSMUSG00000069919 227.96 2368.16 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
27. Tpt1 ENSMUSG00000060126 222.08 2307.08 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
28. Cfl1 ENSMUSG00000056201 213.99 2223.03 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
29. Ubb ENSMUSG00000019505 211.05 2192.49 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
30. Pkm ENSMUSG00000032294 186.05 1932.78 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
31. Rps26 ENSMUSG00000025362 186.05 1932.78 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
32. Nedd4 ENSMUSG00000032216 174.28 1810.51 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
33. Hba-x ENSMUSG00000055609 173.55 1802.92 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
34. Hsp90ab1 ENSMUSG00000023944 165.46 1718.88 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Rpl4 ENSMUSG00000032399 165.46 1718.88 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Chchd2 ENSMUSG00000070493 159.57 1657.69 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
37. Rpl23 ENSMUSG00000071415 158.10 1642.42 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
38. Peg3 ENSMUSG00000002265 152.22 1581.34 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
39. Eif4g2 ENSMUSG00000005610 151.49 1573.75 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
40. Atp5g3 ENSMUSG00000018770 141.19 1466.75 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
41. Rpl37 ENSMUSG00000041841 141.19 1466.75 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
42. Grb10 ENSMUSG00000020176 139.72 1451.48 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
43. Eef1b2 ENSMUSG00000025967 136.78 1420.94 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
44. Pbx1 ENSMUSG00000052534 136.04 1413.25 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
45. Tsc22d1 ENSMUSG00000022010 133.84 1390.40 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
46. Fkbp1a ENSMUSG00000032966 132.37 1375.13 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
47. Hsp90aa1 ENSMUSG00000021270 130.16 1352.17 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
48. Rps20 ENSMUSG00000028234 130.16 1352.17 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
49. Rpl18a ENSMUSG00000045128 129.42 1344.48 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
50. Rps4x ENSMUSG00000031320 129.42 1344.48 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
51. Gm5805 ENSMUSG00000061848 128.69 1336.90 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
52. Hbb-bh1 ENSMUSG00000052217 125.01 1298.67 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
53. Ybx1 ENSMUSG00000028639 123.54 1283.39 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
54. Hnrnpc ENSMUSG00000060373 122.81 1275.81 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
55. Acta2 ENSMUSG00000035783 122.07 1268.12 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
56. Myl6 ENSMUSG00000090841 121.34 1260.54 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
57. Col3a1 ENSMUSG00000026043 119.86 1245.17 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
58. Gm14303 ENSMUSG00000081344 119.86 1245.17 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
59. Eif5a ENSMUSG00000078812 119.13 1237.58 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
60. Itga6 ENSMUSG00000027111 116.92 1214.62 integrin alpha 6 [Source:MGI Symbol;Acc:MGI:96605]
61. Ywhab ENSMUSG00000018326 115.45 1199.35 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
62. Sfrp1 ENSMUSG00000031548 113.98 1184.08 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
63. Banf1 ENSMUSG00000024844 113.25 1176.50 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
64. Rplp1 ENSMUSG00000007892 110.30 1145.85 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
65. Hmgn1 ENSMUSG00000040681 109.57 1138.27 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
66. Paics ENSMUSG00000029247 108.10 1123.00 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
67. Wbp5 107.36 1115.31 WW domain binding protein 5
68. Col1a1 ENSMUSG00000001506 104.42 1084.77 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
69. Cdkn1c ENSMUSG00000037664 101.48 1054.22 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
70. Ngfrap1 101.48 1054.22 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
71. U2af2 ENSMUSG00000030435 100.75 1046.64 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
72. Ndufa12 ENSMUSG00000020022 99.27 1031.27 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
73. Hba-a2 ENSMUSG00000069917 98.54 1023.68 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
74. Pcbp1 ENSMUSG00000051695 98.54 1023.68 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
75. Ran ENSMUSG00000029430 97.07 1008.41 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
76. Tpm1 ENSMUSG00000032366 97.07 1008.41 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
77. Rpl32 ENSMUSG00000057841 95.60 993.14 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
78. Sparc ENSMUSG00000018593 93.39 970.18 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
79. Ywhae ENSMUSG00000020849 93.39 970.18 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
80. Trim28 ENSMUSG00000005566 92.66 962.60 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
81. Col1a2 ENSMUSG00000029661 91.92 954.91 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
82. Cdk4 ENSMUSG00000006728 91.19 947.33 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
83. Gm8292 ENSMUSG00000100215 90.45 939.64 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
84. Pabpc1 ENSMUSG00000022283 90.45 939.64 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
85. Cox8a ENSMUSG00000035885 88.98 924.37 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
86. Hnrnpa0 ENSMUSG00000007836 86.77 901.41 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
87. Set ENSMUSG00000054766 86.77 901.41 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
88. Hnrnpa2b1 ENSMUSG00000004980 85.30 886.14 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
89. Gm5963 ENSMUSG00000052192 84.57 878.56 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
90. Lamp1 ENSMUSG00000031447 84.57 878.56 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
91. Tmpo ENSMUSG00000019961 83.83 870.87 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
92. Eef2 ENSMUSG00000034994 83.10 863.28 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
93. Marcks ENSMUSG00000069662 83.10 863.28 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
94. Rps3a1 ENSMUSG00000028081 81.63 848.01 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
95. Rps5 ENSMUSG00000012848 80.89 840.33 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
96. Sub1 ENSMUSG00000022205 80.15 832.64 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
97. Anp32b ENSMUSG00000028333 77.21 802.10 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
98. Hnrnph1 ENSMUSG00000007850 77.21 802.10 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
99. Rps9 ENSMUSG00000006333 76.48 794.51 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
100. Tmsb4x ENSMUSG00000049775 75.01 779.24 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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