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Experiment Mouse_E11_5_slice_2, section s52.

Sample reads: 96,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3596.05 37362.93 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2440.78 25359.68 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Co2 ENSMUSG00000064354 2402.48 24961.75 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
4. mt-Atp6 ENSMUSG00000064357 2371.07 24635.40 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd4 ENSMUSG00000064363 2255.00 23429.43 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Nd1 ENSMUSG00000064341 2141.24 22247.47 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co1 ENSMUSG00000064351 1361.35 14144.41 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Rnr2 ENSMUSG00000064339 887.91 9225.38 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Co3 ENSMUSG00000064358 828.92 8612.47 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. mt-Nd3 ENSMUSG00000064360 826.23 8584.52 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. H19 ENSMUSG00000000031 800.57 8317.92 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
12. Hbb-y ENSMUSG00000052187 735.45 7641.32 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. Igf2 ENSMUSG00000048583 639.69 6646.37 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
14. Mdk ENSMUSG00000027239 628.96 6534.89 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. mt-Nd2 ENSMUSG00000064345 576.87 5993.67 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
16. Eef1a1 ENSMUSG00000037742 566.91 5890.19 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. Actb ENSMUSG00000029580 526.69 5472.30 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
18. Hmga2 ENSMUSG00000056758 374.62 3892.30 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Gm13340 ENSMUSG00000083563 342.44 3557.95 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Hba-a1 ENSMUSG00000069919 340.53 3538.10 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
21. Hba-x ENSMUSG00000055609 299.93 3116.27 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
22. Npm1 ENSMUSG00000057113 270.43 2809.77 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. mt-Nd5 ENSMUSG00000064367 267.75 2781.92 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
24. Rpsa ENSMUSG00000032518 253.19 2630.64 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
25. Cdkn1c ENSMUSG00000037664 252.05 2618.80 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
26. Tuba1b ENSMUSG00000023004 245.53 2551.05 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
27. Tpt1 ENSMUSG00000060126 237.49 2467.52 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
28. Cfl1 ENSMUSG00000056201 219.87 2284.45 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
29. Nedd4 ENSMUSG00000032216 216.42 2248.60 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
30. Ubb ENSMUSG00000019505 215.66 2240.71 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
31. Hsp90ab1 ENSMUSG00000023944 210.29 2184.91 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Tubb5 ENSMUSG00000001525 198.42 2061.58 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
33. Peg3 ENSMUSG00000002265 190.76 1981.99 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
34. Pkm ENSMUSG00000032294 190.37 1977.94 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
35. Set ENSMUSG00000054766 183.48 1906.36 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
36. Hbb-bh1 ENSMUSG00000052217 175.05 1818.77 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
37. Chchd2 ENSMUSG00000070493 172.37 1790.92 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
38. Pbx1 ENSMUSG00000052534 170.46 1771.08 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
39. Ybx1 ENSMUSG00000028639 167.01 1735.23 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
40. Atp5g3 ENSMUSG00000018770 162.03 1683.49 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
41. Rpl4 ENSMUSG00000032399 161.65 1679.54 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Fkbp1a ENSMUSG00000032966 160.50 1667.59 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
43. Hba-a2 ENSMUSG00000069917 157.43 1635.70 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
44. Rps26 ENSMUSG00000025362 151.30 1572.01 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
45. Eif4g2 ENSMUSG00000005610 146.71 1524.32 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
46. Grb10 ENSMUSG00000020176 142.49 1480.47 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
47. Rpl23 ENSMUSG00000071415 140.58 1460.62 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
48. Eef1b2 ENSMUSG00000025967 138.28 1436.73 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
49. Hnrnpc ENSMUSG00000060373 137.13 1424.78 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
50. Rps20 ENSMUSG00000028234 134.45 1396.93 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
51. Ywhab ENSMUSG00000018326 134.07 1392.99 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
52. Gm10800 ENSMUSG00000075014 131.39 1365.14 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
53. Eif5a ENSMUSG00000078812 128.70 1337.19 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
54. Rps4x ENSMUSG00000031320 125.26 1301.45 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
55. Ran ENSMUSG00000029430 124.87 1297.40 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
56. Hsp90aa1 ENSMUSG00000021270 119.89 1245.66 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
57. Col3a1 ENSMUSG00000026043 119.51 1241.71 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
58. Tmsb4x ENSMUSG00000049775 116.45 1209.91 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
59. Pabpc1 ENSMUSG00000022283 116.06 1205.86 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
60. Myl6 ENSMUSG00000090841 113.00 1174.07 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
61. Rpl18a ENSMUSG00000045128 110.70 1150.17 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
62. Gm14303 ENSMUSG00000081344 108.79 1130.33 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
63. Wbp5 108.79 1130.33 WW domain binding protein 5
64. Pcbp1 ENSMUSG00000051695 107.25 1114.33 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
65. Banf1 ENSMUSG00000024844 106.49 1106.43 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
66. Col1a2 ENSMUSG00000029661 104.96 1090.53 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
67. Rplp1 ENSMUSG00000007892 104.19 1082.53 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
68. Trim28 ENSMUSG00000005566 103.42 1074.53 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
69. Rps5 ENSMUSG00000012848 102.27 1062.58 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
70. Col1a1 ENSMUSG00000001506 101.12 1050.64 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
71. Gm5805 ENSMUSG00000061848 99.98 1038.79 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
72. Hmgn1 ENSMUSG00000040681 99.21 1030.79 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
73. U2af2 ENSMUSG00000030435 98.06 1018.84 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
74. Rpl37 ENSMUSG00000041841 94.23 979.05 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
75. Sparc ENSMUSG00000018593 93.46 971.05 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
76. Rpl32 ENSMUSG00000057841 88.10 915.36 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
77. Ago2 ENSMUSG00000036698 87.72 911.41 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
78. Eef2 ENSMUSG00000034994 87.33 907.36 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
79. Hnrnpa0 ENSMUSG00000007836 86.95 903.41 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
80. Rps3a1 ENSMUSG00000028081 86.57 899.46 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
81. mt-Rnr1 ENSMUSG00000064337 86.57 899.46 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
82. Cdk4 ENSMUSG00000006728 85.80 891.46 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
83. Ywhae ENSMUSG00000020849 85.42 887.51 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
84. Paics ENSMUSG00000029247 85.04 883.56 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
85. Marcks ENSMUSG00000069662 83.89 871.62 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
86. Rpl8 ENSMUSG00000003970 83.89 871.62 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
87. Rps9 ENSMUSG00000006333 83.89 871.62 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
88. Ngfrap1 83.50 867.56 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
89. Tpm4 ENSMUSG00000031799 83.50 867.56 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
90. Ndufa12 ENSMUSG00000020022 82.74 859.67 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
91. Tpm1 ENSMUSG00000032366 82.74 859.67 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
92. Anp32b ENSMUSG00000028333 81.97 851.67 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
93. Cox8a ENSMUSG00000035885 81.21 843.77 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
94. Rpl39-ps ENSMUSG00000036305 80.82 839.72 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
95. Malat1 ENSMUSG00000092341 80.44 835.77 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
96. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 79.67 827.77 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
97. Basp1 ENSMUSG00000045763 78.52 815.82 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
98. Gpc3 ENSMUSG00000055653 77.76 807.93 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
99. Marcksl1 ENSMUSG00000047945 77.76 807.93 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
100. Ddx39b ENSMUSG00000019432 77.38 803.98 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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