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Experiment Mouse_E11_5_slice_2, section s47.

Sample reads: 96,258. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4186.09 43488.04 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2887.23 29994.57 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Nd1 ENSMUSG00000064341 2817.67 29271.93 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Nd4 ENSMUSG00000064363 2689.88 27944.36 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Atp6 ENSMUSG00000064357 2611.63 27131.44 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Co2 ENSMUSG00000064354 2599.46 27005.01 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Co1 ENSMUSG00000064351 1583.15 16446.87 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Rnr2 ENSMUSG00000064339 1056.30 10973.59 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Nd3 ENSMUSG00000064360 941.54 9781.38 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. H19 ENSMUSG00000000031 886.77 9212.39 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
11. mt-Co3 ENSMUSG00000064358 825.92 8580.24 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Actb ENSMUSG00000029580 709.42 7369.95 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. mt-Nd2 ENSMUSG00000064345 629.43 6538.96 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. Mdk ENSMUSG00000027239 549.45 5708.07 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. Eef1a1 ENSMUSG00000037742 525.98 5464.25 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Igf2 ENSMUSG00000048583 489.46 5084.85 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Gm13340 ENSMUSG00000083563 398.18 4136.57 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Hmga2 ENSMUSG00000056758 392.96 4082.34 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Hbb-y ENSMUSG00000052187 325.15 3377.89 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
20. Npm1 ENSMUSG00000057113 285.16 2962.44 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Tuba1b ENSMUSG00000023004 272.12 2826.97 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. mt-Nd5 ENSMUSG00000064367 272.12 2826.97 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
23. Rpsa ENSMUSG00000032518 237.34 2465.65 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
24. Tubb5 ENSMUSG00000001525 233.00 2420.57 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
25. Ubb ENSMUSG00000019505 231.26 2402.49 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
26. Pbx1 ENSMUSG00000052534 217.35 2257.98 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
27. Cfl1 ENSMUSG00000056201 198.22 2059.25 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
28. Peg3 ENSMUSG00000002265 195.61 2032.13 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
29. Cdkn1c ENSMUSG00000037664 194.74 2023.10 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
30. Pkm ENSMUSG00000032294 193.00 2005.02 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
31. Nedd4 ENSMUSG00000032216 191.26 1986.94 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
32. Hsp90ab1 ENSMUSG00000023944 180.83 1878.59 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
33. Tpt1 ENSMUSG00000060126 179.96 1869.55 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Hba-x ENSMUSG00000055609 174.75 1815.43 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
35. Rpl4 ENSMUSG00000032399 171.27 1779.27 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Set ENSMUSG00000054766 159.97 1661.88 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
37. Hnrnpc ENSMUSG00000060373 155.62 1616.69 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
38. Eif4g2 ENSMUSG00000005610 154.75 1607.65 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
39. Hba-a1 ENSMUSG00000069919 149.53 1553.42 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
40. Col3a1 ENSMUSG00000026043 146.06 1517.37 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
41. Rpl23 ENSMUSG00000071415 139.97 1454.11 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
42. Myl6 ENSMUSG00000090841 138.23 1436.03 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
43. Rps4x ENSMUSG00000031320 136.49 1417.95 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
44. Rps26 ENSMUSG00000025362 132.15 1372.87 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
45. Chchd2 ENSMUSG00000070493 129.54 1345.75 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
46. Rps20 ENSMUSG00000028234 129.54 1345.75 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
47. Eef1b2 ENSMUSG00000025967 127.80 1327.68 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
48. Eif5a ENSMUSG00000078812 127.80 1327.68 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
49. Grb10 ENSMUSG00000020176 127.80 1327.68 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
50. Wbp5 125.19 1300.56 WW domain binding protein 5
51. Ywhab ENSMUSG00000018326 123.45 1282.49 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
52. Fkbp1a ENSMUSG00000032966 121.71 1264.41 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
53. Hsp90aa1 ENSMUSG00000021270 119.11 1237.40 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
54. Ybx1 ENSMUSG00000028639 114.76 1192.21 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
55. Rpl18a ENSMUSG00000045128 113.02 1174.13 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
56. Ran ENSMUSG00000029430 111.28 1156.05 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
57. Acta2 ENSMUSG00000035783 110.41 1147.02 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
58. Gm10800 ENSMUSG00000075014 109.54 1137.98 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
59. Tmsb4x ENSMUSG00000049775 106.06 1101.83 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
60. Atp5g3 ENSMUSG00000018770 105.20 1092.89 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
61. 2810417H13Rik 99.11 1029.62 RIKEN cDNA 2810417H13 gene
62. Rps5 ENSMUSG00000012848 99.11 1029.62 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
63. Pabpc1 ENSMUSG00000022283 97.37 1011.55 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
64. Hmgn1 ENSMUSG00000040681 96.50 1002.51 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
65. U2af2 ENSMUSG00000030435 96.50 1002.51 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
66. Actc1 ENSMUSG00000068614 95.63 993.47 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
67. Rps3a1 ENSMUSG00000028081 93.02 966.36 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
68. Serbp1 ENSMUSG00000036371 91.29 948.38 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
69. Meg3 ENSMUSG00000021268 90.42 939.35 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
70. Paics ENSMUSG00000029247 90.42 939.35 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
71. Malat1 ENSMUSG00000092341 89.55 930.31 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
72. Banf1 ENSMUSG00000024844 88.68 921.27 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
73. Gm14303 ENSMUSG00000081344 88.68 921.27 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
74. Gm5805 ENSMUSG00000061848 88.68 921.27 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
75. Rpl32 ENSMUSG00000057841 88.68 921.27 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
76. Rplp1 ENSMUSG00000007892 88.68 921.27 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
77. Sub1 ENSMUSG00000022205 86.94 903.19 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
78. H3f3b ENSMUSG00000016559 85.20 885.12 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
79. Rpl37 ENSMUSG00000041841 85.20 885.12 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
80. Tpm1 ENSMUSG00000032366 84.33 876.08 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
81. Cdk4 ENSMUSG00000006728 82.59 858.00 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
82. Ddx5 ENSMUSG00000020719 82.59 858.00 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
83. Ago2 ENSMUSG00000036698 81.72 848.96 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
84. Hnrnpk ENSMUSG00000021546 81.72 848.96 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
85. Marcks ENSMUSG00000069662 80.85 839.93 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
86. Gm14586 ENSMUSG00000083621 79.98 830.89 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
87. Tpm4 ENSMUSG00000031799 79.98 830.89 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
88. Eef2 ENSMUSG00000034994 79.11 821.85 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
89. Rpl26 ENSMUSG00000060938 79.11 821.85 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
90. Gpc3 ENSMUSG00000055653 78.24 812.81 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
91. Son ENSMUSG00000022961 78.24 812.81 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
92. Hba-a2 ENSMUSG00000069917 77.38 803.88 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
93. Hnrnph1 ENSMUSG00000007850 77.38 803.88 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
94. Hbb-bh1 ENSMUSG00000052217 76.51 794.84 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
95. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 76.51 794.84 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
96. Rps9 ENSMUSG00000006333 75.64 785.80 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
97. Col1a2 ENSMUSG00000029661 74.77 776.76 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
98. Ndufa12 ENSMUSG00000020022 74.77 776.76 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
99. Hnrnpa2b1 ENSMUSG00000004980 73.90 767.73 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
100. Pcbp1 ENSMUSG00000051695 73.90 767.73 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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