Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_2, section s32.

Sample reads: 96,256. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4208.19 43718.93 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2788.20 28966.64 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2652.86 27560.59 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd4 ENSMUSG00000064363 2405.10 24986.61 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 2365.90 24579.36 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Co2 ENSMUSG00000064354 2281.59 23703.46 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Co1 ENSMUSG00000064351 1412.59 14675.41 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. H19 ENSMUSG00000000031 1216.60 12639.27 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
9. mt-Nd3 ENSMUSG00000064360 900.80 9358.42 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Co3 ENSMUSG00000064358 825.37 8574.78 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
11. Igf2 ENSMUSG00000048583 741.06 7698.88 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
12. Mdk ENSMUSG00000027239 688.55 7153.35 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. Eef1a1 ENSMUSG00000037742 676.71 7030.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Actb ENSMUSG00000029580 661.92 6876.69 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. mt-Nd2 ENSMUSG00000064345 633.82 6584.76 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
16. mt-Rnr2 ENSMUSG00000064339 514.74 5347.64 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
17. Hbb-y ENSMUSG00000052187 487.38 5063.40 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
18. Gm13340 ENSMUSG00000083563 395.67 4110.62 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Npm1 ENSMUSG00000057113 278.08 2888.98 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. Hmga2 ENSMUSG00000056758 272.16 2827.47 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
21. Hba-a1 ENSMUSG00000069919 257.37 2673.82 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
22. Tuba1b ENSMUSG00000023004 252.20 2620.11 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Hba-x ENSMUSG00000055609 248.50 2581.67 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
24. Nedd4 ENSMUSG00000032216 233.71 2428.02 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
25. Rpsa ENSMUSG00000032518 227.79 2366.51 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
26. Tpt1 ENSMUSG00000060126 227.05 2358.82 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
27. mt-Nd5 ENSMUSG00000064367 225.57 2343.45 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
28. Ubb ENSMUSG00000019505 219.65 2281.95 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
29. Cfl1 ENSMUSG00000056201 216.70 2251.30 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
30. Cdkn1c ENSMUSG00000037664 181.94 1890.18 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
31. Tubb5 ENSMUSG00000001525 180.46 1874.80 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
32. Eif4g2 ENSMUSG00000005610 176.76 1836.36 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Rps26 ENSMUSG00000025362 173.80 1805.61 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
34. Grb10 ENSMUSG00000020176 168.62 1751.79 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
35. Hsp90ab1 ENSMUSG00000023944 164.93 1713.46 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
36. Rpl4 ENSMUSG00000032399 161.97 1682.71 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
37. Set ENSMUSG00000054766 161.97 1682.71 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
38. Peg3 ENSMUSG00000002265 150.87 1567.39 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
39. Hnrnpc ENSMUSG00000060373 148.65 1544.33 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
40. Ybx1 ENSMUSG00000028639 148.65 1544.33 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
41. Pkm ENSMUSG00000032294 143.48 1490.62 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
42. Chchd2 ENSMUSG00000070493 140.52 1459.86 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
43. Rpl23 ENSMUSG00000071415 138.30 1436.80 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
44. Rps20 ENSMUSG00000028234 137.56 1429.11 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
45. Col3a1 ENSMUSG00000026043 134.60 1398.36 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
46. Pcbp1 ENSMUSG00000051695 133.12 1382.99 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
47. Ran ENSMUSG00000029430 132.38 1375.30 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
48. Atp5g3 ENSMUSG00000018770 131.64 1367.61 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
49. Ywhab ENSMUSG00000018326 131.64 1367.61 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
50. Rpl18a ENSMUSG00000045128 127.21 1321.59 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
51. Eef1b2 ENSMUSG00000025967 124.99 1298.52 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
52. Hba-a2 ENSMUSG00000069917 124.99 1298.52 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
53. Eif5a ENSMUSG00000078812 119.07 1237.02 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
54. Myl6 ENSMUSG00000090841 116.11 1206.27 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
55. Hbb-bh1 ENSMUSG00000052217 114.63 1190.89 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
56. Rps4x ENSMUSG00000031320 111.68 1160.24 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
57. Tmsb4x ENSMUSG00000049775 111.68 1160.24 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
58. Hsp90aa1 ENSMUSG00000021270 110.94 1152.56 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
59. U2af2 ENSMUSG00000030435 110.94 1152.56 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
60. Pbx1 ENSMUSG00000052534 109.46 1137.18 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
61. Paics ENSMUSG00000029247 108.72 1129.49 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
62. Pabpc1 ENSMUSG00000022283 107.24 1114.12 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
63. Rplp1 ENSMUSG00000007892 105.02 1091.05 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
64. H3f3b ENSMUSG00000016559 103.54 1075.68 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
65. Rps5 ENSMUSG00000012848 101.32 1052.61 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
66. Col2a1 ENSMUSG00000022483 100.58 1044.93 collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]
67. Trim28 ENSMUSG00000005566 100.58 1044.93 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
68. Rps3a1 ENSMUSG00000028081 99.10 1029.55 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
69. Gm5805 ENSMUSG00000061848 97.62 1014.18 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
70. Hnrnpa2b1 ENSMUSG00000004980 96.88 1006.49 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
71. Wbp5 95.41 991.22 WW domain binding protein 5
72. Ccnd2 ENSMUSG00000000184 94.67 983.53 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
73. Marcks ENSMUSG00000069662 94.67 983.53 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
74. Meg3 ENSMUSG00000021268 94.67 983.53 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
75. Anp32b ENSMUSG00000028333 93.19 968.15 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
76. Banf1 ENSMUSG00000024844 93.19 968.15 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
77. Actc1 ENSMUSG00000068614 92.45 960.46 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
78. Fkbp1a ENSMUSG00000032966 92.45 960.46 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
79. Rrm2 ENSMUSG00000020649 91.71 952.78 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
80. Tpm1 ENSMUSG00000032366 90.97 945.09 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
81. Gm14303 ENSMUSG00000081344 89.49 929.71 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
82. Tmsb10 ENSMUSG00000079523 89.49 929.71 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
83. Ywhae ENSMUSG00000020849 89.49 929.71 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
84. Hmgn1 ENSMUSG00000040681 87.27 906.65 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
85. Rpl8 ENSMUSG00000003970 87.27 906.65 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
86. Ago2 ENSMUSG00000036698 86.53 898.96 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
87. Rps9 ENSMUSG00000006333 86.53 898.96 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
88. Prdx1 ENSMUSG00000028691 85.79 891.27 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
89. Cdk4 ENSMUSG00000006728 85.05 883.59 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
90. Cox8a ENSMUSG00000035885 85.05 883.59 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
91. Ndufa12 ENSMUSG00000020022 85.05 883.59 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
92. Rpl32 ENSMUSG00000057841 82.83 860.52 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
93. Rpl37 ENSMUSG00000041841 82.83 860.52 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
94. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 82.09 852.83 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
95. mt-Rnr1 ENSMUSG00000064337 82.09 852.83 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
96. Tmpo ENSMUSG00000019961 79.13 822.08 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
97. Fscn1 ENSMUSG00000029581 78.40 814.50 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
98. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 78.40 814.50 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
99. Sub1 ENSMUSG00000022205 78.40 814.50 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
100. Hnrnpa0 ENSMUSG00000007836 77.66 806.81 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA