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Experiment Mouse_E11_5_slice_2, section s26.

Sample reads: 96,263. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3269.87 33968.24 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2582.84 26831.20 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2504.10 26013.23 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd4 ENSMUSG00000064363 2143.28 22264.94 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 1791.98 18615.54 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Co2 ENSMUSG00000064354 1637.10 17006.61 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Co1 ENSMUSG00000064351 1245.99 12943.66 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Co3 ENSMUSG00000064358 792.59 8233.63 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
9. H19 ENSMUSG00000000031 789.13 8197.68 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. mt-Nd3 ENSMUSG00000064360 693.95 7208.93 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. Eef1a1 ENSMUSG00000037742 592.71 6157.22 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. Actb ENSMUSG00000029580 521.76 5420.18 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. Hbb-y ENSMUSG00000052187 508.78 5285.34 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
14. Mdk ENSMUSG00000027239 469.84 4880.82 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. mt-Nd2 ENSMUSG00000064345 440.42 4575.19 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
16. Igf2 ENSMUSG00000048583 431.77 4485.34 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. mt-Rnr2 ENSMUSG00000064339 427.44 4440.36 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
18. Tubb2b ENSMUSG00000045136 411.00 4269.57 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
19. Gm13340 ENSMUSG00000083563 408.41 4242.67 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Cfl1 ENSMUSG00000056201 337.46 3505.62 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
21. Tubb5 ENSMUSG00000001525 269.97 2804.52 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
22. Hba-a1 ENSMUSG00000069919 265.64 2759.54 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
23. Hba-x ENSMUSG00000055609 260.45 2705.62 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
24. Ubb ENSMUSG00000019505 245.74 2552.81 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
25. Nedd4 ENSMUSG00000032216 240.55 2498.89 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Rpsa ENSMUSG00000032518 239.68 2489.86 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Tpt1 ENSMUSG00000060126 237.08 2462.85 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
28. Tuba1b ENSMUSG00000023004 236.22 2453.91 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
29. Npm1 ENSMUSG00000057113 234.49 2435.94 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
30. mt-Nd5 ENSMUSG00000064367 225.84 2346.08 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
31. Cdkn1c ENSMUSG00000037664 219.78 2283.13 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
32. Eif4g2 ENSMUSG00000005610 200.74 2085.34 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Tuba1a ENSMUSG00000072235 197.28 2049.39 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
34. Pkm ENSMUSG00000032294 193.82 2013.45 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
35. Tmsb4x ENSMUSG00000049775 186.03 1932.53 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
36. Hsp90aa1 ENSMUSG00000021270 178.25 1851.71 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
37. Chchd2 ENSMUSG00000070493 166.13 1725.80 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
38. Rpl18a ENSMUSG00000045128 166.13 1725.80 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
39. Ybx1 ENSMUSG00000028639 156.61 1626.90 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
40. Rps26 ENSMUSG00000025362 154.88 1608.93 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
41. Hmga2 ENSMUSG00000056758 151.42 1572.99 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
42. Hsp90ab1 ENSMUSG00000023944 151.42 1572.99 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
43. Rpl4 ENSMUSG00000032399 151.42 1572.99 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
44. Map1b ENSMUSG00000052727 146.23 1519.07 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
45. Eef1b2 ENSMUSG00000025967 143.64 1492.17 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
46. Rpl23 ENSMUSG00000071415 143.64 1492.17 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
47. Rps20 ENSMUSG00000028234 142.77 1483.13 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
48. Rps4x ENSMUSG00000031320 140.17 1456.12 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
49. Gm14303 ENSMUSG00000081344 138.44 1438.15 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
50. Hnrnpc ENSMUSG00000060373 135.85 1411.24 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
51. Atp5g3 ENSMUSG00000018770 134.12 1393.27 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
52. Marcks ENSMUSG00000069662 132.39 1375.30 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
53. Banf1 ENSMUSG00000024844 123.73 1285.34 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
54. Hba-a2 ENSMUSG00000069917 123.73 1285.34 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
55. Eif5a ENSMUSG00000078812 122.87 1276.40 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
56. Grb10 ENSMUSG00000020176 121.14 1258.43 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
57. Ran ENSMUSG00000029430 117.68 1222.49 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
58. U2af2 ENSMUSG00000030435 117.68 1222.49 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
59. Pcbp1 ENSMUSG00000051695 113.35 1177.51 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
60. Ywhae ENSMUSG00000020849 111.62 1159.54 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
61. Ywhab ENSMUSG00000018326 110.75 1150.50 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
62. Hnrnpa2b1 ENSMUSG00000004980 109.89 1141.57 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
63. Ndufa12 ENSMUSG00000020022 107.29 1114.56 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
64. Basp1 ENSMUSG00000045763 106.43 1105.62 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
65. Cd24a ENSMUSG00000047139 105.56 1096.58 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
66. Fkbp1a ENSMUSG00000032966 104.70 1087.65 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
67. Col3a1 ENSMUSG00000026043 100.37 1042.67 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
68. Cdk4 ENSMUSG00000006728 99.51 1033.74 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
69. Rps5 ENSMUSG00000012848 96.91 1006.73 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
70. H3f3b ENSMUSG00000016559 95.18 988.75 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
71. Paics ENSMUSG00000029247 95.18 988.75 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
72. Rps3a1 ENSMUSG00000028081 95.18 988.75 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
73. Ddx5 ENSMUSG00000020719 94.31 979.72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
74. Gm15459 ENSMUSG00000100801 93.45 970.78 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
75. Nnat ENSMUSG00000067786 93.45 970.78 neuronatin [Source:MGI Symbol;Acc:MGI:104716]
76. Rpl37 ENSMUSG00000041841 93.45 970.78 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
77. Sub1 ENSMUSG00000022205 92.58 961.74 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
78. Hnrnpa0 ENSMUSG00000007836 91.72 952.81 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
79. Hnrnpk ENSMUSG00000021546 89.99 934.84 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
80. Gm9844 ENSMUSG00000091955 89.12 925.80 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
81. Ddx39b ENSMUSG00000019432 88.26 916.87 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
82. Hmgn1 ENSMUSG00000040681 88.26 916.87 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
83. Pabpc1 ENSMUSG00000022283 88.26 916.87 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
84. Fscn1 ENSMUSG00000029581 87.39 907.83 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
85. Hbb-bh1 ENSMUSG00000052217 87.39 907.83 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
86. Rpl32 ENSMUSG00000057841 87.39 907.83 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
87. Tmsb10 ENSMUSG00000079523 86.53 898.90 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
88. Rpl41 ENSMUSG00000093674 85.66 889.86 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
89. Scd2 ENSMUSG00000025203 85.66 889.86 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
90. Rplp1 ENSMUSG00000007892 84.80 880.92 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
91. Trim28 ENSMUSG00000005566 84.80 880.92 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
92. Sfpq ENSMUSG00000028820 83.93 871.89 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
93. Srsf3 ENSMUSG00000071172 83.93 871.89 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
94. Tecr ENSMUSG00000031708 83.07 862.95 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
95. Morf4l1 ENSMUSG00000062270 82.20 853.91 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
96. Pdia6 ENSMUSG00000020571 82.20 853.91 protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
97. Stmn1 ENSMUSG00000028832 82.20 853.91 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
98. Anp32b ENSMUSG00000028333 81.34 844.98 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
99. Cox8a ENSMUSG00000035885 81.34 844.98 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
100. Ssbp3 ENSMUSG00000061887 81.34 844.98 single-stranded DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1919725]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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