Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_2, section s2.

Sample reads: 96,251. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3590.99 37308.50 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Nd4 ENSMUSG00000064363 2922.90 30367.40 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
3. mt-Atp6 ENSMUSG00000064357 2129.54 22124.80 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co1 ENSMUSG00000064351 1879.01 19521.93 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
5. mt-Co2 ENSMUSG00000064354 1753.74 18220.44 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. Hbb-y ENSMUSG00000052187 1544.96 16051.32 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
7. Ptma ENSMUSG00000026238 1252.67 13014.58 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
8. mt-Rnr2 ENSMUSG00000064339 1210.92 12580.82 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Nd1 ENSMUSG00000064341 1127.40 11713.09 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
10. Hba-a1 ENSMUSG00000069919 1002.14 10411.71 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
11. mt-Nd2 ENSMUSG00000064345 876.87 9110.22 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Gm13340 ENSMUSG00000083563 709.85 7374.97 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
13. Hba-x ENSMUSG00000055609 709.85 7374.97 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
14. Eef1a1 ENSMUSG00000037742 626.34 6507.34 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. mt-Nd5 ENSMUSG00000064367 501.07 5205.85 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
16. Map1b ENSMUSG00000052727 375.80 3904.36 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
17. Npm1 ENSMUSG00000057113 375.80 3904.36 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
18. Chchd2 ENSMUSG00000070493 334.05 3470.60 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
19. Rpl4 ENSMUSG00000032399 334.05 3470.60 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
20. mt-Co3 ENSMUSG00000064358 334.05 3470.60 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
21. mt-Nd3 ENSMUSG00000064360 334.05 3470.60 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
22. Cfl1 ENSMUSG00000056201 292.29 3036.74 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
23. Hba-a2 ENSMUSG00000069917 292.29 3036.74 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
24. Hbb-bh1 ENSMUSG00000052217 292.29 3036.74 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
25. Mdk ENSMUSG00000027239 292.29 3036.74 midkine [Source:MGI Symbol;Acc:MGI:96949]
26. Rpsa ENSMUSG00000032518 292.29 3036.74 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Tuba1a ENSMUSG00000072235 292.29 3036.74 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
28. Ddx5 ENSMUSG00000020719 250.53 2602.88 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
29. Tubb5 ENSMUSG00000001525 250.53 2602.88 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
30. Actb ENSMUSG00000029580 208.78 2169.11 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
31. H19 ENSMUSG00000000031 208.78 2169.11 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
32. Hnrnpa0 ENSMUSG00000007836 208.78 2169.11 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
33. Nedd4 ENSMUSG00000032216 208.78 2169.11 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
34. Pkm ENSMUSG00000032294 208.78 2169.11 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
35. Rplp1 ENSMUSG00000007892 208.78 2169.11 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
36. Set ENSMUSG00000054766 208.78 2169.11 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
37. Srsf6 ENSMUSG00000016921 208.78 2169.11 serine/arginine-rich splicing factor 6 [Source:MGI Symbol;Acc:MGI:1915246]
38. Tuba1b ENSMUSG00000023004 208.78 2169.11 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
39. U2af2 ENSMUSG00000030435 208.78 2169.11 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
40. Ywhae ENSMUSG00000020849 208.78 2169.11 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
41. Cd24a ENSMUSG00000047139 167.02 1735.25 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
42. Dhx15 ENSMUSG00000029169 167.02 1735.25 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:MGI Symbol;Acc:MGI:1099786]
43. Eif5a ENSMUSG00000078812 167.02 1735.25 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
44. Gm10800 ENSMUSG00000075014 167.02 1735.25 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
45. Grb10 ENSMUSG00000020176 167.02 1735.25 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
46. Hint1 ENSMUSG00000020267 167.02 1735.25 histidine triad nucleotide binding protein 1 [Source:MGI Symbol;Acc:MGI:1321133]
47. Hmgn1 ENSMUSG00000040681 167.02 1735.25 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
48. Hnrnpk ENSMUSG00000021546 167.02 1735.25 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
49. Hsp90ab1 ENSMUSG00000023944 167.02 1735.25 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
50. Igf2 ENSMUSG00000048583 167.02 1735.25 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
51. Lamp1 ENSMUSG00000031447 167.02 1735.25 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
52. Pbx1 ENSMUSG00000052534 167.02 1735.25 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
53. Rpl8 ENSMUSG00000003970 167.02 1735.25 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
54. Serbp1 ENSMUSG00000036371 167.02 1735.25 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
55. Tead2 ENSMUSG00000030796 167.02 1735.25 TEA domain family member 2 [Source:MGI Symbol;Acc:MGI:104904]
56. Tpt1 ENSMUSG00000060126 167.02 1735.25 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
57. Ube2c ENSMUSG00000001403 167.02 1735.25 ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]
58. Ypel3 ENSMUSG00000042675 167.02 1735.25 yippee like 3 [Source:MGI Symbol;Acc:MGI:1913340]
59. Ywhab ENSMUSG00000018326 167.02 1735.25 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
60. Ankrd13c ENSMUSG00000039988 125.27 1301.49 ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
61. Anp32b ENSMUSG00000028333 125.27 1301.49 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
62. Arf4 ENSMUSG00000021877, ENSMUSG00000115861 125.27 1301.49 ADP-ribosylation factor 4 [Source:MGI Symbol;Acc:MGI:99433]
63. Atp5g3 ENSMUSG00000018770 125.27 1301.49 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
64. Banf1 ENSMUSG00000024844 125.27 1301.49 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
65. Cct6a ENSMUSG00000029447 125.27 1301.49 chaperonin containing Tcp1, subunit 6a (zeta) [Source:MGI Symbol;Acc:MGI:107943]
66. Cdk1 ENSMUSG00000019942 125.27 1301.49 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
67. Crabp1 ENSMUSG00000032291 125.27 1301.49 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
68. Cyb5r3 ENSMUSG00000018042 125.27 1301.49 cytochrome b5 reductase 3 [Source:MGI Symbol;Acc:MGI:94893]
69. Ddx39b ENSMUSG00000019432 125.27 1301.49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
70. Eef1b2 ENSMUSG00000025967 125.27 1301.49 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
71. Eef1g ENSMUSG00000071644 125.27 1301.49 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
72. Eif4g2 ENSMUSG00000005610 125.27 1301.49 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
73. Erdr1 125.27 1301.49 erythroid differentiation regulator 1, transcript variant 1, non-coding
74. Fam193a ENSMUSG00000037210 125.27 1301.49 family with sequence similarity 193, member A [Source:MGI Symbol;Acc:MGI:2447768]
75. Gm10073 ENSMUSG00000060019 125.27 1301.49 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
76. Gm10076 ENSMUSG00000060143 125.27 1301.49 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
77. Gnas ENSMUSG00000027523 125.27 1301.49 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus [Source:MGI Symbol;Acc:MGI:95777]
78. Gnb2l1 Gnb2l1 125.27 1301.49
79. Hbb-bt ENSMUSG00000073940 125.27 1301.49 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
80. Hnrnpa1 ENSMUSG00000046434 125.27 1301.49 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
81. Hnrnpc ENSMUSG00000060373 125.27 1301.49 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
82. Hnrnpdl ENSMUSG00000029328 125.27 1301.49 heterogeneous nuclear ribonucleoprotein D-like [Source:MGI Symbol;Acc:MGI:1355299]
83. Hnrnph1 ENSMUSG00000007850 125.27 1301.49 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
84. Hsp90aa1 ENSMUSG00000021270 125.27 1301.49 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
85. Malat1 ENSMUSG00000092341 125.27 1301.49 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
86. Marcks ENSMUSG00000069662 125.27 1301.49 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
87. Myl6 ENSMUSG00000090841 125.27 1301.49 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
88. Pabpc1 ENSMUSG00000022283 125.27 1301.49 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
89. Rnf2 ENSMUSG00000026484 125.27 1301.49 ring finger protein 2 [Source:MGI Symbol;Acc:MGI:1101759]
90. Rpl18a ENSMUSG00000045128 125.27 1301.49 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
91. Rpl3-ps1 ENSMUSG00000084349 125.27 1301.49 ribosomal protein L3, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644217]
92. Rpl41 ENSMUSG00000093674 125.27 1301.49 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
93. Rps10-ps1 ENSMUSG00000060438 125.27 1301.49 ribosomal protein S10, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644167]
94. Rps4x ENSMUSG00000031320 125.27 1301.49 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
95. Rps5 ENSMUSG00000012848 125.27 1301.49 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
96. Sc4mol Sc4mol 125.27 1301.49
97. Sin3a ENSMUSG00000042557 125.27 1301.49 transcriptional regulator, SIN3A (yeast) [Source:MGI Symbol;Acc:MGI:107157]
98. Slc25a39 ENSMUSG00000018677 125.27 1301.49 solute carrier family 25, member 39 [Source:MGI Symbol;Acc:MGI:1196386]
99. Slc25a5 ENSMUSG00000016319 125.27 1301.49 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
100. Srrm2 ENSMUSG00000039218 125.27 1301.49 serine/arginine repetitive matrix 2 [Source:MGI Symbol;Acc:MGI:1923206]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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