Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_2, section s1.

Sample reads: 96,244. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3440.12 35743.83 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2752.10 28595.11 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Co1 ENSMUSG00000064351 2216.97 23034.96 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
4. Hbb-y ENSMUSG00000052187 2064.07 21446.28 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
5. Ptma ENSMUSG00000026238 1911.18 19857.71 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
6. mt-Co2 ENSMUSG00000064354 1834.73 19063.37 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Nd1 ENSMUSG00000064341 1834.73 19063.37 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
8. mt-Nd4 ENSMUSG00000064363 1834.73 19063.37 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. Hba-a1 ENSMUSG00000069919 1758.28 18269.03 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
10. Hbb-bh1 ENSMUSG00000052217 1376.05 14297.55 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
11. Hba-x ENSMUSG00000055609 1223.15 12708.88 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
12. mt-Nd2 ENSMUSG00000064345 993.81 10325.97 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
13. Hba-a2 ENSMUSG00000069917 917.37 9531.74 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
14. mt-Rnr2 ENSMUSG00000064339 688.02 7148.73 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
15. Actb ENSMUSG00000029580 611.58 6354.49 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
16. Eef1a1 ENSMUSG00000037742 611.58 6354.49 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. mt-Co3 ENSMUSG00000064358 573.35 5957.27 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. H19 ENSMUSG00000000031 382.24 3971.58 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
19. Mdk ENSMUSG00000027239 382.24 3971.58 midkine [Source:MGI Symbol;Acc:MGI:96949]
20. Chchd2 ENSMUSG00000070493 344.01 3574.36 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
21. Rpl4 ENSMUSG00000032399 344.01 3574.36 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
22. Hnrnpc ENSMUSG00000060373 305.79 3177.25 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
23. Hsp90ab1 ENSMUSG00000023944 305.79 3177.25 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
24. Tuba1b ENSMUSG00000023004 305.79 3177.25 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
25. mt-Nd3 ENSMUSG00000064360 305.79 3177.25 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
26. mt-Nd5 ENSMUSG00000064367 305.79 3177.25 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
27. Marcksl1 ENSMUSG00000047945 267.56 2780.03 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
28. Rpsa ENSMUSG00000032518 267.56 2780.03 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
29. Ywhae ENSMUSG00000020849 267.56 2780.03 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
30. Gm10800 ENSMUSG00000075014 229.34 2382.91 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
31. Gm13340 ENSMUSG00000083563 229.34 2382.91 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
32. Pkm ENSMUSG00000032294 229.34 2382.91 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
33. Rpl39-ps ENSMUSG00000036305 229.34 2382.91 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
34. Rplp1 ENSMUSG00000007892 229.34 2382.91 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
35. Trp53i11 ENSMUSG00000068735 229.34 2382.91 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
36. Ddx5 ENSMUSG00000020719 191.12 1985.79 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
37. Gm14303 ENSMUSG00000081344 191.12 1985.79 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
38. Grb10 ENSMUSG00000020176 191.12 1985.79 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
39. Hnrnpk ENSMUSG00000021546 191.12 1985.79 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
40. Lamp1 ENSMUSG00000031447 191.12 1985.79 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
41. Ran ENSMUSG00000029430 191.12 1985.79 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
42. Rnd2 ENSMUSG00000001313 191.12 1985.79 Rho family GTPase 2 [Source:MGI Symbol;Acc:MGI:1338755]
43. Rpl18a ENSMUSG00000045128 191.12 1985.79 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
44. Zic1 ENSMUSG00000032368 191.12 1985.79 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
45. Basp1 ENSMUSG00000045763 152.89 1588.57 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
46. Cfl1 ENSMUSG00000056201 152.89 1588.57 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
47. Hnrnpa2b1 ENSMUSG00000004980 152.89 1588.57 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
48. Hnrnpdl ENSMUSG00000029328 152.89 1588.57 heterogeneous nuclear ribonucleoprotein D-like [Source:MGI Symbol;Acc:MGI:1355299]
49. Hsp90aa1 ENSMUSG00000021270 152.89 1588.57 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
50. Klhdc2 ENSMUSG00000020978 152.89 1588.57 kelch domain containing 2 [Source:MGI Symbol;Acc:MGI:1916804]
51. Myl6 ENSMUSG00000090841 152.89 1588.57 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
52. Nedd4 ENSMUSG00000032216 152.89 1588.57 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
53. Ngfrap1 152.89 1588.57 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
54. Npm1 ENSMUSG00000057113 152.89 1588.57 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
55. Paics ENSMUSG00000029247 152.89 1588.57 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
56. Pcbp1 ENSMUSG00000051695 152.89 1588.57 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
57. Pdia6 ENSMUSG00000020571 152.89 1588.57 protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
58. Peg3 ENSMUSG00000002265 152.89 1588.57 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
59. Rpl21 ENSMUSG00000041453 152.89 1588.57 ribosomal protein L21 [Source:MGI Symbol;Acc:MGI:1278340]
60. Rpl23 ENSMUSG00000071415 152.89 1588.57 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
61. Rps20 ENSMUSG00000028234 152.89 1588.57 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
62. Set ENSMUSG00000054766 152.89 1588.57 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
63. Stmn1 ENSMUSG00000028832 152.89 1588.57 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
64. Tpt1 ENSMUSG00000060126 152.89 1588.57 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
65. Tubb2b ENSMUSG00000045136 152.89 1588.57 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
66. Txn1 ENSMUSG00000028367 152.89 1588.57 thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
67. Vcp ENSMUSG00000028452 152.89 1588.57 valosin containing protein [Source:MGI Symbol;Acc:MGI:99919]
68. Anp32b ENSMUSG00000028333 114.67 1191.45 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
69. Arl1 ENSMUSG00000060904 114.67 1191.45 ADP-ribosylation factor-like 1 [Source:MGI Symbol;Acc:MGI:99436]
70. Atp5g3 ENSMUSG00000018770 114.67 1191.45 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
71. Brd4 ENSMUSG00000024002 114.67 1191.45 bromodomain containing 4 [Source:MGI Symbol;Acc:MGI:1888520]
72. Ckb ENSMUSG00000001270 114.67 1191.45 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
73. Cnbp ENSMUSG00000030057 114.67 1191.45 cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]
74. Col18a1 ENSMUSG00000001435 114.67 1191.45 collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]
75. Ddx17 ENSMUSG00000055065 114.67 1191.45 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]
76. Dynll2 ENSMUSG00000020483 114.67 1191.45 dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
77. Eef2 ENSMUSG00000034994 114.67 1191.45 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
78. Eif3a ENSMUSG00000024991 114.67 1191.45 eukaryotic translation initiation factor 3, subunit A [Source:MGI Symbol;Acc:MGI:95301]
79. Eif5a ENSMUSG00000078812 114.67 1191.45 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
80. Elavl1 ENSMUSG00000040028 114.67 1191.45 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Source:MGI Symbol;Acc:MGI:1100851]
81. Erdr1 114.67 1191.45 erythroid differentiation regulator 1, transcript variant 1, non-coding
82. Fbxo8 ENSMUSG00000038206 114.67 1191.45 F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
83. Gm10076 ENSMUSG00000060143 114.67 1191.45 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
84. Gm13341 ENSMUSG00000083863 114.67 1191.45 predicted gene 13341 [Source:MGI Symbol;Acc:MGI:3650228]
85. Gnai2 ENSMUSG00000032562 114.67 1191.45 guanine nucleotide binding protein (G protein), alpha inhibiting 2 [Source:MGI Symbol;Acc:MGI:95772]
86. Heatr1 ENSMUSG00000050244 114.67 1191.45 HEAT repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442524]
87. Hmgn1 ENSMUSG00000040681 114.67 1191.45 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
88. Hnrnph1 ENSMUSG00000007850 114.67 1191.45 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
89. Hnrnpm ENSMUSG00000059208 114.67 1191.45 heterogeneous nuclear ribonucleoprotein M [Source:MGI Symbol;Acc:MGI:1926465]
90. Hspa5 ENSMUSG00000026864 114.67 1191.45 heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
91. Larp1 ENSMUSG00000037331 114.67 1191.45 La ribonucleoprotein domain family, member 1 [Source:MGI Symbol;Acc:MGI:1890165]
92. Lrpprc ENSMUSG00000024120 114.67 1191.45 leucine-rich PPR-motif containing [Source:MGI Symbol;Acc:MGI:1919666]
93. Med28 ENSMUSG00000015804 114.67 1191.45 mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
94. Mia3 ENSMUSG00000056050 114.67 1191.45 melanoma inhibitory activity 3 [Source:MGI Symbol;Acc:MGI:2443183]
95. Mlf2 ENSMUSG00000030120 114.67 1191.45 myeloid leukemia factor 2 [Source:MGI Symbol;Acc:MGI:1353554]
96. Naa15 ENSMUSG00000063273 114.67 1191.45 N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:MGI Symbol;Acc:MGI:1922088]
97. Ndufa12 ENSMUSG00000020022 114.67 1191.45 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
98. Oaz1 ENSMUSG00000035242 114.67 1191.45 ornithine decarboxylase antizyme 1 [Source:MGI Symbol;Acc:MGI:109433]
99. Ppme1 ENSMUSG00000030718 114.67 1191.45 protein phosphatase methylesterase 1 [Source:MGI Symbol;Acc:MGI:1919840]
100. Pum1 ENSMUSG00000028580, ENSMUSG00000106966 114.67 1191.45 pumilio RNA-binding family member 1 [Source:MGI Symbol;Acc:MGI:1931749]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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