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Experiment Mouse_E11_5_slice_1, section s9.

Sample reads: 96,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 4923.46 51157.81 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 4219.15 43839.59 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Cytb ENSMUSG00000064370 3685.27 38292.25 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 2196.62 22824.25 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 2174.63 22595.76 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 1726.27 17937.02 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 1512.47 15715.50 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 999.35 10383.87 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 981.64 10199.85 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd5 ENSMUSG00000064367 755.01 7845.02 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. Hbb-y ENSMUSG00000052187 639.56 6645.43 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
12. mt-Nd3 ENSMUSG00000064360 511.28 5312.52 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. mt-Co3 ENSMUSG00000064358 495.40 5147.51 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. Eef1a1 ENSMUSG00000037742 489.90 5090.37 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Actb ENSMUSG00000029580 436.15 4531.87 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
16. Gm13340 ENSMUSG00000083563 392.17 4074.89 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
17. mt-Rnr1 ENSMUSG00000064337 386.06 4011.40 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
18. Hba-a1 ENSMUSG00000069919 357.35 3713.09 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
19. Hba-x ENSMUSG00000055609 334.14 3471.92 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
20. Rpsa ENSMUSG00000032518 326.19 3389.32 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. Tuba1b ENSMUSG00000023004 307.87 3198.96 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. Mdk ENSMUSG00000027239 306.04 3179.95 midkine [Source:MGI Symbol;Acc:MGI:96949]
23. Gm10800 ENSMUSG00000075014 300.54 3122.80 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
24. H19 ENSMUSG00000000031 292.60 3040.30 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
25. Npm1 ENSMUSG00000057113 279.16 2900.65 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
26. Set ENSMUSG00000054766 240.68 2500.81 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
27. Hbb-bh1 ENSMUSG00000052217 230.90 2399.19 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
28. Eif4g2 ENSMUSG00000005610 223.57 2323.03 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
29. Tuba1a ENSMUSG00000072235 216.85 2253.21 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
30. Rpl18a ENSMUSG00000045128 211.35 2196.06 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
31. Tubb5 ENSMUSG00000001525 211.35 2196.06 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
32. Tmsb4x ENSMUSG00000049775 208.30 2164.37 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
33. Hnrnpc ENSMUSG00000060373 204.02 2119.89 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
34. Ubb ENSMUSG00000019505 204.02 2119.89 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
35. Nedd4 ENSMUSG00000032216 195.47 2031.05 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
36. Rrm2 ENSMUSG00000020649 193.03 2005.70 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
37. Pkm ENSMUSG00000032294 192.42 1999.36 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
38. Tubb2b ENSMUSG00000045136 191.81 1993.03 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
39. Hsp90aa1 ENSMUSG00000021270 180.81 1878.73 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
40. Hba-a2 ENSMUSG00000069917 175.31 1821.58 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
41. Rpl4 ENSMUSG00000032399 171.04 1777.21 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Cfl1 ENSMUSG00000056201 170.43 1770.87 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
43. U2af2 ENSMUSG00000030435 165.54 1720.06 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
44. Ybx1 ENSMUSG00000028639 165.54 1720.06 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
45. Paics ENSMUSG00000029247 161.26 1675.59 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
46. Banf1 ENSMUSG00000024844 159.43 1656.58 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
47. Eif5a ENSMUSG00000078812 156.38 1624.89 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
48. Tpt1 ENSMUSG00000060126 156.38 1624.89 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
49. Hmga2 ENSMUSG00000056758 139.27 1447.10 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
50. Hsp90ab1 ENSMUSG00000023944 137.44 1428.09 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
51. Atp5g3 ENSMUSG00000018770 136.83 1421.75 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
52. Rpl23 ENSMUSG00000071415 134.39 1396.40 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
53. Malat1 ENSMUSG00000092341 131.94 1370.94 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
54. Eef1b2 ENSMUSG00000025967 128.28 1332.91 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
55. Cadm1 ENSMUSG00000032076 127.06 1320.23 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
56. Fkbp1a ENSMUSG00000032966 127.06 1320.23 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
57. Myl6 ENSMUSG00000090841 124.00 1288.44 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
58. Cox8a ENSMUSG00000035885 122.78 1275.76 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
59. Grb10 ENSMUSG00000020176 121.56 1263.08 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
60. Rps20 ENSMUSG00000028234 119.73 1244.07 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
61. Map1b ENSMUSG00000052727 115.45 1199.60 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
62. Rps5 ENSMUSG00000012848 113.62 1180.58 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
63. Top2a ENSMUSG00000020914 113.62 1180.58 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
64. Igf2 ENSMUSG00000048583 112.40 1167.91 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
65. Rps26 ENSMUSG00000025362 111.79 1161.57 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
66. Ldha ENSMUSG00000063229 110.56 1148.79 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
67. Stmn1 ENSMUSG00000028832 109.95 1142.45 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
68. Cd24a ENSMUSG00000047139 107.51 1117.10 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
69. Rps4x ENSMUSG00000031320 107.51 1117.10 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
70. Trim28 ENSMUSG00000005566 107.51 1117.10 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
71. Ywhab ENSMUSG00000018326 106.90 1110.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
72. Gm17132 ENSMUSG00000061331 105.68 1098.08 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
73. Ran ENSMUSG00000029430 104.46 1085.40 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
74. Chchd2 ENSMUSG00000070493 103.23 1072.62 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
75. Pabpc1 ENSMUSG00000022283 102.01 1059.95 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
76. Sub1 ENSMUSG00000022205 101.40 1053.61 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
77. Tubb3 ENSMUSG00000062380 96.51 1002.80 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
78. Lamp1 ENSMUSG00000031447 95.90 996.46 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
79. Hnrnpa2b1 ENSMUSG00000004980 95.29 990.12 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
80. Ndufa12 ENSMUSG00000020022 95.29 990.12 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
81. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 95.29 990.12 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
82. Trp53i11 ENSMUSG00000068735 94.68 983.78 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
83. Pbx1 ENSMUSG00000052534 92.85 964.77 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
84. Gm5805 ENSMUSG00000061848 91.02 945.75 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
85. Sox2 ENSMUSG00000074637 91.02 945.75 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
86. Rplp1 ENSMUSG00000007892 89.80 933.08 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
87. 2810417H13Rik 89.18 926.64 RIKEN cDNA 2810417H13 gene
88. Gm14303 ENSMUSG00000081344 87.96 913.96 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
89. Morf4l1 ENSMUSG00000062270 87.35 907.62 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
90. Marcks ENSMUSG00000069662 85.52 888.61 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
91. Pcbp1 ENSMUSG00000051695 85.52 888.61 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
92. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 84.91 882.27 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
93. Hoxc8 ENSMUSG00000001657 84.91 882.27 homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
94. Kpnb1 ENSMUSG00000001440 84.30 875.93 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
95. Rpl32 ENSMUSG00000057841 83.69 869.59 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
96. Basp1 ENSMUSG00000045763 82.46 856.81 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
97. Rpl37 ENSMUSG00000041841 82.46 856.81 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
98. Rps3a1 ENSMUSG00000028081 82.46 856.81 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
99. Serbp1 ENSMUSG00000036371 80.02 831.46 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
100. Eef2 ENSMUSG00000034994 79.41 825.12 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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