Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_1, section s83.

Sample reads: 96,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4153.80 43160.98 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3314.49 34439.95 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd4 ENSMUSG00000064363 2087.20 21687.52 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Co2 ENSMUSG00000064354 1954.17 20305.24 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Rnr2 ENSMUSG00000064339 1821.15 18923.06 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Atp6 ENSMUSG00000064357 1817.98 18890.13 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Nd1 ENSMUSG00000064341 1746.72 18149.68 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
8. mt-Nd2 ENSMUSG00000064345 1034.10 10745.05 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 942.25 9790.66 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd5 ENSMUSG00000064367 756.96 7865.36 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. Actb ENSMUSG00000029580 628.69 6532.54 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. H19 ENSMUSG00000000031 620.77 6450.25 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. mt-Nd3 ENSMUSG00000064360 614.44 6384.48 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. Eef1a1 ENSMUSG00000037742 452.91 4706.06 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Hba-a1 ENSMUSG00000069919 451.33 4689.64 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
16. Npm1 ENSMUSG00000057113 437.08 4541.58 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
17. mt-Co3 ENSMUSG00000064358 402.24 4179.56 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Rpsa ENSMUSG00000032518 386.40 4014.98 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Afp ENSMUSG00000054932 340.48 3537.83 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
20. Gm13340 ENSMUSG00000083563 323.06 3356.83 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
21. Hbb-y ENSMUSG00000052187 289.80 3011.23 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
22. Eif5a ENSMUSG00000078812 288.22 2994.81 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
23. Hsp90ab1 ENSMUSG00000023944 281.88 2928.94 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
24. Rpl4 ENSMUSG00000032399 278.71 2896.00 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
25. Tuba1b ENSMUSG00000023004 272.38 2830.22 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Banf1 ENSMUSG00000024844 256.54 2665.64 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
27. Pkm ENSMUSG00000032294 250.21 2599.86 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
28. Igf2 ENSMUSG00000048583 240.71 2501.15 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
29. Hbb-bt ENSMUSG00000073940 234.37 2435.27 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
30. Hba-x ENSMUSG00000055609 216.95 2254.27 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
31. Cfl1 ENSMUSG00000056201 215.37 2237.85 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
32. Hsp90aa1 ENSMUSG00000021270 213.79 2221.43 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
33. mt-Rnr1 ENSMUSG00000064337 210.62 2188.49 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
34. Hnrnpc ENSMUSG00000060373 209.04 2172.08 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
35. Eef1b2 ENSMUSG00000025967 202.70 2106.20 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
36. Ldha ENSMUSG00000063229 201.12 2089.78 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
37. Atp5g3 ENSMUSG00000018770 194.78 2023.90 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
38. Ppbp ENSMUSG00000029372 190.03 1974.55 pro-platelet basic protein [Source:MGI Symbol;Acc:MGI:1888712]
39. Mdk ENSMUSG00000027239 186.87 1941.71 midkine [Source:MGI Symbol;Acc:MGI:96949]
40. Pabpc1 ENSMUSG00000022283 183.70 1908.78 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
41. Myl6 ENSMUSG00000090841 182.11 1892.25 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
42. Ybx1 ENSMUSG00000028639 182.11 1892.25 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
43. Gm10800 ENSMUSG00000075014 180.53 1875.84 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
44. Set ENSMUSG00000054766 180.53 1875.84 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
45. Ubb ENSMUSG00000019505 177.36 1842.90 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
46. Pf4 ENSMUSG00000029373 175.78 1826.48 platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
47. Psat1 ENSMUSG00000024640 174.20 1810.06 phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
48. Tubb5 ENSMUSG00000001525 172.61 1793.54 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
49. Eif4g2 ENSMUSG00000005610 171.03 1777.13 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
50. Hbb-bh1 ENSMUSG00000052217 169.45 1760.71 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
51. Rps20 ENSMUSG00000028234 169.45 1760.71 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
52. Rpl23 ENSMUSG00000071415 159.94 1661.89 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
53. Rplp1 ENSMUSG00000007892 159.94 1661.89 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
54. Anp32b ENSMUSG00000028333 156.78 1629.06 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
55. Cox8a ENSMUSG00000035885 156.78 1629.06 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
56. Lamp1 ENSMUSG00000031447 148.86 1546.76 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
57. Rpl18a ENSMUSG00000045128 147.28 1530.35 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
58. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 145.69 1513.82 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
59. Paics ENSMUSG00000029247 144.11 1497.41 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
60. Nedd4 ENSMUSG00000032216 142.52 1480.89 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
61. Ran ENSMUSG00000029430 140.94 1464.47 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
62. Rps26 ENSMUSG00000025362 140.94 1464.47 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
63. Fkbp1a ENSMUSG00000032966 137.77 1431.53 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
64. Pcbp1 ENSMUSG00000051695 137.77 1431.53 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
65. Chchd2 ENSMUSG00000070493 134.61 1398.70 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
66. Hba-a2 ENSMUSG00000069917 134.61 1398.70 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
67. Shmt2 ENSMUSG00000025403 131.44 1365.76 serine hydroxymethyltransferase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1277989]
68. Ybx3 ENSMUSG00000030189 129.86 1349.34 Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]
69. C1qbp ENSMUSG00000018446 126.69 1316.40 complement component 1, q subcomponent binding protein [Source:MGI Symbol;Acc:MGI:1194505]
70. Tpt1 ENSMUSG00000060126 126.69 1316.40 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
71. Rrm2 ENSMUSG00000020649 125.11 1299.98 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
72. Grb10 ENSMUSG00000020176 123.52 1283.46 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
73. Hspe1 ENSMUSG00000073676 123.52 1283.46 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
74. Ywhab ENSMUSG00000018326 123.52 1283.46 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
75. Ndufa12 ENSMUSG00000020022 121.94 1267.04 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
76. Apoe ENSMUSG00000002985 120.35 1250.52 apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
77. Eef2 ENSMUSG00000034994 120.35 1250.52 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
78. Rps4x ENSMUSG00000031320 120.35 1250.52 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
79. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 120.35 1250.52 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
80. Hbb-bs ENSMUSG00000052305 118.77 1234.11 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
81. Gm5805 ENSMUSG00000061848 115.60 1201.17 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
82. Hdgf ENSMUSG00000004897 110.85 1151.81 hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
83. Ago2 ENSMUSG00000036698 106.10 1102.46 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
84. Rps5 ENSMUSG00000012848 106.10 1102.46 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
85. Arpc2 ENSMUSG00000006304 102.93 1069.52 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
86. Sub1 ENSMUSG00000022205 101.35 1053.10 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
87. Rpl37 ENSMUSG00000041841 99.77 1036.68 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
88. Fkbp4 ENSMUSG00000030357 98.18 1020.16 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
89. Rpl8 ENSMUSG00000003970 95.02 987.33 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
90. Tmsb4x ENSMUSG00000049775 95.02 987.33 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
91. Cdc42 ENSMUSG00000006699 90.27 937.97 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
92. Hnrnpa2b1 ENSMUSG00000004980 90.27 937.97 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
93. Ngfrap1 90.27 937.97 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
94. U2af2 ENSMUSG00000030435 90.27 937.97 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
95. Fth1 ENSMUSG00000024661 88.68 921.45 ferritin heavy polypeptide 1 [Source:MGI Symbol;Acc:MGI:95588]
96. Gm14303 ENSMUSG00000081344 87.10 905.03 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
97. Hmga2 ENSMUSG00000056758 87.10 905.03 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
98. Serbp1 ENSMUSG00000036371 87.10 905.03 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
99. Kpnb1 ENSMUSG00000001440 85.51 888.51 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
100. Pfn1 ENSMUSG00000018293 83.93 872.09 profilin 1 [Source:MGI Symbol;Acc:MGI:97549]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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