Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_1, section s82.

Sample reads: 96,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4121.20 42819.31 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 3608.34 37490.69 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Nd4 ENSMUSG00000064363 2260.51 23486.72 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Co2 ENSMUSG00000064354 2178.57 22635.37 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 2124.88 22077.53 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 1958.17 20345.41 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Rnr2 ENSMUSG00000064339 1829.60 19009.56 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
8. mt-Nd2 ENSMUSG00000064345 1068.09 11097.47 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 1035.60 10759.90 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd3 ENSMUSG00000064360 751.62 7809.34 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. H19 ENSMUSG00000000031 669.68 6957.98 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
12. Actb ENSMUSG00000029580 572.19 5945.06 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. Hba-a1 ENSMUSG00000069919 545.35 5666.19 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
14. mt-Co3 ENSMUSG00000064358 539.70 5607.49 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. mt-Nd5 ENSMUSG00000064367 539.70 5607.49 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
16. Eef1a1 ENSMUSG00000037742 497.31 5167.06 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. Npm1 ENSMUSG00000057113 497.31 5167.06 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
18. Hbb-y ENSMUSG00000052187 476.12 4946.89 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
19. Gm10800 ENSMUSG00000075014 405.48 4212.94 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
20. Gm13340 ENSMUSG00000083563 389.94 4051.48 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
21. Rpsa ENSMUSG00000032518 388.53 4036.83 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Afp ENSMUSG00000054932 291.04 3023.91 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
23. Rpl4 ENSMUSG00000032399 291.04 3023.91 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
24. Pkm ENSMUSG00000032294 289.63 3009.26 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
25. Tuba1b ENSMUSG00000023004 276.91 2877.10 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Ldha ENSMUSG00000063229 268.44 2789.09 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
27. Eif5a ENSMUSG00000078812 248.66 2583.58 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
28. Hba-a2 ENSMUSG00000069917 247.24 2568.83 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
29. Hba-x ENSMUSG00000055609 241.59 2510.12 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
30. Hsp90aa1 ENSMUSG00000021270 238.77 2480.82 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
31. Rpl18a ENSMUSG00000045128 235.94 2451.42 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
32. Banf1 ENSMUSG00000024844 224.64 2334.01 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
33. Rpl23 ENSMUSG00000071415 224.64 2334.01 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
34. Eef1b2 ENSMUSG00000025967 221.81 2304.61 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
35. Hbb-bh1 ENSMUSG00000052217 213.34 2216.60 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
36. Ubb ENSMUSG00000019505 213.34 2216.60 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
37. Hnrnpc ENSMUSG00000060373 207.68 2157.80 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
38. Hsp90ab1 ENSMUSG00000023944 203.45 2113.85 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
39. Lamp1 ENSMUSG00000031447 199.21 2069.79 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
40. Mdk ENSMUSG00000027239 199.21 2069.79 midkine [Source:MGI Symbol;Acc:MGI:96949]
41. Igf2 ENSMUSG00000048583 197.79 2055.04 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
42. Rplp1 ENSMUSG00000007892 192.14 1996.34 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
43. Pf4 ENSMUSG00000029373 189.32 1967.04 platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
44. Tubb5 ENSMUSG00000001525 189.32 1967.04 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
45. Cfl1 ENSMUSG00000056201 186.49 1937.63 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
46. Paics ENSMUSG00000029247 185.08 1922.98 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
47. Rps20 ENSMUSG00000028234 182.25 1893.58 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
48. Myl6 ENSMUSG00000090841 180.84 1878.93 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
49. Chchd2 ENSMUSG00000070493 179.43 1864.28 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
50. Tpt1 ENSMUSG00000060126 179.43 1864.28 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
51. mt-Rnr1 ENSMUSG00000064337 179.43 1864.28 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
52. Hbb-bt ENSMUSG00000073940 172.36 1790.82 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
53. Psat1 ENSMUSG00000024640 172.36 1790.82 phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
54. Atp5g3 ENSMUSG00000018770 168.13 1746.87 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
55. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 163.89 1702.82 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
56. Set ENSMUSG00000054766 163.89 1702.82 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
57. Eif4g2 ENSMUSG00000005610 161.06 1673.42 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
58. Ppbp ENSMUSG00000029372 158.24 1644.12 pro-platelet basic protein [Source:MGI Symbol;Acc:MGI:1888712]
59. Ran ENSMUSG00000029430 156.82 1629.36 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
60. Rps5 ENSMUSG00000012848 156.82 1629.36 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
61. Rps4x ENSMUSG00000031320 155.41 1614.71 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
62. Ybx1 ENSMUSG00000028639 154.00 1600.06 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
63. U2af2 ENSMUSG00000030435 149.76 1556.01 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
64. Hbb-bs ENSMUSG00000052305 142.69 1482.55 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
65. Rpl37 ENSMUSG00000041841 141.28 1467.90 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
66. Rps26 ENSMUSG00000025362 138.46 1438.60 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
67. Hmga2 ENSMUSG00000056758 134.22 1394.55 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
68. Gm5805 ENSMUSG00000061848 132.81 1379.90 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
69. Anp32b ENSMUSG00000028333 129.98 1350.49 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
70. Rps3a1 ENSMUSG00000028081 129.98 1350.49 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
71. Cox8a ENSMUSG00000035885 128.57 1335.84 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
72. Apoe ENSMUSG00000002985 122.92 1277.14 apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
73. Hspe1 ENSMUSG00000073676 122.92 1277.14 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
74. Nedd4 ENSMUSG00000032216 122.92 1277.14 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
75. Tmsb4x ENSMUSG00000049775 117.26 1218.33 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
76. Ndufa12 ENSMUSG00000020022 115.85 1203.68 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
77. Pcbp1 ENSMUSG00000051695 113.03 1174.38 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
78. Gm14303 ENSMUSG00000081344 111.61 1159.63 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
79. Grb10 ENSMUSG00000020176 111.61 1159.63 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
80. Sub1 ENSMUSG00000022205 111.61 1159.63 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
81. Rpl32 ENSMUSG00000057841 108.79 1130.33 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
82. Gnb2l1 Gnb2l1 107.37 1115.58
83. Arpc2 ENSMUSG00000006304 104.55 1086.28 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
84. Fkbp1a ENSMUSG00000032966 103.14 1071.63 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
85. Ngfrap1 103.14 1071.63 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
86. Hdgf ENSMUSG00000004897 101.72 1056.87 hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
87. Rpl14-ps1 ENSMUSG00000046721 101.72 1056.87 ribosomal protein L14, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3710579]
88. Rpl8 ENSMUSG00000003970 100.31 1042.22 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
89. Pabpc1 ENSMUSG00000022283 98.90 1027.57 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
90. Cks2 ENSMUSG00000062248 97.48 1012.82 CDC28 protein kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1913447]
91. Slc25a5 ENSMUSG00000016319 97.48 1012.82 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
92. Eef2 ENSMUSG00000034994 96.07 998.17 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
93. Fkbp4 ENSMUSG00000030357 96.07 998.17 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
94. Gm17132 ENSMUSG00000061331 94.66 983.52 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
95. Ywhab ENSMUSG00000018326 91.83 954.11 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
96. Hnrnpa2b1 ENSMUSG00000004980 89.01 924.81 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
97. Rps8 ENSMUSG00000047675 89.01 924.81 ribosomal protein S8 [Source:MGI Symbol;Acc:MGI:98166]
98. Ago2 ENSMUSG00000036698 87.59 910.06 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
99. Prdx1 ENSMUSG00000028691 84.77 880.76 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
100. Rrm2 ENSMUSG00000020649 84.77 880.76 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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