Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_1, section s81.

Sample reads: 96,252. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3858.28 40085.30 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3595.81 37358.39 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Rnr2 ENSMUSG00000064339 2633.43 27359.82 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. mt-Nd4 ENSMUSG00000064363 2021.00 20997.02 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 1942.26 20178.96 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 1872.27 19451.80 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 1732.29 17997.49 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 1058.62 10998.45 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. H19 ENSMUSG00000000031 822.40 8544.26 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. Actb ENSMUSG00000029580 761.16 7908.01 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd2 ENSMUSG00000064345 752.41 7817.11 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Nd3 ENSMUSG00000064360 664.92 6908.13 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. Hba-a1 ENSMUSG00000069919 568.68 5908.26 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
14. mt-Nd5 ENSMUSG00000064367 551.18 5726.44 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
15. Hbb-y ENSMUSG00000052187 507.44 5272.01 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
16. Npm1 ENSMUSG00000057113 454.94 4726.56 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
17. mt-Co3 ENSMUSG00000064358 454.94 4726.56 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Eef1a1 ENSMUSG00000037742 428.70 4453.95 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
19. Rpsa ENSMUSG00000032518 376.20 3908.50 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Tuba1b ENSMUSG00000023004 341.21 3544.97 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
21. Afp ENSMUSG00000054932 332.46 3454.07 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
22. Gm13340 ENSMUSG00000083563 314.96 3272.25 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
23. Mdk ENSMUSG00000027239 306.21 3181.35 midkine [Source:MGI Symbol;Acc:MGI:96949]
24. mt-Rnr1 ENSMUSG00000064337 306.21 3181.35 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
25. Hbb-bh1 ENSMUSG00000052217 288.71 2999.53 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
26. Rpl18a ENSMUSG00000045128 279.97 2908.73 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
27. Tubb5 ENSMUSG00000001525 271.22 2817.82 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
28. Eif5a ENSMUSG00000078812 262.47 2726.91 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
29. Igf2 ENSMUSG00000048583 253.72 2636.00 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
30. Tpt1 ENSMUSG00000060126 253.72 2636.00 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
31. Banf1 ENSMUSG00000024844 236.22 2454.19 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
32. Cfl1 ENSMUSG00000056201 236.22 2454.19 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
33. Pkm ENSMUSG00000032294 227.47 2363.28 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
34. Hbb-bt ENSMUSG00000073940 218.72 2272.37 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
35. Hsp90aa1 ENSMUSG00000021270 218.72 2272.37 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
36. Rps20 ENSMUSG00000028234 218.72 2272.37 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
37. Hba-a2 ENSMUSG00000069917 209.97 2181.47 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
38. Hsp90ab1 ENSMUSG00000023944 209.97 2181.47 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
39. Rpl4 ENSMUSG00000032399 209.97 2181.47 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
40. Gm10800 ENSMUSG00000075014 201.23 2090.66 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
41. Ubb ENSMUSG00000019505 201.23 2090.66 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
42. Cox8a ENSMUSG00000035885 183.73 1908.85 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
43. Lamp1 ENSMUSG00000031447 174.98 1817.94 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
44. Pcbp1 ENSMUSG00000051695 174.98 1817.94 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
45. Ago2 ENSMUSG00000036698 166.23 1727.03 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
46. Hnrnpc ENSMUSG00000060373 166.23 1727.03 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
47. Ldha ENSMUSG00000063229 166.23 1727.03 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
48. Rrm2 ENSMUSG00000020649 166.23 1727.03 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
49. Anp32b ENSMUSG00000028333 157.48 1636.13 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
50. Apoe ENSMUSG00000002985 157.48 1636.13 apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
51. Myl6 ENSMUSG00000090841 157.48 1636.13 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
52. Paics ENSMUSG00000029247 157.48 1636.13 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
53. Eef1b2 ENSMUSG00000025967 148.73 1545.22 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
54. Hbb-bs ENSMUSG00000052305 148.73 1545.22 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
55. Rps26 ENSMUSG00000025362 148.73 1545.22 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
56. Rps3a1 ENSMUSG00000028081 148.73 1545.22 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
57. Set ENSMUSG00000054766 148.73 1545.22 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
58. Eef2 ENSMUSG00000034994 139.98 1454.31 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
59. Eif4g2 ENSMUSG00000005610 139.98 1454.31 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
60. Grb10 ENSMUSG00000020176 139.98 1454.31 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
61. Nedd4 ENSMUSG00000032216 139.98 1454.31 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
62. Pabpc1 ENSMUSG00000022283 139.98 1454.31 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
63. Ttr ENSMUSG00000061808 139.98 1454.31 transthyretin [Source:MGI Symbol;Acc:MGI:98865]
64. Atp5g3 ENSMUSG00000018770 131.23 1363.40 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
65. Hmga2 ENSMUSG00000056758 131.23 1363.40 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
66. Rpl23 ENSMUSG00000071415 131.23 1363.40 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
67. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 122.48 1272.50 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
68. Chchd2 ENSMUSG00000070493 122.48 1272.50 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
69. Hdgf ENSMUSG00000004897 122.48 1272.50 hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
70. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 122.48 1272.50 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
71. C1qbp ENSMUSG00000018446 113.74 1181.69 complement component 1, q subcomponent binding protein [Source:MGI Symbol;Acc:MGI:1194505]
72. Eif4h ENSMUSG00000040731 113.74 1181.69 eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
73. Ndufa12 ENSMUSG00000020022 113.74 1181.69 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
74. Pfn1 ENSMUSG00000018293 113.74 1181.69 profilin 1 [Source:MGI Symbol;Acc:MGI:97549]
75. Ran ENSMUSG00000029430 113.74 1181.69 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
76. Rps15 ENSMUSG00000063457 113.74 1181.69 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
77. Rps5 ENSMUSG00000012848 113.74 1181.69 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
78. Shmt2 ENSMUSG00000025403 113.74 1181.69 serine hydroxymethyltransferase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1277989]
79. Sp1 ENSMUSG00000001280 113.74 1181.69 trans-acting transcription factor 1 [Source:MGI Symbol;Acc:MGI:98372]
80. Ywhab ENSMUSG00000018326 113.74 1181.69 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
81. Ywhaz ENSMUSG00000022285 113.74 1181.69 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
82. Adprh ENSMUSG00000002844 104.99 1090.79 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
83. Elp2 ENSMUSG00000024271 104.99 1090.79 elongator acetyltransferase complex subunit 2 [Source:MGI Symbol;Acc:MGI:1889642]
84. Hba-x ENSMUSG00000055609 104.99 1090.79 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
85. Hspe1 ENSMUSG00000073676 104.99 1090.79 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
86. Mapre1 ENSMUSG00000027479 104.99 1090.79 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
87. Pf4 ENSMUSG00000029373 104.99 1090.79 platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
88. Serbp1 ENSMUSG00000036371 104.99 1090.79 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
89. Slc25a5 ENSMUSG00000016319 104.99 1090.79 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
90. Calr ENSMUSG00000003814 96.24 999.88 calreticulin [Source:MGI Symbol;Acc:MGI:88252]
91. Cycs ENSMUSG00000063694 96.24 999.88 cytochrome c, somatic [Source:MGI Symbol;Acc:MGI:88578]
92. Fkbp1a ENSMUSG00000032966 96.24 999.88 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
93. Gm14303 ENSMUSG00000081344 96.24 999.88 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
94. Gm14586 ENSMUSG00000083621 96.24 999.88 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
95. Malat1 ENSMUSG00000092341 96.24 999.88 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
96. Meg3 ENSMUSG00000021268 96.24 999.88 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
97. Psat1 ENSMUSG00000024640 96.24 999.88 phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
98. Rbp4 ENSMUSG00000024990 96.24 999.88 retinol binding protein 4, plasma [Source:MGI Symbol;Acc:MGI:97879]
99. Rplp1 ENSMUSG00000007892 96.24 999.88 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
100. Slc25a39 ENSMUSG00000018677 96.24 999.88 solute carrier family 25, member 39 [Source:MGI Symbol;Acc:MGI:1196386]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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