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Experiment Mouse_E11_5_slice_1, section s80.

Sample reads: 96,257. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4063.67 42217.47 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 3994.49 41498.76 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Nd4 ENSMUSG00000064363 2333.26 24240.24 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Co2 ENSMUSG00000064354 2294.63 23838.91 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 2165.25 22494.78 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 2153.58 22373.54 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Rnr2 ENSMUSG00000064339 1879.55 19526.65 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
8. mt-Nd2 ENSMUSG00000064345 1136.53 11807.41 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 1064.66 11060.75 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd3 ENSMUSG00000064360 860.71 8941.92 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. H19 ENSMUSG00000000031 700.79 7280.51 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
12. mt-Nd5 ENSMUSG00000064367 598.37 6216.47 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
13. mt-Co3 ENSMUSG00000064358 580.40 6029.78 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. Actb ENSMUSG00000029580 510.32 5301.71 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Eef1a1 ENSMUSG00000037742 499.54 5189.72 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Npm1 ENSMUSG00000057113 443.83 4610.95 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
17. Hba-a1 ENSMUSG00000069919 426.76 4433.61 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
18. Gm13340 ENSMUSG00000083563 391.72 4069.58 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Rpsa ENSMUSG00000032518 365.67 3798.95 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Mdk ENSMUSG00000027239 345.00 3584.21 midkine [Source:MGI Symbol;Acc:MGI:96949]
21. Afp ENSMUSG00000054932 341.41 3546.91 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
22. Hbb-y ENSMUSG00000052187 315.35 3276.17 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
23. Tuba1b ENSMUSG00000023004 291.10 3024.24 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
24. Rpl4 ENSMUSG00000032399 269.53 2800.15 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
25. Pkm ENSMUSG00000032294 243.48 2529.51 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
26. Eif5a ENSMUSG00000078812 230.00 2389.47 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
27. Banf1 ENSMUSG00000024844 227.31 2361.52 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
28. Hsp90aa1 ENSMUSG00000021270 223.71 2324.12 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
29. Cfl1 ENSMUSG00000056201 221.92 2305.53 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
30. mt-Rnr1 ENSMUSG00000064337 214.73 2230.83 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
31. Igf2 ENSMUSG00000048583 202.15 2100.14 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
32. Hsp90ab1 ENSMUSG00000023944 196.76 2044.14 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
33. Atp5g3 ENSMUSG00000018770 194.06 2016.09 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
34. Hbb-bt ENSMUSG00000073940 188.67 1960.09 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
35. Eef1b2 ENSMUSG00000025967 187.78 1950.85 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
36. Tpt1 ENSMUSG00000060126 187.78 1950.85 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
37. Rpl23 ENSMUSG00000071415 184.18 1913.45 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
38. Ldha ENSMUSG00000063229 183.28 1904.10 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
39. Hbb-bh1 ENSMUSG00000052217 181.49 1885.50 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
40. Pf4 ENSMUSG00000029373 179.69 1866.80 platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
41. Rps20 ENSMUSG00000028234 176.99 1838.75 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
42. Tubb5 ENSMUSG00000001525 176.10 1829.50 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
43. Ubb ENSMUSG00000019505 176.10 1829.50 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
44. Gm10800 ENSMUSG00000075014 174.30 1810.80 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
45. Paics ENSMUSG00000029247 169.81 1764.16 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
46. Rpl18a ENSMUSG00000045128 168.91 1754.81 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
47. Hnrnpc ENSMUSG00000060373 168.01 1745.46 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
48. Hba-x ENSMUSG00000055609 167.11 1736.11 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
49. Ttr ENSMUSG00000061808 161.72 1680.11 transthyretin [Source:MGI Symbol;Acc:MGI:98865]
50. Hba-a2 ENSMUSG00000069917 159.92 1661.41 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
51. Chchd2 ENSMUSG00000070493 158.13 1642.81 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
52. Psat1 ENSMUSG00000024640 157.23 1633.46 phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
53. Eif4g2 ENSMUSG00000005610 153.63 1596.06 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
54. Hbb-bs ENSMUSG00000052305 152.74 1586.82 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
55. Ybx1 ENSMUSG00000028639 152.74 1586.82 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
56. Ran ENSMUSG00000029430 146.45 1521.47 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
57. Cox8a ENSMUSG00000035885 145.55 1512.12 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
58. Set ENSMUSG00000054766 142.85 1484.07 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
59. Ndufa12 ENSMUSG00000020022 141.95 1474.72 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
60. Rplp1 ENSMUSG00000007892 141.95 1474.72 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
61. Apoe ENSMUSG00000002985 141.06 1465.47 apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
62. Pabpc1 ENSMUSG00000022283 138.36 1437.42 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
63. Rps26 ENSMUSG00000025362 138.36 1437.42 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
64. Rps5 ENSMUSG00000012848 137.46 1428.07 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
65. Nedd4 ENSMUSG00000032216 134.77 1400.13 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
66. Anp32b ENSMUSG00000028333 132.97 1381.43 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
67. Rps4x ENSMUSG00000031320 132.97 1381.43 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
68. Myl6 ENSMUSG00000090841 131.17 1362.73 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
69. Lamp1 ENSMUSG00000031447 130.27 1353.38 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
70. Grb10 ENSMUSG00000020176 129.38 1344.13 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
71. Gm14303 ENSMUSG00000081344 118.59 1232.03 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
72. Fkbp1a ENSMUSG00000032966 117.70 1222.79 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
73. Hspe1 ENSMUSG00000073676 116.80 1213.44 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
74. Sub1 ENSMUSG00000022205 115.90 1204.09 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
75. Rpl32 ENSMUSG00000057841 113.20 1176.03 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
76. Ppbp ENSMUSG00000029372 111.41 1157.44 pro-platelet basic protein [Source:MGI Symbol;Acc:MGI:1888712]
77. Rrm2 ENSMUSG00000020649 106.02 1101.44 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
78. Rpl37 ENSMUSG00000041841 105.12 1092.09 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
79. Ywhab ENSMUSG00000018326 104.22 1082.74 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
80. Eef2 ENSMUSG00000034994 103.32 1073.39 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
81. Pcbp1 ENSMUSG00000051695 103.32 1073.39 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
82. Gm5805 ENSMUSG00000061848 101.52 1054.69 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
83. Arpc2 ENSMUSG00000006304 100.63 1045.45 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
84. C1qbp ENSMUSG00000018446 100.63 1045.45 complement component 1, q subcomponent binding protein [Source:MGI Symbol;Acc:MGI:1194505]
85. Slc25a5 ENSMUSG00000016319 99.73 1036.10 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
86. Meg3 ENSMUSG00000021268 97.03 1008.04 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
87. Rps3a1 ENSMUSG00000028081 96.13 998.69 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
88. Ago2 ENSMUSG00000036698 94.34 980.10 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
89. U2af2 ENSMUSG00000030435 94.34 980.10 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
90. Ybx3 ENSMUSG00000030189 90.74 942.70 Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]
91. Shmt2 ENSMUSG00000025403 89.84 933.35 serine hydroxymethyltransferase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1277989]
92. Ngfrap1 88.95 924.10 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
93. Tmsb4x ENSMUSG00000049775 88.95 924.10 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
94. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 87.15 905.40 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
95. Cdkn1c ENSMUSG00000037664 87.15 905.40 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
96. Fkbp4 ENSMUSG00000030357 87.15 905.40 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
97. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 86.25 896.05 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
98. Cdk1 ENSMUSG00000019942 84.45 877.35 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
99. Gm14586 ENSMUSG00000083621 83.56 868.10 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
100. Prdx1 ENSMUSG00000028691 83.56 868.10 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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