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Experiment Mouse_E11_5_slice_1, section s8.

Sample reads: 96,256. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 4803.51 49903.25 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 3934.55 40875.70 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Cytb ENSMUSG00000064370 2804.04 29130.93 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 2045.62 21251.77 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 1703.74 17700.01 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd5 ENSMUSG00000064367 1625.10 16883.02 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
7. mt-Atp6 ENSMUSG00000064357 1615.99 16788.38 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
8. mt-Co2 ENSMUSG00000064354 1338.49 13905.46 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. mt-Nd2 ENSMUSG00000064345 1051.87 10927.79 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Co1 ENSMUSG00000064351 830.22 8625.08 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. Actb ENSMUSG00000029580 516.82 5369.20 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Eef1a1 ENSMUSG00000037742 443.88 4611.43 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. Hbb-y ENSMUSG00000052187 429.64 4463.49 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
14. mt-Co3 ENSMUSG00000064358 429.64 4463.49 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. mt-Rnr1 ENSMUSG00000064337 419.38 4356.90 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
16. mt-Nd3 ENSMUSG00000064360 416.53 4327.29 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
17. Mdk ENSMUSG00000027239 368.10 3824.16 midkine [Source:MGI Symbol;Acc:MGI:96949]
18. Gm13340 ENSMUSG00000083563 349.29 3628.74 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Pkm ENSMUSG00000032294 299.15 3107.84 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
20. Rpsa ENSMUSG00000032518 296.87 3084.16 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. Hba-a1 ENSMUSG00000069919 294.02 3054.55 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
22. Nedd4 ENSMUSG00000032216 291.17 3024.94 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. Npm1 ENSMUSG00000057113 271.80 2823.71 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Tuba1b ENSMUSG00000023004 268.38 2788.18 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
25. Cfl1 ENSMUSG00000056201 246.73 2563.26 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
26. Set ENSMUSG00000054766 245.59 2551.41 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
27. Tubb5 ENSMUSG00000001525 231.91 2409.29 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
28. Rrm2 ENSMUSG00000020649 222.23 2308.73 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
29. Tuba1a ENSMUSG00000072235 220.52 2290.96 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
30. Ybx1 ENSMUSG00000028639 220.52 2290.96 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
31. Hsp90ab1 ENSMUSG00000023944 205.13 2131.08 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Hba-x ENSMUSG00000055609 197.15 2048.17 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
33. Tpt1 ENSMUSG00000060126 193.17 2006.83 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Ubb ENSMUSG00000019505 190.32 1977.22 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
35. Rpl4 ENSMUSG00000032399 189.75 1971.30 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Tubb2b ENSMUSG00000045136 186.90 1941.69 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
37. Malat1 ENSMUSG00000092341 184.62 1918.00 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
38. Eif4g2 ENSMUSG00000005610 181.20 1882.47 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
39. Hnrnpc ENSMUSG00000060373 178.35 1852.86 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
40. Hsp90aa1 ENSMUSG00000021270 170.37 1769.96 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
41. Eif5a ENSMUSG00000078812 164.68 1710.85 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
42. Paics ENSMUSG00000029247 164.11 1704.92 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
43. H19 ENSMUSG00000000031 161.83 1681.24 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
44. Hbb-bh1 ENSMUSG00000052217 160.69 1669.39 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
45. Igf2 ENSMUSG00000048583 153.85 1598.33 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
46. Gm10800 ENSMUSG00000075014 152.14 1580.57 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
47. Map1b ENSMUSG00000052727 152.14 1580.57 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
48. Tmsb4x ENSMUSG00000049775 151.00 1568.73 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
49. Chchd2 ENSMUSG00000070493 147.01 1527.27 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
50. Atp5g3 ENSMUSG00000018770 146.44 1521.35 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
51. Ndufa12 ENSMUSG00000020022 144.16 1497.67 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
52. Banf1 ENSMUSG00000024844 142.45 1479.90 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
53. Rpl23 ENSMUSG00000071415 134.48 1397.10 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
54. Fkbp1a ENSMUSG00000032966 133.91 1391.18 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
55. Ran ENSMUSG00000029430 130.49 1355.65 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
56. Hmga2 ENSMUSG00000056758 129.92 1349.73 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
57. Rps26 ENSMUSG00000025362 128.78 1337.88 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
58. Rpl18a ENSMUSG00000045128 124.22 1290.51 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
59. Eef1b2 ENSMUSG00000025967 122.51 1272.75 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
60. Grb10 ENSMUSG00000020176 122.51 1272.75 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
61. Rps20 ENSMUSG00000028234 119.09 1237.22 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
62. Gm17132 ENSMUSG00000061331 115.67 1201.69 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
63. Rplp1 ENSMUSG00000007892 113.96 1183.92 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
64. Fscn1 ENSMUSG00000029581 112.82 1172.08 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
65. Top2a ENSMUSG00000020914 112.25 1166.16 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
66. Hba-a2 ENSMUSG00000069917 111.11 1154.31 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
67. U2af2 ENSMUSG00000030435 110.54 1148.39 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
68. Ldha ENSMUSG00000063229 107.69 1118.78 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
69. Pabpc1 ENSMUSG00000022283 107.12 1112.86 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
70. Tecr ENSMUSG00000031708 105.42 1095.20 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
71. Cox8a ENSMUSG00000035885 104.28 1083.36 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
72. Ywhab ENSMUSG00000018326 104.28 1083.36 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
73. Rps4x ENSMUSG00000031320 103.14 1071.51 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
74. Tubb3 ENSMUSG00000062380 101.43 1053.75 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
75. Cdk4 ENSMUSG00000006728 100.86 1047.83 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
76. Anp32b ENSMUSG00000028333 99.15 1030.06 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
77. Rps5 ENSMUSG00000012848 98.58 1024.14 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
78. Ywhae ENSMUSG00000020849 98.01 1018.22 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
79. Myl6 ENSMUSG00000090841 97.44 1012.30 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
80. Pcbp1 ENSMUSG00000051695 96.87 1006.37 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
81. Trp53i11 ENSMUSG00000068735 96.87 1006.37 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
82. Crabp1 ENSMUSG00000032291 95.73 994.53 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
83. Marcks ENSMUSG00000069662 94.02 976.77 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
84. Cadm1 ENSMUSG00000032076 93.45 970.84 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
85. 2810417H13Rik 92.31 959.00 RIKEN cDNA 2810417H13 gene
86. Lamp1 ENSMUSG00000031447 92.31 959.00 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
87. Hmgn1 ENSMUSG00000040681 91.74 953.08 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
88. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 91.74 953.08 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
89. Hnrnpa0 ENSMUSG00000007836 91.17 947.16 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
90. Stmn1 ENSMUSG00000028832 91.17 947.16 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
91. Trim28 ENSMUSG00000005566 91.17 947.16 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
92. Hnrnpa2b1 ENSMUSG00000004980 90.03 935.31 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
93. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 88.32 917.55 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
94. Cd24a ENSMUSG00000047139 87.18 905.71 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
95. Son ENSMUSG00000022961 86.61 899.78 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
96. Eef2 ENSMUSG00000034994 86.04 893.86 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
97. Basp1 ENSMUSG00000045763 85.47 887.94 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
98. Ccnd2 ENSMUSG00000000184 83.76 870.18 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
99. Sub1 ENSMUSG00000022205 82.62 858.33 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
100. Gm26924 Gm26924 82.05 852.41
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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