Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_1, section s79.

Sample reads: 96,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3994.06 41500.04 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2297.41 23871.10 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Nd4 ENSMUSG00000064363 2211.59 22979.39 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Nd1 ENSMUSG00000064341 2059.75 21401.71 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Rnr2 ENSMUSG00000064339 1980.53 20578.58 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Co2 ENSMUSG00000064354 1914.51 19892.60 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Atp6 ENSMUSG00000064357 1756.07 18246.34 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
8. mt-Nd2 ENSMUSG00000064345 1135.50 11798.34 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Nd3 ENSMUSG00000064360 983.66 10220.66 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Co1 ENSMUSG00000064351 937.45 9740.52 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. Gm10800 ENSMUSG00000075014 897.84 9328.95 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
12. H19 ENSMUSG00000000031 785.61 8162.83 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Hbb-y ENSMUSG00000052187 646.97 6722.30 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
14. Hba-a1 ENSMUSG00000069919 640.37 6653.73 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
15. mt-Co3 ENSMUSG00000064358 594.16 6173.58 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. mt-Nd5 ENSMUSG00000064367 534.74 5556.18 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
17. Hba-x ENSMUSG00000055609 521.54 5419.03 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
18. Mdk ENSMUSG00000027239 488.53 5076.04 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Actb ENSMUSG00000029580 442.32 4595.90 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
20. Eef1a1 ENSMUSG00000037742 442.32 4595.90 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
21. Gm13340 ENSMUSG00000083563 369.70 3841.35 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Igf2 ENSMUSG00000048583 343.29 3566.93 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
23. Set ENSMUSG00000054766 336.69 3498.36 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
24. Hbb-bh1 ENSMUSG00000052217 316.88 3292.52 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
25. Rpsa ENSMUSG00000032518 316.88 3292.52 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
26. Npm1 ENSMUSG00000057113 264.07 2743.80 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
27. Hba-a2 ENSMUSG00000069917 250.87 2606.65 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
28. Pkm ENSMUSG00000032294 250.87 2606.65 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
29. Rpl4 ENSMUSG00000032399 244.26 2537.97 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
30. Hsp90ab1 ENSMUSG00000023944 237.66 2469.39 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
31. Rpl37 ENSMUSG00000041841 231.06 2400.81 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
32. Rrm2 ENSMUSG00000020649 224.46 2332.24 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
33. Banf1 ENSMUSG00000024844 217.86 2263.66 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
34. Hmga2 ENSMUSG00000056758 217.86 2263.66 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
35. Hsp90aa1 ENSMUSG00000021270 217.86 2263.66 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
36. Hbb-bt ENSMUSG00000073940 211.26 2195.08 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
37. Rps20 ENSMUSG00000028234 211.26 2195.08 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
38. Tubb5 ENSMUSG00000001525 211.26 2195.08 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
39. mt-Rnr1 ENSMUSG00000064337 204.65 2126.40 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
40. Ubb ENSMUSG00000019505 198.05 2057.83 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
41. Eif4g2 ENSMUSG00000005610 191.45 1989.25 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
42. Tpt1 ENSMUSG00000060126 191.45 1989.25 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
43. Tuba1b ENSMUSG00000023004 191.45 1989.25 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
44. Ago2 ENSMUSG00000036698 184.85 1920.67 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
45. Rpl18a ENSMUSG00000045128 184.85 1920.67 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
46. Afp ENSMUSG00000054932 178.25 1852.10 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
47. Cfl1 ENSMUSG00000056201 178.25 1852.10 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
48. Rpl23 ENSMUSG00000071415 178.25 1852.10 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
49. Hbb-bs ENSMUSG00000052305 171.65 1783.52 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
50. Rplp1 ENSMUSG00000007892 171.65 1783.52 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
51. Eif5a ENSMUSG00000078812 151.84 1577.68 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
52. Grb10 ENSMUSG00000020176 151.84 1577.68 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
53. Myl6 ENSMUSG00000090841 151.84 1577.68 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
54. Nedd4 ENSMUSG00000032216 151.84 1577.68 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
55. Pabpc1 ENSMUSG00000022283 145.24 1509.11 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
56. Eef1b2 ENSMUSG00000025967 138.64 1440.53 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. Chchd2 ENSMUSG00000070493 132.04 1371.95 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
58. Ndufa12 ENSMUSG00000020022 125.43 1303.27 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
59. Hmgn1 ENSMUSG00000040681 118.83 1234.70 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
60. Ldha ENSMUSG00000063229 118.83 1234.70 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
61. Paics ENSMUSG00000029247 118.83 1234.70 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
62. Sub1 ENSMUSG00000022205 118.83 1234.70 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
63. Wbp5 118.83 1234.70 WW domain binding protein 5
64. Cycs ENSMUSG00000063694 112.23 1166.12 cytochrome c, somatic [Source:MGI Symbol;Acc:MGI:88578]
65. Gm5805 ENSMUSG00000061848 112.23 1166.12 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
66. Meg3 ENSMUSG00000021268 112.23 1166.12 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
67. Ncl ENSMUSG00000026234 112.23 1166.12 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
68. Ngfrap1 112.23 1166.12 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
69. Pcbp1 ENSMUSG00000051695 112.23 1166.12 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
70. Ran ENSMUSG00000029430 112.23 1166.12 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
71. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 112.23 1166.12 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
72. Trim28 ENSMUSG00000005566 112.23 1166.12 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
73. U2af2 ENSMUSG00000030435 112.23 1166.12 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
74. Ywhab ENSMUSG00000018326 112.23 1166.12 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
75. Fkbp1a ENSMUSG00000032966 105.63 1097.54 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
76. Pf4 ENSMUSG00000029373 105.63 1097.54 platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
77. Psat1 ENSMUSG00000024640 105.63 1097.54 phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
78. Rpl32 ENSMUSG00000057841 105.63 1097.54 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
79. Rps26 ENSMUSG00000025362 105.63 1097.54 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
80. Stmn1 ENSMUSG00000028832 105.63 1097.54 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
81. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 99.03 1028.97 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
82. Atp5g3 ENSMUSG00000018770 99.03 1028.97 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
83. Hnrnpc ENSMUSG00000060373 99.03 1028.97 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
84. Rpl8 ENSMUSG00000003970 99.03 1028.97 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
85. Rps3a1 ENSMUSG00000028081 99.03 1028.97 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
86. Tecr ENSMUSG00000031708 99.03 1028.97 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
87. Ywhaz ENSMUSG00000022285 99.03 1028.97 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
88. Anp32b ENSMUSG00000028333 92.42 960.28 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
89. Cdk1 ENSMUSG00000019942 92.42 960.28 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
90. Hspe1 ENSMUSG00000073676 92.42 960.28 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
91. Igfbp4 ENSMUSG00000017493 92.42 960.28 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
92. Mapre1 ENSMUSG00000027479 92.42 960.28 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
93. Rpl26 ENSMUSG00000060938 92.42 960.28 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
94. Rpl39-ps ENSMUSG00000036305 92.42 960.28 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
95. Rps4x ENSMUSG00000031320 92.42 960.28 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
96. Capns1 ENSMUSG00000001794 85.82 891.71 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
97. Eef2 ENSMUSG00000034994 85.82 891.71 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
98. Elp2 ENSMUSG00000024271 85.82 891.71 elongator acetyltransferase complex subunit 2 [Source:MGI Symbol;Acc:MGI:1889642]
99. Gm14303 ENSMUSG00000081344 85.82 891.71 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
100. Hdgf ENSMUSG00000004897 85.82 891.71 hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA