Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_1, section s75.

Sample reads: 96,245. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3370.30 35017.99 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Rnr2 ENSMUSG00000064339 3163.11 32865.25 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Nd4 ENSMUSG00000064363 2500.10 25976.47 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. Ptma ENSMUSG00000026238 2486.29 25832.98 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Nd1 ENSMUSG00000064341 2361.97 24541.27 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 1961.40 20379.28 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 1754.21 18226.54 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. Gm10800 ENSMUSG00000075014 1491.77 15499.74 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
9. mt-Nd2 ENSMUSG00000064345 1436.52 14925.69 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. Mdk ENSMUSG00000027239 1022.14 10620.21 midkine [Source:MGI Symbol;Acc:MGI:96949]
11. mt-Nd3 ENSMUSG00000064360 1022.14 10620.21 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. H19 ENSMUSG00000000031 1008.33 10476.72 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Actb ENSMUSG00000029580 759.70 7893.41 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. mt-Co1 ENSMUSG00000064351 663.01 6888.79 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
15. mt-Nd5 ENSMUSG00000064367 607.76 6314.73 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
16. mt-Co3 ENSMUSG00000064358 455.82 4736.05 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. Eef1a1 ENSMUSG00000037742 400.57 4161.99 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
18. Igf2 ENSMUSG00000048583 359.13 3731.42 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. mt-Rnr1 ENSMUSG00000064337 359.13 3731.42 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
20. Npm1 ENSMUSG00000057113 317.69 3300.85 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Gm13340 ENSMUSG00000083563 303.88 3157.37 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Tubb5 ENSMUSG00000001525 303.88 3157.37 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
23. Rpl18a ENSMUSG00000045128 276.25 2870.28 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
24. Cfl1 ENSMUSG00000056201 221.00 2296.23 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Nedd4 ENSMUSG00000032216 221.00 2296.23 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Gm17132 ENSMUSG00000061331 207.19 2152.74 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
27. Malat1 ENSMUSG00000092341 207.19 2152.74 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
28. Rpl37 ENSMUSG00000041841 207.19 2152.74 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
29. Ywhab ENSMUSG00000018326 207.19 2152.74 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
30. Hmga2 ENSMUSG00000056758 193.38 2009.25 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
31. Rpl23 ENSMUSG00000071415 193.38 2009.25 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
32. Rpl4 ENSMUSG00000032399 193.38 2009.25 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
33. Tpt1 ENSMUSG00000060126 193.38 2009.25 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Tuba1b ENSMUSG00000023004 193.38 2009.25 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
35. Ubb ENSMUSG00000019505 193.38 2009.25 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
36. Hbb-y ENSMUSG00000052187 179.57 1865.76 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
37. Hnrnpc ENSMUSG00000060373 179.57 1865.76 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
38. Ndufa12 ENSMUSG00000020022 179.57 1865.76 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
39. Rrm2 ENSMUSG00000020649 179.57 1865.76 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
40. Banf1 ENSMUSG00000024844 165.75 1722.17 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
41. Eif4g2 ENSMUSG00000005610 165.75 1722.17 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
42. Grb10 ENSMUSG00000020176 165.75 1722.17 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
43. Hsp90ab1 ENSMUSG00000023944 165.75 1722.17 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
44. Ngfrap1 165.75 1722.17 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
45. Ran ENSMUSG00000029430 165.75 1722.17 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
46. Rpsa ENSMUSG00000032518 165.75 1722.17 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
47. U2af2 ENSMUSG00000030435 165.75 1722.17 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
48. Myl6 ENSMUSG00000090841 151.94 1578.68 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
49. Peg3 ENSMUSG00000002265 151.94 1578.68 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
50. Set ENSMUSG00000054766 151.94 1578.68 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
51. Adprh ENSMUSG00000002844 138.13 1435.19 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
52. Atp5g3 ENSMUSG00000018770 138.13 1435.19 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
53. Gm5805 ENSMUSG00000061848 138.13 1435.19 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
54. Hba-a1 ENSMUSG00000069919 138.13 1435.19 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
55. Hba-x ENSMUSG00000055609 138.13 1435.19 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
56. Pabpc1 ENSMUSG00000022283 138.13 1435.19 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
57. Rps20 ENSMUSG00000028234 138.13 1435.19 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
58. Lamp1 ENSMUSG00000031447 124.31 1291.60 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
59. Marcksl1 ENSMUSG00000047945 124.31 1291.60 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
60. Pcbp1 ENSMUSG00000051695 124.31 1291.60 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
61. Pkm ENSMUSG00000032294 124.31 1291.60 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
62. Rps5 ENSMUSG00000012848 124.31 1291.60 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
63. Sepw1 124.31 1291.60 selenoprotein W, muscle 1
64. Stmn1 ENSMUSG00000028832 124.31 1291.60 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
65. Ybx1 ENSMUSG00000028639 124.31 1291.60 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
66. Chchd2 ENSMUSG00000070493 110.50 1148.11 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
67. Dstn ENSMUSG00000015932 110.50 1148.11 destrin [Source:MGI Symbol;Acc:MGI:1929270]
68. Fkbp1a ENSMUSG00000032966 110.50 1148.11 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
69. Flrt3 ENSMUSG00000051379 110.50 1148.11 fibronectin leucine rich transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:1918686]
70. Gm10801 ENSMUSG00000075015 110.50 1148.11 predicted gene 10801 [Source:MGI Symbol;Acc:MGI:3641656]
71. Gm14303 ENSMUSG00000081344 110.50 1148.11 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
72. Hmgn1 ENSMUSG00000040681 110.50 1148.11 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
73. Hsp90aa1 ENSMUSG00000021270 110.50 1148.11 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
74. Hspe1 ENSMUSG00000073676 110.50 1148.11 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
75. Paics ENSMUSG00000029247 110.50 1148.11 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
76. Rps4x ENSMUSG00000031320 110.50 1148.11 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
77. Arpc2 ENSMUSG00000006304 96.69 1004.63 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
78. Ccnd2 ENSMUSG00000000184 96.69 1004.63 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
79. Eef1b2 ENSMUSG00000025967 96.69 1004.63 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
80. Eif5a ENSMUSG00000078812 96.69 1004.63 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
81. Hjurp ENSMUSG00000044783 96.69 1004.63 Holliday junction recognition protein [Source:MGI Symbol;Acc:MGI:2685821]
82. Krt8 ENSMUSG00000049382 96.69 1004.63 keratin 8 [Source:MGI Symbol;Acc:MGI:96705]
83. Nepn ENSMUSG00000038624 96.69 1004.63 nephrocan [Source:MGI Symbol;Acc:MGI:1913900]
84. Rpl3-ps1 ENSMUSG00000084349 96.69 1004.63 ribosomal protein L3, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644217]
85. Rps26 ENSMUSG00000025362 96.69 1004.63 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
86. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 96.69 1004.63 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
87. Sf3b4 ENSMUSG00000068856 96.69 1004.63 splicing factor 3b, subunit 4 [Source:MGI Symbol;Acc:MGI:109580]
88. Srrm2 ENSMUSG00000039218 96.69 1004.63 serine/arginine repetitive matrix 2 [Source:MGI Symbol;Acc:MGI:1923206]
89. Srsf3 ENSMUSG00000071172 96.69 1004.63 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
90. Sub1 ENSMUSG00000022205 96.69 1004.63 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
91. Tecr ENSMUSG00000031708 96.69 1004.63 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
92. Ywhae ENSMUSG00000020849 96.69 1004.63 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
93. Arf1 ENSMUSG00000048076 82.88 861.14 ADP-ribosylation factor 1 [Source:MGI Symbol;Acc:MGI:99431]
94. Caprin1 ENSMUSG00000027184 82.88 861.14 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
95. Cct2 ENSMUSG00000034024 82.88 861.14 chaperonin containing Tcp1, subunit 2 (beta) [Source:MGI Symbol;Acc:MGI:107186]
96. Cd24a ENSMUSG00000047139 82.88 861.14 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
97. Cdk4 ENSMUSG00000006728 82.88 861.14 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
98. Cks1b ENSMUSG00000028044 82.88 861.14 CDC28 protein kinase 1b [Source:MGI Symbol;Acc:MGI:1889208]
99. Cox8a ENSMUSG00000035885 82.88 861.14 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
100. Crtap ENSMUSG00000032431 82.88 861.14 cartilage associated protein [Source:MGI Symbol;Acc:MGI:1891221]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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