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Experiment Mouse_E11_5_slice_1, section s7.

Sample reads: 96,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4616.78 47971.55 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Rnr2 ENSMUSG00000064339 2759.10 28668.97 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Cytb ENSMUSG00000064370 2270.01 23586.98 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 1788.23 18580.95 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Atp6 ENSMUSG00000064357 1617.15 16803.31 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Nd1 ENSMUSG00000064341 1606.92 16697.02 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co2 ENSMUSG00000064354 1343.73 13962.29 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 973.80 10118.46 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 837.82 8705.53 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd5 ENSMUSG00000064367 724.50 7528.06 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. Actb ENSMUSG00000029580 570.24 5925.19 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Hbb-y ENSMUSG00000052187 559.28 5811.31 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. Eef1a1 ENSMUSG00000037742 474.47 4930.07 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. mt-Nd3 ENSMUSG00000064360 432.80 4497.09 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
15. mt-Co3 ENSMUSG00000064358 407.94 4238.78 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Pkm ENSMUSG00000032294 366.27 3805.80 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
17. Gm13340 ENSMUSG00000083563 356.77 3707.09 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Tuba1b ENSMUSG00000023004 328.99 3418.43 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
19. Hba-a1 ENSMUSG00000069919 326.79 3395.58 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
20. Mdk ENSMUSG00000027239 321.68 3342.48 midkine [Source:MGI Symbol;Acc:MGI:96949]
21. Rpsa ENSMUSG00000032518 304.86 3167.71 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Npm1 ENSMUSG00000057113 285.85 2970.18 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. mt-Rnr1 ENSMUSG00000064337 277.81 2886.64 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
24. Hba-x ENSMUSG00000055609 269.04 2795.51 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
25. Tubb5 ENSMUSG00000001525 263.19 2734.73 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Nedd4 ENSMUSG00000032216 261.73 2719.56 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
27. Ybx1 ENSMUSG00000028639 252.95 2628.33 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
28. Hsp90ab1 ENSMUSG00000023944 251.49 2613.16 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
29. Cfl1 ENSMUSG00000056201 250.03 2597.99 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
30. Hnrnpc ENSMUSG00000060373 241.99 2514.44 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
31. Ubb ENSMUSG00000019505 228.10 2370.12 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
32. Tuba1a ENSMUSG00000072235 222.98 2316.92 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
33. Hbb-bh1 ENSMUSG00000052217 222.25 2309.33 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
34. Rrm2 ENSMUSG00000020649 215.67 2240.96 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
35. U2af2 ENSMUSG00000030435 201.78 2096.63 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
36. H19 ENSMUSG00000000031 198.85 2066.19 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
37. Set ENSMUSG00000054766 198.85 2066.19 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
38. Eif4g2 ENSMUSG00000005610 198.12 2058.60 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
39. Tpt1 ENSMUSG00000060126 195.20 2028.26 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
40. Eif5a ENSMUSG00000078812 189.35 1967.48 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
41. Rpl4 ENSMUSG00000032399 186.43 1937.14 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Tubb2b ENSMUSG00000045136 179.12 1861.18 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
43. Crabp1 ENSMUSG00000032291 177.65 1845.91 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
44. Banf1 ENSMUSG00000024844 176.92 1838.32 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
45. Map1b ENSMUSG00000052727 168.15 1747.20 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
46. Paics ENSMUSG00000029247 167.42 1739.61 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
47. Atp5g3 ENSMUSG00000018770 163.03 1694.00 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
48. Gm10800 ENSMUSG00000075014 160.84 1671.24 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
49. Fkbp1a ENSMUSG00000032966 150.60 1564.84 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
50. Ndufa12 ENSMUSG00000020022 149.14 1549.67 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
51. Rpl23 ENSMUSG00000071415 144.75 1504.05 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
52. Tmsb4x ENSMUSG00000049775 143.29 1488.88 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
53. Hsp90aa1 ENSMUSG00000021270 138.17 1435.68 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
54. Myl6 ENSMUSG00000090841 135.98 1412.93 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
55. Hba-a2 ENSMUSG00000069917 135.25 1405.34 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
56. Chchd2 ENSMUSG00000070493 133.79 1390.17 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
57. Ran ENSMUSG00000029430 133.79 1390.17 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
58. Trim28 ENSMUSG00000005566 130.86 1359.73 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
59. Malat1 ENSMUSG00000092341 130.13 1352.14 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
60. Anp32b ENSMUSG00000028333 127.21 1321.80 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
61. Rpl18a ENSMUSG00000045128 125.02 1299.04 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
62. Trp53i11 ENSMUSG00000068735 125.02 1299.04 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
63. Eef1b2 ENSMUSG00000025967 121.36 1261.01 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
64. Pabpc1 ENSMUSG00000022283 120.63 1253.43 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
65. Ccnd2 ENSMUSG00000000184 118.44 1230.67 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
66. Igf2 ENSMUSG00000048583 118.44 1230.67 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
67. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 118.44 1230.67 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
68. Grb10 ENSMUSG00000020176 117.70 1222.98 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
69. Ywhab ENSMUSG00000018326 117.70 1222.98 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
70. Hmga2 ENSMUSG00000056758 113.32 1177.47 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
71. Sox2 ENSMUSG00000074637 113.32 1177.47 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
72. Stmn1 ENSMUSG00000028832 113.32 1177.47 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
73. Ywhae ENSMUSG00000020849 113.32 1177.47 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
74. Pcbp1 ENSMUSG00000051695 111.12 1154.61 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
75. Rps26 ENSMUSG00000025362 111.12 1154.61 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
76. Lamp1 ENSMUSG00000031447 110.39 1147.03 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
77. 2810417H13Rik 108.20 1124.27 RIKEN cDNA 2810417H13 gene
78. Rps5 ENSMUSG00000012848 107.47 1116.69 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
79. Rplp1 ENSMUSG00000007892 100.89 1048.32 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
80. Hmgn1 ENSMUSG00000040681 100.16 1040.73 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
81. Ngfrap1 100.16 1040.73 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
82. Marcks ENSMUSG00000069662 99.43 1033.15 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
83. Plagl1 ENSMUSG00000019817 99.43 1033.15 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
84. Rps20 ENSMUSG00000028234 99.43 1033.15 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
85. Rps3a1 ENSMUSG00000028081 99.43 1033.15 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
86. Tecr ENSMUSG00000031708 99.43 1033.15 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
87. Hnrnpa0 ENSMUSG00000007836 98.70 1025.56 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
88. Rps4x ENSMUSG00000031320 97.96 1017.87 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
89. Top2a ENSMUSG00000020914 97.96 1017.87 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
90. Fscn1 ENSMUSG00000029581 97.23 1010.29 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
91. Caprin1 ENSMUSG00000027184 96.50 1002.70 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
92. Hnrnpa2b1 ENSMUSG00000004980 95.77 995.12 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
93. Sub1 ENSMUSG00000022205 94.31 979.95 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
94. Tubb3 ENSMUSG00000062380 94.31 979.95 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
95. Ldha ENSMUSG00000063229 92.12 957.19 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
96. Gm5805 ENSMUSG00000061848 89.92 934.33 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
97. Top1 ENSMUSG00000070544 89.19 926.75 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
98. Cdk4 ENSMUSG00000006728 87.00 903.99 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
99. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 87.00 903.99 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
100. Marcksl1 ENSMUSG00000047945 86.27 896.41 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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