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Experiment Mouse_E11_5_slice_1, section s65.

Sample reads: 96,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 3713.95 38590.82 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 3703.25 38479.64 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Cytb ENSMUSG00000064370 3671.14 38145.99 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 2450.99 25467.69 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 1867.68 19406.64 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 1755.30 18238.93 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 1466.31 15236.10 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 1086.36 11288.12 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. Actb ENSMUSG00000029580 893.70 9286.24 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Co1 ENSMUSG00000064351 797.38 8285.40 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. Mdk ENSMUSG00000027239 727.81 7562.51 midkine [Source:MGI Symbol;Acc:MGI:96949]
12. Igf2 ENSMUSG00000048583 647.53 6728.34 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
13. mt-Nd5 ENSMUSG00000064367 631.48 6561.57 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
14. H19 ENSMUSG00000000031 626.13 6505.98 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
15. mt-Nd3 ENSMUSG00000064360 626.13 6505.98 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
16. Hmga2 ENSMUSG00000056758 535.15 5560.62 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
17. mt-Co3 ENSMUSG00000064358 449.53 4670.97 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Gm10800 ENSMUSG00000075014 433.47 4504.09 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
19. Hbb-y ENSMUSG00000052187 406.71 4226.03 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
20. Eef1a1 ENSMUSG00000037742 363.90 3781.20 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
21. Hsp90ab1 ENSMUSG00000023944 331.79 3447.56 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
22. mt-Rnr1 ENSMUSG00000064337 278.28 2891.54 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
23. Cfl1 ENSMUSG00000056201 267.58 2780.36 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
24. Gm13340 ENSMUSG00000083563 262.22 2724.67 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
25. Npm1 ENSMUSG00000057113 262.22 2724.67 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
26. Tuba1b ENSMUSG00000023004 262.22 2724.67 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
27. Nedd4 ENSMUSG00000032216 246.17 2557.90 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
28. Hba-x ENSMUSG00000055609 230.11 2391.02 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
29. Rpl4 ENSMUSG00000032399 230.11 2391.02 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
30. Set ENSMUSG00000054766 230.11 2391.02 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
31. Hba-a1 ENSMUSG00000069919 224.76 2335.43 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
32. Banf1 ENSMUSG00000024844 214.06 2224.25 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
33. Rpsa ENSMUSG00000032518 208.71 2168.66 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
34. Grb10 ENSMUSG00000020176 203.36 2113.07 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
35. Tpt1 ENSMUSG00000060126 203.36 2113.07 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
36. Peg3 ENSMUSG00000002265 198.01 2057.48 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
37. Hnrnpc ENSMUSG00000060373 181.95 1890.60 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
38. Ybx1 ENSMUSG00000028639 181.95 1890.60 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
39. Pkm ENSMUSG00000032294 176.60 1835.01 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
40. Rrm2 ENSMUSG00000020649 176.60 1835.01 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
41. Ubb ENSMUSG00000019505 176.60 1835.01 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
42. Fkbp1a ENSMUSG00000032966 171.25 1779.42 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
43. Ran ENSMUSG00000029430 165.90 1723.83 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
44. Hbb-bh1 ENSMUSG00000052217 160.55 1668.24 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
45. Paics ENSMUSG00000029247 155.19 1612.54 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
46. Tubb5 ENSMUSG00000001525 155.19 1612.54 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
47. Ago2 ENSMUSG00000036698 149.84 1556.95 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
48. Chchd2 ENSMUSG00000070493 149.84 1556.95 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
49. Gm17132 ENSMUSG00000061331 149.84 1556.95 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
50. Myl6 ENSMUSG00000090841 149.84 1556.95 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
51. Atp5g3 ENSMUSG00000018770 139.14 1445.77 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
52. Eif4g2 ENSMUSG00000005610 139.14 1445.77 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
53. Ywhab ENSMUSG00000018326 139.14 1445.77 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
54. Ngfrap1 133.79 1390.18 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
55. Pabpc1 ENSMUSG00000022283 133.79 1390.18 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
56. Plagl1 ENSMUSG00000019817 133.79 1390.18 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
57. Rpl23 ENSMUSG00000071415 133.79 1390.18 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
58. Rps20 ENSMUSG00000028234 133.79 1390.18 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
59. U2af2 ENSMUSG00000030435 133.79 1390.18 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
60. Eef1b2 ENSMUSG00000025967 128.44 1334.59 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
61. Malat1 ENSMUSG00000092341 128.44 1334.59 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
62. Cdk4 ENSMUSG00000006728 123.08 1278.90 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
63. Pcbp1 ENSMUSG00000051695 123.08 1278.90 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
64. Anp32b ENSMUSG00000028333 117.73 1223.31 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
65. Hmgn1 ENSMUSG00000040681 117.73 1223.31 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
66. Pbx1 ENSMUSG00000052534 117.73 1223.31 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
67. Eif5a ENSMUSG00000078812 112.38 1167.72 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
68. Fscn1 ENSMUSG00000029581 112.38 1167.72 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
69. Morf4l1 ENSMUSG00000062270 112.38 1167.72 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
70. Ndufa12 ENSMUSG00000020022 112.38 1167.72 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
71. Hsp90aa1 ENSMUSG00000021270 107.03 1112.12 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
72. Hnrnpa2b1 ENSMUSG00000004980 101.68 1056.53 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
73. Lamp1 ENSMUSG00000031447 101.68 1056.53 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
74. Marcks ENSMUSG00000069662 101.68 1056.53 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
75. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 101.68 1056.53 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
76. Sub1 ENSMUSG00000022205 101.68 1056.53 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
77. Cox8a ENSMUSG00000035885 96.33 1000.94 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
78. Eif4b ENSMUSG00000058655 96.33 1000.94 eukaryotic translation initiation factor 4B [Source:MGI Symbol;Acc:MGI:95304]
79. Hba-a2 ENSMUSG00000069917 96.33 1000.94 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
80. Rps5 ENSMUSG00000012848 96.33 1000.94 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
81. Rps9 ENSMUSG00000006333 96.33 1000.94 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
82. Col3a1 ENSMUSG00000026043 90.98 945.35 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
83. Ddx5 ENSMUSG00000020719 90.98 945.35 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
84. Eif5 ENSMUSG00000021282 90.98 945.35 eukaryotic translation initiation factor 5 [Source:MGI Symbol;Acc:MGI:95309]
85. Gm5805 ENSMUSG00000061848 90.98 945.35 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
86. Rpl37 ENSMUSG00000041841 90.98 945.35 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
87. Rplp1 ENSMUSG00000007892 90.98 945.35 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
88. Wbp5 90.98 945.35 WW domain binding protein 5
89. Gnai2 ENSMUSG00000032562 85.62 889.66 guanine nucleotide binding protein (G protein), alpha inhibiting 2 [Source:MGI Symbol;Acc:MGI:95772]
90. Igfbp5 ENSMUSG00000026185 85.62 889.66 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
91. Tecr ENSMUSG00000031708 85.62 889.66 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
92. Gm15459 ENSMUSG00000100801 80.27 834.07 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
93. Maged1 ENSMUSG00000025151 80.27 834.07 melanoma antigen, family D, 1 [Source:MGI Symbol;Acc:MGI:1930187]
94. Rpl18a ENSMUSG00000045128 80.27 834.07 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
95. Rps4x ENSMUSG00000031320 80.27 834.07 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
96. Sfrp1 ENSMUSG00000031548 80.27 834.07 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
97. Son ENSMUSG00000022961 80.27 834.07 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
98. Tmpo ENSMUSG00000019961 80.27 834.07 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
99. Top1 ENSMUSG00000070544 80.27 834.07 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
100. Trim28 ENSMUSG00000005566 80.27 834.07 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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