Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_1, section s62.

Sample reads: 96,252. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 5192.52 53946.91 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 4217.83 43820.51 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Nd4 ENSMUSG00000064363 3417.27 35503.21 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Nd1 ENSMUSG00000064341 2950.96 30658.56 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2695.02 27999.51 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Atp6 ENSMUSG00000064357 2578.15 26785.30 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. Hbb-y ENSMUSG00000052187 1391.92 14461.14 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
8. mt-Co1 ENSMUSG00000064351 1131.30 11753.47 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd3 ENSMUSG00000064360 1123.12 11668.49 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Nd2 ENSMUSG00000064345 1049.49 10903.52 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. mt-Co3 ENSMUSG00000064358 806.40 8377.97 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Mdk ENSMUSG00000027239 794.71 8256.52 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. Hba-a1 ENSMUSG00000069919 677.84 7042.32 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
14. Actb ENSMUSG00000029580 619.41 6435.27 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. H19 ENSMUSG00000000031 575.00 5973.88 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
16. Hba-x ENSMUSG00000055609 542.28 5633.94 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
17. mt-Rnr2 ENSMUSG00000064339 506.05 5257.53 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
18. Gm13340 ENSMUSG00000083563 452.29 4699.00 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. mt-Nd5 ENSMUSG00000064367 435.92 4528.93 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
20. Hbb-bh1 ENSMUSG00000052217 410.21 4261.82 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
21. Eef1a1 ENSMUSG00000037742 404.37 4201.14 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
22. Igf2 ENSMUSG00000048583 321.39 3339.03 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
23. Hba-a2 ENSMUSG00000069917 319.05 3314.72 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
24. Npm1 ENSMUSG00000057113 316.72 3290.52 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Tuba1b ENSMUSG00000023004 308.54 3205.53 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Rpsa ENSMUSG00000032518 292.17 3035.46 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Pkm ENSMUSG00000032294 279.32 2901.95 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
28. Grb10 ENSMUSG00000020176 238.41 2476.92 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
29. Nedd4 ENSMUSG00000032216 231.40 2404.10 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
30. Tubb5 ENSMUSG00000001525 231.40 2404.10 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
31. Tpt1 ENSMUSG00000060126 217.38 2258.44 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
32. Ubb ENSMUSG00000019505 215.04 2234.13 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
33. Cfl1 ENSMUSG00000056201 191.67 1991.33 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
34. Hmga2 ENSMUSG00000056758 182.32 1894.19 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
35. Hsp90ab1 ENSMUSG00000023944 179.98 1869.88 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
36. Myl6 ENSMUSG00000090841 175.30 1821.25 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
37. Gm10800 ENSMUSG00000075014 170.63 1772.73 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
38. Eef1b2 ENSMUSG00000025967 162.45 1687.75 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
39. Rpl18a ENSMUSG00000045128 161.28 1675.59 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
40. Rpl23 ENSMUSG00000071415 160.11 1663.44 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
41. Rpl4 ENSMUSG00000032399 157.77 1639.13 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Rrm2 ENSMUSG00000020649 157.77 1639.13 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
43. U2af2 ENSMUSG00000030435 156.61 1627.08 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
44. Ngfrap1 155.44 1614.92 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
45. Paics ENSMUSG00000029247 155.44 1614.92 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
46. Banf1 ENSMUSG00000024844 154.27 1602.77 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
47. Chchd2 ENSMUSG00000070493 151.93 1578.45 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
48. Hnrnpc ENSMUSG00000060373 150.76 1566.30 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
49. Atp5g3 ENSMUSG00000018770 149.59 1554.14 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
50. Rps20 ENSMUSG00000028234 142.58 1481.31 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
51. Eif4g2 ENSMUSG00000005610 133.23 1384.17 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
52. Hsp90aa1 ENSMUSG00000021270 133.23 1384.17 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
53. Rps5 ENSMUSG00000012848 130.89 1359.86 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
54. Eif5a ENSMUSG00000078812 129.73 1347.81 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
55. Rps4x ENSMUSG00000031320 129.73 1347.81 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
56. Gm5805 ENSMUSG00000061848 126.22 1311.34 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
57. Fkbp1a ENSMUSG00000032966 123.88 1287.03 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
58. Rps26 ENSMUSG00000025362 122.71 1274.88 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
59. Igfbp4 ENSMUSG00000017493 116.87 1214.20 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
60. Anp32b ENSMUSG00000028333 114.53 1189.89 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
61. Tpm4 ENSMUSG00000031799 113.36 1177.74 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
62. Lamp1 ENSMUSG00000031447 112.19 1165.58 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
63. Ran ENSMUSG00000029430 112.19 1165.58 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
64. Rplp1 ENSMUSG00000007892 112.19 1165.58 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
65. Pabpc1 ENSMUSG00000022283 109.86 1141.37 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
66. Sub1 ENSMUSG00000022205 109.86 1141.37 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
67. Ndufa12 ENSMUSG00000020022 108.69 1129.22 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
68. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 107.52 1117.06 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
69. Ybx1 ENSMUSG00000028639 102.85 1068.54 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
70. Tecr ENSMUSG00000031708 101.68 1056.39 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
71. Hbb-bt ENSMUSG00000073940 100.51 1044.23 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
72. Gm14303 ENSMUSG00000081344 99.34 1032.08 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
73. Trim28 ENSMUSG00000005566 97.00 1007.77 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
74. Cdk1 ENSMUSG00000019942 94.66 983.46 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
75. Eef2 ENSMUSG00000034994 93.50 971.40 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
76. Sfrp1 ENSMUSG00000031548 93.50 971.40 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
77. mt-Rnr1 ENSMUSG00000064337 93.50 971.40 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
78. Rpl32 ENSMUSG00000057841 92.33 959.25 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
79. Cdkn1c ENSMUSG00000037664 87.65 910.63 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
80. Cox8a ENSMUSG00000035885 87.65 910.63 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
81. Hmgn1 ENSMUSG00000040681 86.48 898.47 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
82. Rpl37 ENSMUSG00000041841 86.48 898.47 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
83. Ywhab ENSMUSG00000018326 86.48 898.47 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
84. Cd24a ENSMUSG00000047139 85.31 886.32 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
85. Peg3 ENSMUSG00000002265 85.31 886.32 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
86. Cdk4 ENSMUSG00000006728 84.15 874.26 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
87. Prdx1 ENSMUSG00000028691 84.15 874.26 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
88. Rpl8 ENSMUSG00000003970 82.98 862.11 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
89. Hnrnph1 ENSMUSG00000007850 81.81 849.95 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
90. Ddx5 ENSMUSG00000020719 80.64 837.80 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
91. Ywhaq ENSMUSG00000076432 80.64 837.80 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
92. Gpc3 ENSMUSG00000055653 79.47 825.64 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
93. Pcbp1 ENSMUSG00000051695 78.30 813.49 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
94. Ago2 ENSMUSG00000036698 77.13 801.33 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
95. Rps9 ENSMUSG00000006333 75.97 789.28 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
96. Ywhae ENSMUSG00000020849 75.97 789.28 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
97. Hnrnpa0 ENSMUSG00000007836 74.80 777.12 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
98. Tuba1a ENSMUSG00000072235 74.80 777.12 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
99. Capns1 ENSMUSG00000001794 73.63 764.97 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
100. Hnrnpa2b1 ENSMUSG00000004980 73.63 764.97 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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