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Experiment Mouse_E11_5_slice_1, section s60.

Sample reads: 96,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4099.41 42596.46 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3506.52 36435.82 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd1 ENSMUSG00000064341 2143.60 22273.88 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Nd4 ENSMUSG00000064363 2134.15 22175.69 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Rnr2 ENSMUSG00000064339 2071.55 21525.22 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Atp6 ENSMUSG00000064357 2058.56 21390.24 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 2001.87 20801.18 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. Hbb-y ENSMUSG00000052187 1190.49 12370.23 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
9. mt-Co1 ENSMUSG00000064351 1047.59 10885.38 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd2 ENSMUSG00000064345 1009.79 10492.60 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. mt-Nd3 ENSMUSG00000064360 749.96 7792.74 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. mt-Nd5 ENSMUSG00000064367 683.83 7105.59 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
13. Actb ENSMUSG00000029580 662.57 6884.68 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. mt-Co3 ENSMUSG00000064358 636.58 6614.62 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. Hba-x ENSMUSG00000055609 630.68 6553.32 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
16. H19 ENSMUSG00000000031 623.59 6479.65 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. Hba-a1 ENSMUSG00000069919 596.43 6197.43 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
18. Mdk ENSMUSG00000027239 516.12 5362.94 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Igf2 ENSMUSG00000048583 448.80 4663.43 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
20. Eef1a1 ENSMUSG00000037742 445.25 4626.54 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
21. Hbb-bh1 ENSMUSG00000052217 441.71 4589.75 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
22. Hmga2 ENSMUSG00000056758 373.21 3877.98 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
23. Gm13340 ENSMUSG00000083563 359.04 3730.74 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
24. Gm10800 ENSMUSG00000075014 304.71 3166.20 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
25. Npm1 ENSMUSG00000057113 290.54 3018.97 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
26. Hba-a2 ENSMUSG00000069917 279.91 2908.51 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
27. Tubb5 ENSMUSG00000001525 253.92 2638.45 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
28. Pkm ENSMUSG00000032294 250.38 2601.67 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
29. Nedd4 ENSMUSG00000032216 232.67 2417.65 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
30. Tuba1b ENSMUSG00000023004 226.76 2356.24 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
31. Hsp90ab1 ENSMUSG00000023944 223.22 2319.45 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Rpsa ENSMUSG00000032518 223.22 2319.45 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
33. mt-Rnr1 ENSMUSG00000064337 222.04 2307.19 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
34. Grb10 ENSMUSG00000020176 212.59 2209.00 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
35. Ubb ENSMUSG00000019505 211.41 2196.74 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
36. Myl6 ENSMUSG00000090841 210.23 2184.47 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
37. Cfl1 ENSMUSG00000056201 209.05 2172.21 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
38. Tpt1 ENSMUSG00000060126 186.61 1939.04 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
39. Rpl4 ENSMUSG00000032399 178.34 1853.11 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
40. U2af2 ENSMUSG00000030435 170.07 1767.18 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
41. Ybx1 ENSMUSG00000028639 164.17 1705.87 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
42. Atp5g3 ENSMUSG00000018770 158.26 1644.46 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
43. Peg3 ENSMUSG00000002265 158.26 1644.46 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
44. Ngfrap1 149.99 1558.53 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
45. Pbx1 ENSMUSG00000052534 146.45 1521.74 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
46. Eif4g2 ENSMUSG00000005610 145.27 1509.48 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
47. Chchd2 ENSMUSG00000070493 141.73 1472.70 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
48. Set ENSMUSG00000054766 139.36 1448.07 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
49. Rpl23 ENSMUSG00000071415 138.18 1435.81 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
50. Ywhab ENSMUSG00000018326 137.00 1423.55 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
51. Eef1b2 ENSMUSG00000025967 135.82 1411.29 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
52. Rpl18a ENSMUSG00000045128 135.82 1411.29 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
53. Hnrnpc ENSMUSG00000060373 134.64 1399.03 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
54. Paics ENSMUSG00000029247 129.91 1349.88 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
55. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 127.55 1325.36 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
56. Pabpc1 ENSMUSG00000022283 125.19 1300.83 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
57. Banf1 ENSMUSG00000024844 124.01 1288.57 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
58. Lamp1 ENSMUSG00000031447 124.01 1288.57 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
59. Rps20 ENSMUSG00000028234 124.01 1288.57 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
60. Fkbp1a ENSMUSG00000032966 122.83 1276.31 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
61. Cdkn1c ENSMUSG00000037664 121.65 1264.05 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
62. Hbb-bt ENSMUSG00000073940 120.47 1251.79 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
63. Ago2 ENSMUSG00000036698 119.29 1239.53 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
64. Rrm2 ENSMUSG00000020649 116.92 1214.90 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
65. Wbp5 113.38 1178.12 WW domain binding protein 5
66. Ndufa12 ENSMUSG00000020022 112.20 1165.86 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
67. Trim28 ENSMUSG00000005566 112.20 1165.86 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
68. Rps26 ENSMUSG00000025362 109.84 1141.33 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
69. Cox8a ENSMUSG00000035885 108.66 1129.07 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
70. Eif5a ENSMUSG00000078812 106.29 1104.45 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
71. Rps4x ENSMUSG00000031320 105.11 1092.19 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
72. Rps5 ENSMUSG00000012848 103.93 1079.92 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
73. Anp32b ENSMUSG00000028333 99.21 1030.88 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
74. Rpl41 ENSMUSG00000093674 99.21 1030.88 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
75. Sub1 ENSMUSG00000022205 99.21 1030.88 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
76. Sfrp1 ENSMUSG00000031548 96.85 1006.36 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
77. Gm5805 ENSMUSG00000061848 95.66 993.99 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
78. Hnrnpa2b1 ENSMUSG00000004980 95.66 993.99 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
79. Igfbp4 ENSMUSG00000017493 93.30 969.47 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
80. Ran ENSMUSG00000029430 93.30 969.47 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
81. Gpc3 ENSMUSG00000055653 89.76 932.69 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
82. Pcbp1 ENSMUSG00000051695 89.76 932.69 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
83. Capn6 ENSMUSG00000067276 86.22 895.90 calpain 6 [Source:MGI Symbol;Acc:MGI:1100850]
84. Col1a1 ENSMUSG00000001506 86.22 895.90 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
85. Meg3 ENSMUSG00000021268 85.04 883.64 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
86. Son ENSMUSG00000022961 85.04 883.64 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
87. Gm17132 ENSMUSG00000061331 82.67 859.01 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
88. Hsp90aa1 ENSMUSG00000021270 82.67 859.01 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
89. Tpm4 ENSMUSG00000031799 82.67 859.01 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
90. Cdc42 ENSMUSG00000006699 81.49 846.75 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
91. Cdk4 ENSMUSG00000006728 81.49 846.75 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
92. Nr2f2 ENSMUSG00000030551 81.49 846.75 nuclear receptor subfamily 2, group F, member 2 [Source:MGI Symbol;Acc:MGI:1352452]
93. Col1a2 ENSMUSG00000029661 80.31 834.49 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
94. Gm14303 ENSMUSG00000081344 80.31 834.49 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
95. Adprh ENSMUSG00000002844 79.13 822.23 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
96. Plagl1 ENSMUSG00000019817 79.13 822.23 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
97. Rpl32 ENSMUSG00000057841 79.13 822.23 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
98. Hmgn1 ENSMUSG00000040681 77.95 809.97 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
99. Caprin1 ENSMUSG00000027184 76.77 797.71 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
100. Hnrnpa0 ENSMUSG00000007836 76.77 797.71 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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