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Experiment Mouse_E11_5_slice_1, section s51.

Sample reads: 96,256. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4640.90 48214.26 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 3605.93 37461.97 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Rnr2 ENSMUSG00000064339 3300.61 34290.00 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. mt-Nd4 ENSMUSG00000064363 3151.86 32744.64 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 2686.83 27913.45 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 2585.06 26856.16 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 2311.05 24009.47 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 1180.58 12265.03 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd2 ENSMUSG00000064345 1141.44 11858.41 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Nd3 ENSMUSG00000064360 906.57 9418.35 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. Mdk ENSMUSG00000027239 704.59 7319.98 midkine [Source:MGI Symbol;Acc:MGI:96949]
12. mt-Nd5 ENSMUSG00000064367 657.62 6832.01 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
13. mt-Co3 ENSMUSG00000064358 641.96 6669.32 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. Actb ENSMUSG00000029580 634.13 6587.97 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. H19 ENSMUSG00000000031 569.93 5921.00 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
16. Gm13340 ENSMUSG00000083563 502.61 5221.61 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
17. Hbb-y ENSMUSG00000052187 411.79 4278.08 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
18. Hmga2 ENSMUSG00000056758 394.57 4099.18 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Gm10800 ENSMUSG00000075014 388.31 4034.15 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
20. Igf2 ENSMUSG00000048583 375.78 3903.97 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
21. Eef1a1 ENSMUSG00000037742 336.64 3497.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
22. Npm1 ENSMUSG00000057113 313.15 3253.31 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. Peg3 ENSMUSG00000002265 280.27 2911.72 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
24. mt-Rnr1 ENSMUSG00000064337 247.39 2570.13 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
25. Tuba1b ENSMUSG00000023004 220.77 2293.58 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Rpsa ENSMUSG00000032518 214.51 2228.54 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Ubb ENSMUSG00000019505 214.51 2228.54 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
28. Hba-a1 ENSMUSG00000069919 203.55 2114.68 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
29. Cfl1 ENSMUSG00000056201 197.29 2049.64 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
30. Hsp90ab1 ENSMUSG00000023944 192.59 2000.82 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
31. Hbb-bh1 ENSMUSG00000052217 186.32 1935.68 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
32. Grb10 ENSMUSG00000020176 184.76 1919.47 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
33. Nedd4 ENSMUSG00000032216 181.63 1886.95 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
34. Pbx1 ENSMUSG00000052534 176.93 1838.12 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
35. Sfrp1 ENSMUSG00000031548 173.80 1805.61 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
36. Hba-x ENSMUSG00000055609 165.97 1724.26 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
37. Pkm ENSMUSG00000032294 165.97 1724.26 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
38. Set ENSMUSG00000054766 162.84 1691.74 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
39. Tubb5 ENSMUSG00000001525 159.71 1659.23 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
40. Myl6 ENSMUSG00000090841 155.01 1610.40 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
41. Ybx1 ENSMUSG00000028639 148.75 1545.36 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
42. Banf1 ENSMUSG00000024844 145.62 1512.84 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
43. Hnrnpc ENSMUSG00000060373 140.92 1464.02 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
44. Eif4g2 ENSMUSG00000005610 136.22 1415.19 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
45. Eef1b2 ENSMUSG00000025967 134.65 1398.88 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
46. Col1a2 ENSMUSG00000029661 133.09 1382.67 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
47. Rpl4 ENSMUSG00000032399 133.09 1382.67 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
48. Ago2 ENSMUSG00000036698 129.96 1350.15 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
49. Atp5g3 ENSMUSG00000018770 129.96 1350.15 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
50. Hba-a2 ENSMUSG00000069917 129.96 1350.15 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
51. Rpl23 ENSMUSG00000071415 129.96 1350.15 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
52. Gm17132 ENSMUSG00000061331 128.39 1333.84 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
53. U2af2 ENSMUSG00000030435 126.83 1317.64 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
54. Rpl18a ENSMUSG00000045128 125.26 1301.32 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
55. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 125.26 1301.32 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
56. Tpt1 ENSMUSG00000060126 125.26 1301.32 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
57. Ywhab ENSMUSG00000018326 125.26 1301.32 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
58. Fkbp1a ENSMUSG00000032966 122.13 1268.81 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
59. Malat1 ENSMUSG00000092341 122.13 1268.81 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
60. Ran ENSMUSG00000029430 117.43 1219.98 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
61. Rrm2 ENSMUSG00000020649 115.87 1203.77 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
62. Chchd2 ENSMUSG00000070493 112.73 1171.15 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
63. Col3a1 ENSMUSG00000026043 112.73 1171.15 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
64. Eif5a ENSMUSG00000078812 112.73 1171.15 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
65. Gpc3 ENSMUSG00000055653 112.73 1171.15 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
66. Rps20 ENSMUSG00000028234 103.34 1073.60 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
67. Rps26 ENSMUSG00000025362 101.77 1057.29 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
68. Wbp5 101.77 1057.29 WW domain binding protein 5
69. Hsp90aa1 ENSMUSG00000021270 100.21 1041.08 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
70. Lamp1 ENSMUSG00000031447 97.08 1008.56 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
71. Ndufa12 ENSMUSG00000020022 97.08 1008.56 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
72. Rps4x ENSMUSG00000031320 97.08 1008.56 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
73. Gm5805 ENSMUSG00000061848 95.51 992.25 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
74. Paics ENSMUSG00000029247 95.51 992.25 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
75. H3f3b ENSMUSG00000016559 92.38 959.73 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
76. Ddx5 ENSMUSG00000020719 90.81 943.42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
77. Meg3 ENSMUSG00000021268 90.81 943.42 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
78. Cox8a ENSMUSG00000035885 89.25 927.22 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
79. Trim28 ENSMUSG00000005566 89.25 927.22 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
80. Hnrnpa2b1 ENSMUSG00000004980 87.68 910.91 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
81. Pabpc1 ENSMUSG00000022283 87.68 910.91 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
82. Pcbp1 ENSMUSG00000051695 87.68 910.91 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
83. Gm14303 ENSMUSG00000081344 86.12 894.70 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
84. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 86.12 894.70 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
85. Ngfrap1 86.12 894.70 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
86. Tecr ENSMUSG00000031708 84.55 878.39 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
87. 2810417H13Rik 82.98 862.08 RIKEN cDNA 2810417H13 gene
88. Hmgn1 ENSMUSG00000040681 82.98 862.08 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
89. Anp32b ENSMUSG00000028333 81.42 845.87 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
90. Rps5 ENSMUSG00000012848 81.42 845.87 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
91. Sub1 ENSMUSG00000022205 81.42 845.87 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
92. Ddx39b ENSMUSG00000019432 79.85 829.56 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
93. Son ENSMUSG00000022961 79.85 829.56 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
94. Atxn7l3b ENSMUSG00000074748 78.29 813.35 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
95. Marcks ENSMUSG00000069662 78.29 813.35 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
96. Rps3a1 ENSMUSG00000028081 76.72 797.04 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
97. Arpc2 ENSMUSG00000006304 75.16 780.84 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
98. F2r ENSMUSG00000048376 75.16 780.84 coagulation factor II (thrombin) receptor [Source:MGI Symbol;Acc:MGI:101802]
99. Tuba1a ENSMUSG00000072235 75.16 780.84 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
100. Cdk4 ENSMUSG00000006728 73.59 764.53 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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