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Experiment Mouse_E11_5_slice_1, section s19.

Sample reads: 96,254. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5683.97 59052.52 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Cytb ENSMUSG00000064370 3759.71 39060.79 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. Ptma ENSMUSG00000026238 3716.01 38606.78 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Nd4 ENSMUSG00000064363 2651.68 27549.12 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 2414.84 25088.52 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 2224.53 23111.33 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 1990.52 20680.13 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 1354.74 14074.81 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 1132.00 11760.70 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd5 ENSMUSG00000064367 869.79 9036.52 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. mt-Nd3 ENSMUSG00000064360 707.68 7352.31 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. mt-Co3 ENSMUSG00000064358 600.54 6239.20 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. H19 ENSMUSG00000000031 525.82 5462.91 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Actb ENSMUSG00000029580 469.44 4877.16 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Eef1a1 ENSMUSG00000037742 452.52 4701.37 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Hbb-y ENSMUSG00000052187 449.70 4672.07 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
17. Gm13340 ENSMUSG00000083563 417.28 4335.25 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. mt-Rnr1 ENSMUSG00000064337 407.41 4232.71 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
19. Mdk ENSMUSG00000027239 329.87 3427.12 midkine [Source:MGI Symbol;Acc:MGI:96949]
20. Hba-a1 ENSMUSG00000069919 269.26 2797.43 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
21. Npm1 ENSMUSG00000057113 259.39 2694.88 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
22. Gm10800 ENSMUSG00000075014 250.93 2606.99 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
23. Hba-x ENSMUSG00000055609 250.93 2606.99 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
24. Rpsa ENSMUSG00000032518 250.93 2606.99 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
25. Malat1 ENSMUSG00000092341 249.52 2592.34 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
26. Nedd4 ENSMUSG00000032216 231.19 2401.90 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
27. Ubb ENSMUSG00000019505 215.69 2240.87 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
28. Tuba1a ENSMUSG00000072235 205.82 2138.33 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
29. Tubb5 ENSMUSG00000001525 205.82 2138.33 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
30. Hnrnpc ENSMUSG00000060373 204.41 2123.68 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
31. Igf2 ENSMUSG00000048583 204.41 2123.68 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
32. Cfl1 ENSMUSG00000056201 200.18 2079.73 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
33. Hmga2 ENSMUSG00000056758 200.18 2079.73 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
34. Pkm ENSMUSG00000032294 200.18 2079.73 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
35. Tuba1b ENSMUSG00000023004 200.18 2079.73 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
36. Tubb2b ENSMUSG00000045136 195.95 2035.79 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
37. Hbb-bh1 ENSMUSG00000052217 191.72 1991.84 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
38. Rpl4 ENSMUSG00000032399 180.44 1874.65 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
39. Set ENSMUSG00000054766 174.80 1816.05 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
40. Myl6 ENSMUSG00000090841 173.40 1801.51 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
41. Tmsb4x ENSMUSG00000049775 169.17 1757.56 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
42. Tpt1 ENSMUSG00000060126 160.71 1669.67 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
43. Rpl23 ENSMUSG00000071415 152.25 1581.77 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
44. Eif4g2 ENSMUSG00000005610 150.84 1567.12 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
45. Hsp90ab1 ENSMUSG00000023944 149.43 1552.47 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
46. Ybx1 ENSMUSG00000028639 146.61 1523.18 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
47. Map1b ENSMUSG00000052727 142.38 1479.23 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
48. Banf1 ENSMUSG00000024844 138.15 1435.28 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
49. Chchd2 ENSMUSG00000070493 136.74 1420.63 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
50. Eef1b2 ENSMUSG00000025967 135.33 1405.99 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
51. Rps20 ENSMUSG00000028234 135.33 1405.99 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
52. Atp5g3 ENSMUSG00000018770 129.69 1347.39 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
53. Hba-a2 ENSMUSG00000069917 129.69 1347.39 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
54. Rpl18a ENSMUSG00000045128 128.28 1332.74 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
55. Rrm2 ENSMUSG00000020649 128.28 1332.74 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
56. Grb10 ENSMUSG00000020176 122.65 1274.25 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
57. Cd24a ENSMUSG00000047139 119.83 1244.95 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
58. Paics ENSMUSG00000029247 119.83 1244.95 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
59. Rps26 ENSMUSG00000025362 117.01 1215.65 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
60. Hsp90aa1 ENSMUSG00000021270 115.60 1201.00 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
61. Gm17132 ENSMUSG00000061331 114.19 1186.36 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
62. Ndufa12 ENSMUSG00000020022 114.19 1186.36 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
63. Morf4l1 ENSMUSG00000062270 111.37 1157.06 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
64. Cox8a ENSMUSG00000035885 108.55 1127.76 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
65. Rps4x ENSMUSG00000031320 105.73 1098.46 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
66. Eif5a ENSMUSG00000078812 102.91 1069.16 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
67. Gm14303 ENSMUSG00000081344 102.91 1069.16 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
68. Rps5 ENSMUSG00000012848 102.91 1069.16 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
69. Ngfrap1 101.50 1054.51 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
70. Peg3 ENSMUSG00000002265 101.50 1054.51 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
71. Tubb3 ENSMUSG00000062380 101.50 1054.51 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
72. Fkbp1a ENSMUSG00000032966 100.09 1039.87 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
73. Morf4l2 ENSMUSG00000031422 98.68 1025.22 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
74. Sub1 ENSMUSG00000022205 98.68 1025.22 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
75. Marcks ENSMUSG00000069662 97.27 1010.57 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
76. Pabpc1 ENSMUSG00000022283 97.27 1010.57 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
77. U2af2 ENSMUSG00000030435 94.45 981.27 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
78. Mapre1 ENSMUSG00000027479 93.04 966.62 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
79. Ddx5 ENSMUSG00000020719 90.22 937.32 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
80. Lamp1 ENSMUSG00000031447 88.81 922.67 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
81. Cdc42 ENSMUSG00000006699 85.99 893.38 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
82. Hnrnpa2b1 ENSMUSG00000004980 85.99 893.38 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
83. Hnrnph1 ENSMUSG00000007850 85.99 893.38 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
84. Pcbp1 ENSMUSG00000051695 85.99 893.38 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
85. Rpl26 ENSMUSG00000060938 85.99 893.38 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
86. Cdkn1c ENSMUSG00000037664 84.58 878.73 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
87. Hdac2 ENSMUSG00000019777 84.58 878.73 histone deacetylase 2 [Source:MGI Symbol;Acc:MGI:1097691]
88. Pbx1 ENSMUSG00000052534 84.58 878.73 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
89. Ywhab ENSMUSG00000018326 84.58 878.73 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
90. Ccnd2 ENSMUSG00000000184 83.17 864.08 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
91. Ran ENSMUSG00000029430 83.17 864.08 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
92. Gm5805 ENSMUSG00000061848 81.76 849.43 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
93. Hspe1 ENSMUSG00000073676 81.76 849.43 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
94. Rps3a1 ENSMUSG00000028081 81.76 849.43 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
95. Cadm1 ENSMUSG00000032076 80.35 834.78 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
96. Dync1i2 ENSMUSG00000027012 80.35 834.78 dynein cytoplasmic 1 intermediate chain 2 [Source:MGI Symbol;Acc:MGI:107750]
97. Col3a1 ENSMUSG00000026043 78.94 820.13 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
98. Gap43 ENSMUSG00000047261 78.94 820.13 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
99. Meg3 ENSMUSG00000021268 78.94 820.13 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
100. Rpl14-ps1 ENSMUSG00000046721 77.53 805.48 ribosomal protein L14, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3710579]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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