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Experiment Mouse_E11_5_slice_1, section s18.

Sample reads: 96,224. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3955.29 41105.17 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Rnr2 ENSMUSG00000064339 3955.29 41105.17 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Cytb ENSMUSG00000064370 3629.66 37721.08 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 2512.39 26109.90 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 2327.16 24184.90 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Co2 ENSMUSG00000064354 2066.85 21479.64 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Atp6 ENSMUSG00000064357 1913.79 19888.98 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
8. mt-Nd2 ENSMUSG00000064345 1246.93 12958.66 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 930.08 9665.81 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd3 ENSMUSG00000064360 827.71 8601.94 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Nd5 ENSMUSG00000064367 570.33 5927.13 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
12. mt-Co3 ENSMUSG00000064358 561.56 5835.99 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. H19 ENSMUSG00000000031 543.04 5643.52 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Hbb-y ENSMUSG00000052187 505.99 5258.48 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
15. Eef1a1 ENSMUSG00000037742 456.27 4741.77 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Actb ENSMUSG00000029580 425.07 4417.52 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
17. mt-Rnr1 ENSMUSG00000064337 413.37 4295.93 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
18. Mdk ENSMUSG00000027239 367.55 3819.75 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Gm13340 ENSMUSG00000083563 363.65 3779.22 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Hba-x ENSMUSG00000055609 362.67 3769.03 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
21. Rpsa ENSMUSG00000032518 296.38 3080.12 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Igf2 ENSMUSG00000048583 279.80 2907.81 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
23. Hba-a1 ENSMUSG00000069919 277.85 2887.54 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
24. Cfl1 ENSMUSG00000056201 271.03 2816.67 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Tuba1a ENSMUSG00000072235 268.11 2786.32 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
26. Pkm ENSMUSG00000032294 264.21 2745.79 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
27. Tubb2b ENSMUSG00000045136 243.73 2532.95 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
28. Nedd4 ENSMUSG00000032216 238.86 2482.34 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
29. Tubb5 ENSMUSG00000001525 230.08 2391.10 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
30. Npm1 ENSMUSG00000057113 228.13 2370.83 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
31. Ubb ENSMUSG00000019505 222.28 2310.03 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
32. Gm10800 ENSMUSG00000075014 195.96 2036.51 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
33. Chchd2 ENSMUSG00000070493 182.31 1894.65 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
34. Eif4g2 ENSMUSG00000005610 181.34 1884.57 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
35. Tmsb4x ENSMUSG00000049775 178.41 1854.12 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
36. Hnrnpc ENSMUSG00000060373 173.54 1803.51 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
37. Tpt1 ENSMUSG00000060126 166.71 1732.53 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
38. Rpl4 ENSMUSG00000032399 163.79 1702.18 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
39. Hbb-bh1 ENSMUSG00000052217 159.89 1661.65 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
40. Tuba1b ENSMUSG00000023004 159.89 1661.65 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
41. Ybx1 ENSMUSG00000028639 155.01 1610.93 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
42. Banf1 ENSMUSG00000024844 152.09 1580.59 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
43. Rpl23 ENSMUSG00000071415 151.11 1570.40 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
44. Cd24a ENSMUSG00000047139 147.21 1529.87 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
45. Map1b ENSMUSG00000052727 146.24 1519.79 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
46. Hba-a2 ENSMUSG00000069917 144.29 1499.53 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
47. Rps26 ENSMUSG00000025362 144.29 1499.53 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
48. Myl6 ENSMUSG00000090841 142.34 1479.26 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
49. Set ENSMUSG00000054766 142.34 1479.26 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
50. Hsp90aa1 ENSMUSG00000021270 140.39 1459.00 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
51. Hsp90ab1 ENSMUSG00000023944 140.39 1459.00 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
52. Rps20 ENSMUSG00000028234 139.41 1448.81 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
53. Hmga2 ENSMUSG00000056758 137.46 1428.55 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
54. Eef1b2 ENSMUSG00000025967 135.52 1408.39 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
55. Atp5g3 ENSMUSG00000018770 131.62 1367.85 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
56. Grb10 ENSMUSG00000020176 128.69 1337.40 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
57. U2af2 ENSMUSG00000030435 126.74 1317.14 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
58. Ndufa12 ENSMUSG00000020022 120.89 1256.34 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
59. Ywhab ENSMUSG00000018326 118.94 1236.08 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
60. Fkbp1a ENSMUSG00000032966 116.02 1205.73 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
61. Stmn2 ENSMUSG00000027500 115.04 1195.55 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
62. Rrm2 ENSMUSG00000020649 114.07 1185.47 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
63. Eif5a ENSMUSG00000078812 113.09 1175.28 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
64. Rps4x ENSMUSG00000031320 113.09 1175.28 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
65. Gm5805 ENSMUSG00000061848 112.12 1165.20 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
66. Malat1 ENSMUSG00000092341 112.12 1165.20 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
67. Tubb3 ENSMUSG00000062380 110.17 1144.94 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
68. Cox8a ENSMUSG00000035885 108.22 1124.67 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
69. Gm14303 ENSMUSG00000081344 107.24 1114.49 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
70. Cdkn1c ENSMUSG00000037664 105.29 1094.22 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
71. Sub1 ENSMUSG00000022205 105.29 1094.22 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
72. Cdk4 ENSMUSG00000006728 103.34 1073.96 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
73. Rps3a1 ENSMUSG00000028081 103.34 1073.96 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
74. Gm15459 ENSMUSG00000100801 102.37 1063.88 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
75. Basp1 ENSMUSG00000045763 101.39 1053.69 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
76. Tecr ENSMUSG00000031708 101.39 1053.69 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
77. Lamp1 ENSMUSG00000031447 99.44 1033.43 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
78. Hnrnpa2b1 ENSMUSG00000004980 98.47 1023.34 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
79. Rpl18a ENSMUSG00000045128 98.47 1023.34 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
80. Rps5 ENSMUSG00000012848 98.47 1023.34 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
81. Ran ENSMUSG00000029430 97.49 1013.16 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
82. Pcbp1 ENSMUSG00000051695 96.52 1003.08 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
83. Gm17132 ENSMUSG00000061331 95.54 992.90 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
84. Marcks ENSMUSG00000069662 95.54 992.90 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
85. Paics ENSMUSG00000029247 94.57 982.81 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
86. Ngfrap1 93.59 972.63 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
87. Rplp1 ENSMUSG00000007892 92.62 962.55 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
88. Caprin1 ENSMUSG00000027184 89.69 932.10 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
89. Pabpc1 ENSMUSG00000022283 89.69 932.10 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
90. Son ENSMUSG00000022961 89.69 932.10 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
91. Pbx1 ENSMUSG00000052534 86.77 901.75 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
92. Rpl41 ENSMUSG00000093674 86.77 901.75 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
93. Nnat ENSMUSG00000067786 85.79 891.57 neuronatin [Source:MGI Symbol;Acc:MGI:104716]
94. Trp53i11 ENSMUSG00000068735 85.79 891.57 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
95. Stmn1 ENSMUSG00000028832 84.82 881.49 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
96. Meg3 ENSMUSG00000021268 83.84 871.30 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
97. Ywhae ENSMUSG00000020849 83.84 871.30 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
98. Anp32b ENSMUSG00000028333 82.87 861.22 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
99. Hdac2 ENSMUSG00000019777 81.89 851.04 histone deacetylase 2 [Source:MGI Symbol;Acc:MGI:1097691]
100. Col3a1 ENSMUSG00000026043 80.92 840.96 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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