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Experiment Mouse_E11_5_slice_1, section s12.

Sample reads: 96,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4750.93 49365.99 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Rnr2 ENSMUSG00000064339 3473.89 36096.52 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Cytb ENSMUSG00000064370 2775.98 28844.67 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 2304.57 23946.34 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 1836.84 19086.25 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Atp6 ENSMUSG00000064357 1718.99 17861.69 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Nd5 ENSMUSG00000064367 1300.06 13508.67 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
8. mt-Co2 ENSMUSG00000064354 1226.40 12743.28 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. mt-Nd2 ENSMUSG00000064345 948.35 9854.12 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Co1 ENSMUSG00000064351 932.69 9691.40 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. Eef1a1 ENSMUSG00000037742 586.50 6094.21 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. Actb ENSMUSG00000029580 565.32 5874.13 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. mt-Rnr1 ENSMUSG00000064337 482.46 5013.15 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
14. mt-Nd3 ENSMUSG00000064360 472.33 4907.89 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
15. mt-Co3 ENSMUSG00000064358 423.53 4400.82 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Hbb-y ENSMUSG00000052187 379.34 3941.65 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
17. Gm10800 ENSMUSG00000075014 377.50 3922.53 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
18. Mdk ENSMUSG00000027239 372.89 3874.63 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Gm13340 ENSMUSG00000083563 344.35 3578.07 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. H19 ENSMUSG00000000031 320.41 3329.32 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Rpsa ENSMUSG00000032518 296.47 3080.56 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Cfl1 ENSMUSG00000056201 294.63 3061.44 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
23. Nedd4 ENSMUSG00000032216 294.63 3061.44 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
24. Hba-a1 ENSMUSG00000069919 282.66 2937.07 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
25. Pkm ENSMUSG00000032294 264.25 2745.77 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
26. Hba-x ENSMUSG00000055609 250.44 2602.27 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
27. Hsp90ab1 ENSMUSG00000023944 248.60 2583.15 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
28. Tubb5 ENSMUSG00000001525 248.60 2583.15 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
29. Tuba1a ENSMUSG00000072235 245.83 2554.37 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
30. Tmsb4x ENSMUSG00000049775 244.91 2544.81 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
31. Tuba1b ENSMUSG00000023004 233.86 2429.99 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
32. Npm1 ENSMUSG00000057113 225.58 2343.96 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
33. Ubb ENSMUSG00000019505 221.89 2305.62 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
34. Tpt1 ENSMUSG00000060126 213.61 2219.58 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
35. Eif4g2 ENSMUSG00000005610 210.85 2190.90 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Tubb2b ENSMUSG00000045136 205.32 2133.44 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
37. Ybx1 ENSMUSG00000028639 189.67 1970.82 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
38. Hnrnpc ENSMUSG00000060373 186.91 1942.15 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
39. Eif5a ENSMUSG00000078812 178.62 1856.01 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
40. Chchd2 ENSMUSG00000070493 170.33 1769.87 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
41. Rpl4 ENSMUSG00000032399 168.49 1750.75 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Atp5g3 ENSMUSG00000018770 156.52 1626.37 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
43. Hmga2 ENSMUSG00000056758 156.52 1626.37 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
44. Hbb-bh1 ENSMUSG00000052217 155.60 1616.81 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
45. Igf2 ENSMUSG00000048583 151.00 1569.01 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
46. Hsp90aa1 ENSMUSG00000021270 147.32 1530.77 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
47. Rpl23 ENSMUSG00000071415 147.32 1530.77 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
48. Banf1 ENSMUSG00000024844 141.79 1473.31 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
49. Set ENSMUSG00000054766 140.87 1463.75 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
50. Map1b ENSMUSG00000052727 139.03 1444.63 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
51. Eef1b2 ENSMUSG00000025967 135.35 1406.40 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
52. Rrm2 ENSMUSG00000020649 135.35 1406.40 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
53. Trp53i11 ENSMUSG00000068735 133.50 1387.17 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
54. Ran ENSMUSG00000029430 131.66 1368.05 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
55. Grb10 ENSMUSG00000020176 130.74 1358.49 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
56. Paics ENSMUSG00000029247 130.74 1358.49 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
57. Rps20 ENSMUSG00000028234 130.74 1358.49 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
58. Hba-a2 ENSMUSG00000069917 127.06 1320.26 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
59. Stmn1 ENSMUSG00000028832 127.06 1320.26 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
60. Fkbp1a ENSMUSG00000032966 126.14 1310.70 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
61. Malat1 ENSMUSG00000092341 124.30 1291.58 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
62. Cadm1 ENSMUSG00000032076 121.54 1262.90 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
63. U2af2 ENSMUSG00000030435 121.54 1262.90 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
64. Tubb3 ENSMUSG00000062380 115.09 1195.88 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
65. Ywhab ENSMUSG00000018326 114.17 1186.32 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
66. Rps26 ENSMUSG00000025362 113.25 1176.76 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
67. Pcbp1 ENSMUSG00000051695 112.33 1167.20 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
68. Pabpc1 ENSMUSG00000022283 109.57 1138.52 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
69. Cdkn1c ENSMUSG00000037664 107.72 1119.30 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
70. Rps5 ENSMUSG00000012848 107.72 1119.30 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
71. Hnrnpa2b1 ENSMUSG00000004980 104.04 1081.06 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
72. Cox8a ENSMUSG00000035885 103.12 1071.50 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
73. Gm14303 ENSMUSG00000081344 103.12 1071.50 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
74. Sub1 ENSMUSG00000022205 101.28 1052.38 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
75. Tecr ENSMUSG00000031708 101.28 1052.38 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
76. Cdk4 ENSMUSG00000006728 99.44 1033.26 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
77. Rps4x ENSMUSG00000031320 99.44 1033.26 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
78. Scd2 ENSMUSG00000025203 99.44 1033.26 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
79. Rpl18a ENSMUSG00000045128 98.52 1023.70 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
80. Cd24a ENSMUSG00000047139 97.60 1014.14 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
81. Fscn1 ENSMUSG00000029581 97.60 1014.14 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
82. Ywhae ENSMUSG00000020849 97.60 1014.14 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
83. Rplp1 ENSMUSG00000007892 96.68 1004.58 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
84. Ngfrap1 95.76 995.02 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
85. Myl6 ENSMUSG00000090841 94.83 985.36 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
86. Gm26924 Gm26924 93.91 975.80
87. Gm5805 ENSMUSG00000061848 93.91 975.80 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
88. Ndufa12 ENSMUSG00000020022 93.91 975.80 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
89. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 92.99 966.24 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
90. Gm17132 ENSMUSG00000061331 92.07 956.68 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
91. Ldha ENSMUSG00000063229 89.31 928.00 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
92. Marcksl1 ENSMUSG00000047945 87.47 908.88 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
93. Basp1 ENSMUSG00000045763 86.55 899.32 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
94. Anp32b ENSMUSG00000028333 85.63 889.76 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
95. Marcks ENSMUSG00000069662 85.63 889.76 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
96. Ywhaz ENSMUSG00000022285 85.63 889.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
97. Hnrnpa0 ENSMUSG00000007836 82.87 861.09 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
98. Lamp1 ENSMUSG00000031447 82.87 861.09 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
99. Trim28 ENSMUSG00000005566 82.87 861.09 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
100. Elavl4 ENSMUSG00000028546 81.94 851.42 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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