Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s9.

Sample reads: 96,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2343.90 24354.08 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1347.24 13998.38 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 1297.61 13482.70 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd4 ENSMUSG00000064363 1045.08 10858.81 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Rnr2 ENSMUSG00000064339 1006.19 10454.73 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Nd1 ENSMUSG00000064341 978.50 10167.02 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. Eef1a1 ENSMUSG00000037742 893.02 9278.84 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
8. mt-Co1 ENSMUSG00000064351 860.49 8940.84 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Co2 ENSMUSG00000064354 715.23 7431.53 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
10. Actb ENSMUSG00000029580 645.02 6702.02 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. Rpsa ENSMUSG00000032518 605.53 6291.71 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
12. Tubb5 ENSMUSG00000001525 601.90 6253.99 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
13. Hbb-y ENSMUSG00000052187 519.74 5400.31 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
14. Tuba1a ENSMUSG00000072235 494.32 5136.19 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
15. Tmsb4x ENSMUSG00000049775 402.48 4181.93 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
16. mt-Co3 ENSMUSG00000064358 400.81 4164.58 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. Tuba1b ENSMUSG00000023004 354.66 3685.06 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
18. Set ENSMUSG00000054766 348.76 3623.76 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
19. Npm1 ENSMUSG00000057113 318.96 3314.13 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. Tubb2b ENSMUSG00000045136 306.85 3188.30 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
21. mt-Nd5 ENSMUSG00000064367 295.20 3067.25 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
22. Ubb ENSMUSG00000019505 288.09 2993.37 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
23. Rpl23 ENSMUSG00000071415 287.18 2983.92 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
24. H19 ENSMUSG00000000031 286.88 2980.80 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
25. Hsp90ab1 ENSMUSG00000023944 281.13 2921.06 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
26. mt-Nd2 ENSMUSG00000064345 278.86 2897.47 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
27. Mdk ENSMUSG00000027239 264.94 2752.84 midkine [Source:MGI Symbol;Acc:MGI:96949]
28. Pkm ENSMUSG00000032294 255.41 2653.81 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
29. mt-Nd3 ENSMUSG00000064360 243.91 2534.32 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
30. Hmgn1 ENSMUSG00000040681 239.22 2485.59 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
31. Rpl4 ENSMUSG00000032399 238.16 2474.58 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
32. Chchd2 ENSMUSG00000070493 236.95 2462.01 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
33. Gm13340 ENSMUSG00000083563 235.59 2447.88 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
34. Eif4g2 ENSMUSG00000005610 227.26 2361.32 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
35. Hsp90aa1 ENSMUSG00000021270 226.05 2348.75 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
36. Tpt1 ENSMUSG00000060126 223.48 2322.05 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
37. Crabp1 ENSMUSG00000032291 217.28 2257.63 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
38. Rps4x ENSMUSG00000031320 195.79 2034.34 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
39. Rplp1 ENSMUSG00000007892 192.77 2002.96 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
40. Hba-a1 ENSMUSG00000069919 191.86 1993.50 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
41. Eef1b2 ENSMUSG00000025967 189.59 1969.92 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
42. Ybx1 ENSMUSG00000028639 184.75 1919.63 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
43. Rps9 ENSMUSG00000006333 182.48 1896.04 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
44. Hba-x ENSMUSG00000055609 181.87 1889.70 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
45. Rpl18a ENSMUSG00000045128 177.03 1839.41 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
46. Atp5g3 ENSMUSG00000018770 176.27 1831.52 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
47. Fkbp1a ENSMUSG00000032966 168.10 1746.63 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
48. Igf2 ENSMUSG00000048583 166.44 1729.38 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
49. Eef2 ENSMUSG00000034994 165.83 1723.04 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
50. Eif5a ENSMUSG00000078812 164.62 1710.47 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
51. Rps20 ENSMUSG00000028234 155.54 1616.12 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
52. Rps26 ENSMUSG00000025362 154.94 1609.89 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
53. Rrm2 ENSMUSG00000020649 153.88 1598.88 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
54. Hmga2 ENSMUSG00000056758 150.10 1559.60 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
55. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 150.10 1559.60 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
56. Hnrnpc ENSMUSG00000060373 149.34 1551.70 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
57. Serbp1 ENSMUSG00000036371 144.80 1504.53 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
58. Pcbp1 ENSMUSG00000051695 143.44 1490.40 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
59. Rpl8 ENSMUSG00000003970 141.62 1471.49 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
60. Ldha ENSMUSG00000063229 139.96 1454.24 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
61. Nedd4 ENSMUSG00000032216 139.51 1449.57 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
62. Cfl1 ENSMUSG00000056201 137.39 1427.54 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
63. Rps3a1 ENSMUSG00000028081 134.97 1402.39 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
64. Ran ENSMUSG00000029430 133.45 1386.60 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
65. Stmn1 ENSMUSG00000028832 128.91 1339.43 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
66. Ncl ENSMUSG00000026234 128.76 1337.87 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
67. Ccnd2 ENSMUSG00000000184 128.31 1333.19 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
68. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 127.85 1328.41 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
69. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 125.28 1301.71 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
70. Hbb-bh1 ENSMUSG00000052217 124.07 1289.14 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
71. Eef1g ENSMUSG00000071644 122.41 1271.89 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
72. Cdkn1c ENSMUSG00000037664 121.95 1267.11 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
73. Ddx5 ENSMUSG00000020719 120.59 1252.98 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
74. Hnrnpa0 ENSMUSG00000007836 120.59 1252.98 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
75. Map1b ENSMUSG00000052727 117.41 1219.94 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
76. Grb10 ENSMUSG00000020176 114.84 1193.23 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
77. H3f3b ENSMUSG00000016559 114.09 1185.44 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
78. Gm8292 ENSMUSG00000100215 112.88 1172.87 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
79. Gm5963 ENSMUSG00000052192 112.42 1168.09 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
80. Gm5805 ENSMUSG00000061848 111.51 1158.63 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
81. Rps5 ENSMUSG00000012848 110.30 1146.06 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
82. Son ENSMUSG00000022961 110.15 1144.50 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
83. Trim28 ENSMUSG00000005566 107.43 1116.24 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
84. Ywhab ENSMUSG00000018326 107.13 1113.12 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
85. Btf3 ENSMUSG00000021660 106.82 1109.90 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
86. Hnrnpk ENSMUSG00000021546 106.52 1106.79 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
87. Banf1 ENSMUSG00000024844 104.86 1089.54 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
88. Pabpc1 ENSMUSG00000022283 103.49 1075.30 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
89. Hnrnpa2b1 ENSMUSG00000004980 101.68 1056.50 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
90. Cdk4 ENSMUSG00000006728 101.22 1051.72 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
91. Anp32b ENSMUSG00000028333 100.62 1045.48 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
92. Paics ENSMUSG00000029247 99.71 1036.03 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
93. Cd24a ENSMUSG00000047139 99.26 1031.35 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
94. Mrfap1 ENSMUSG00000055302 99.11 1029.79 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
95. Lamp1 ENSMUSG00000031447 95.17 988.86 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
96. Myl6 ENSMUSG00000090841 94.87 985.74 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
97. Cox8a ENSMUSG00000035885 94.11 977.84 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
98. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 92.75 963.71 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
99. Sfpq ENSMUSG00000028820 92.75 963.71 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
100. Srsf3 ENSMUSG00000071172 91.84 954.26 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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