Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s53.

Sample reads: 96,256. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5839.28 60664.31 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Nd1 ENSMUSG00000064341 1829.64 19008.14 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. Ptma ENSMUSG00000026238 1736.21 18037.50 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Co2 ENSMUSG00000064354 1370.28 14235.85 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Cytb ENSMUSG00000064370 1284.64 13346.13 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
6. mt-Nd4 ENSMUSG00000064363 1058.86 11000.50 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 988.79 10272.55 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Atp6 ENSMUSG00000064357 981.00 10191.61 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
9. Actb ENSMUSG00000029580 949.86 9868.10 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Co3 ENSMUSG00000064358 794.14 8250.33 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
11. Eef1a1 ENSMUSG00000037742 739.64 7684.12 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. mt-Rnr1 ENSMUSG00000064337 716.29 7441.54 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
13. Rpsa ENSMUSG00000032518 677.36 7037.10 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. mt-Nd3 ENSMUSG00000064360 622.86 6470.90 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
15. Hbb-y ENSMUSG00000052187 521.64 5419.32 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
16. H19 ENSMUSG00000000031 490.50 5095.81 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. mt-Nd2 ENSMUSG00000064345 428.21 4448.68 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
18. Rpl23 ENSMUSG00000071415 389.29 4044.34 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
19. Igf2 ENSMUSG00000048583 365.93 3801.65 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
20. Hba-a1 ENSMUSG00000069919 334.79 3478.14 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
21. Hmga2 ENSMUSG00000056758 319.21 3316.27 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
22. Set ENSMUSG00000054766 319.21 3316.27 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
23. Mdk ENSMUSG00000027239 303.64 3154.52 midkine [Source:MGI Symbol;Acc:MGI:96949]
24. Rpl18a ENSMUSG00000045128 288.07 2992.76 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
25. Tuba1b ENSMUSG00000023004 288.07 2992.76 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Tubb5 ENSMUSG00000001525 288.07 2992.76 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
27. Gm13340 ENSMUSG00000083563 280.29 2911.93 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
28. Rps4x ENSMUSG00000031320 280.29 2911.93 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
29. Gm5805 ENSMUSG00000061848 272.50 2831.00 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
30. Pkm ENSMUSG00000032294 264.71 2750.07 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
31. Gm10800 ENSMUSG00000075014 241.36 2507.49 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
32. mt-Nd5 ENSMUSG00000064367 241.36 2507.49 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
33. Rpl4 ENSMUSG00000032399 233.57 2426.56 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
34. Col1a2 ENSMUSG00000029661 225.79 2345.73 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
35. Gm17132 ENSMUSG00000061331 225.79 2345.73 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
36. Hsp90aa1 ENSMUSG00000021270 225.79 2345.73 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
37. Npm1 ENSMUSG00000057113 225.79 2345.73 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
38. Rplp1 ENSMUSG00000007892 225.79 2345.73 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
39. Serbp1 ENSMUSG00000036371 218.00 2264.80 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
40. Tpt1 ENSMUSG00000060126 210.21 2183.87 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
41. Myl6 ENSMUSG00000090841 202.43 2103.05 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
42. Tmsb4x ENSMUSG00000049775 202.43 2103.05 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
43. Gm8292 ENSMUSG00000100215 194.64 2022.12 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
44. Gm26870 ENSMUSG00000097312 186.86 1941.29 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
45. Rps5 ENSMUSG00000012848 186.86 1941.29 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
46. Chchd2 ENSMUSG00000070493 179.07 1860.36 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
47. Eef2 ENSMUSG00000034994 179.07 1860.36 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
48. Peg3 ENSMUSG00000002265 179.07 1860.36 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
49. Fkbp1a ENSMUSG00000032966 171.29 1779.53 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
50. Hba-x ENSMUSG00000055609 171.29 1779.53 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
51. Hmgn1 ENSMUSG00000040681 171.29 1779.53 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
52. Hsp90ab1 ENSMUSG00000023944 171.29 1779.53 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
53. Rps26 ENSMUSG00000025362 171.29 1779.53 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
54. Rpl36a ENSMUSG00000079435 163.50 1698.60 ribosomal protein L36A [Source:MGI Symbol;Acc:MGI:1201789]
55. Ywhab ENSMUSG00000018326 155.71 1617.67 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
56. Grb10 ENSMUSG00000020176 147.93 1536.85 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
57. Rps20 ENSMUSG00000028234 147.93 1536.85 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
58. Fstl1 ENSMUSG00000022816 140.14 1455.92 follistatin-like 1 [Source:MGI Symbol;Acc:MGI:102793]
59. Meg3 ENSMUSG00000021268 140.14 1455.92 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
60. Rpl32 ENSMUSG00000057841 140.14 1455.92 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
61. Rps3a1 ENSMUSG00000028081 140.14 1455.92 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
62. Calm1 ENSMUSG00000001175 132.36 1375.09 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
63. Eif4g2 ENSMUSG00000005610 132.36 1375.09 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
64. Hba-a2 ENSMUSG00000069917 132.36 1375.09 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
65. Pabpc1 ENSMUSG00000022283 132.36 1375.09 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
66. Tuba1a ENSMUSG00000072235 132.36 1375.09 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
67. Arpc2 ENSMUSG00000006304 124.57 1294.16 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
68. Cd24a ENSMUSG00000047139 124.57 1294.16 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
69. Col3a1 ENSMUSG00000026043 124.57 1294.16 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
70. Eef1b2 ENSMUSG00000025967 124.57 1294.16 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
71. Hspa5 ENSMUSG00000026864 124.57 1294.16 heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
72. Hspe1 ENSMUSG00000073676 124.57 1294.16 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
73. Cdk4 ENSMUSG00000006728 116.79 1213.33 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
74. Col1a1 ENSMUSG00000001506 116.79 1213.33 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
75. Gm14586 ENSMUSG00000083621 116.79 1213.33 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
76. Hist1h2ap ENSMUSG00000094777 116.79 1213.33 histone cluster 1, H2ap [Source:MGI Symbol;Acc:MGI:3710573]
77. Ldha ENSMUSG00000063229 116.79 1213.33 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
78. Nasp ENSMUSG00000028693 116.79 1213.33 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
79. Pbx3 ENSMUSG00000038718 116.79 1213.33 pre B cell leukemia homeobox 3 [Source:MGI Symbol;Acc:MGI:97496]
80. Rpl36a-ps1 ENSMUSG00000060377 116.79 1213.33 ribosomal protein L36A, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642585]
81. Rpl8 ENSMUSG00000003970 116.79 1213.33 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
82. Serpinh1 ENSMUSG00000070436 116.79 1213.33 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
83. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 116.79 1213.33 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
84. Gm14303 ENSMUSG00000081344 109.00 1132.40 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
85. Gnb2l1 Gnb2l1 109.00 1132.40
86. Hbb-bh1 ENSMUSG00000052217 109.00 1132.40 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
87. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 109.00 1132.40 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
88. Mapre1 ENSMUSG00000027479 109.00 1132.40 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
89. Rps9 ENSMUSG00000006333 109.00 1132.40 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
90. Scd2 ENSMUSG00000025203 109.00 1132.40 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
91. Top2a ENSMUSG00000020914 109.00 1132.40 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
92. Wbp5 109.00 1132.40 WW domain binding protein 5
93. Flna ENSMUSG00000031328 101.21 1051.47 filamin, alpha [Source:MGI Symbol;Acc:MGI:95556]
94. Gm9846 Gm9846 101.21 1051.47
95. Nme1 ENSMUSG00000037601 101.21 1051.47 NME/NM23 nucleoside diphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:97355]
96. Ubb ENSMUSG00000019505 101.21 1051.47 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
97. Acta2 ENSMUSG00000035783 93.43 970.64 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
98. Asb4 ENSMUSG00000042607 93.43 970.64 ankyrin repeat and SOCS box-containing 4 [Source:MGI Symbol;Acc:MGI:1929751]
99. Eef1g ENSMUSG00000071644 93.43 970.64 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
100. Gm10076 ENSMUSG00000060143 93.43 970.64 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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