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Experiment Mouse_E10_5_slice_3, section s48.

Sample reads: 96,251. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5414.91 56258.15 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Nd1 ENSMUSG00000064341 3845.11 39948.73 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Atp6 ENSMUSG00000064357 3196.91 33214.26 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Cytb ENSMUSG00000064370 3166.05 32893.64 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Nd4 ENSMUSG00000064363 2791.24 28999.56 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co1 ENSMUSG00000064351 2270.91 23593.60 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. mt-Co2 ENSMUSG00000064354 1953.42 20295.04 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co3 ENSMUSG00000064358 1530.11 15897.06 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
9. Ptma ENSMUSG00000026238 1512.47 15713.79 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
10. Hbb-y ENSMUSG00000052187 1261.13 13102.50 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
11. mt-Nd3 ENSMUSG00000064360 1203.80 12506.87 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. mt-Nd2 ENSMUSG00000064345 833.40 8658.60 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
13. Eef1a1 ENSMUSG00000037742 771.67 8017.26 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Actb ENSMUSG00000029580 657.02 6826.10 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Gm13340 ENSMUSG00000083563 608.52 6322.21 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
16. mt-Nd5 ENSMUSG00000064367 560.01 5818.22 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
17. Rpsa ENSMUSG00000032518 515.92 5360.15 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
18. Npm1 ENSMUSG00000057113 467.41 4856.15 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
19. mt-Rnr1 ENSMUSG00000064337 458.59 4764.52 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
20. Hbb-bh1 ENSMUSG00000052217 401.27 4168.99 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
21. Rpl23 ENSMUSG00000071415 383.63 3985.72 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
22. Rps4x ENSMUSG00000031320 352.76 3665.00 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
23. Gm5805 ENSMUSG00000061848 291.03 3023.65 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
24. Rps20 ENSMUSG00000028234 268.98 2794.56 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
25. Rpl18a ENSMUSG00000045128 260.16 2702.93 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
26. Rpl4 ENSMUSG00000032399 260.16 2702.93 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
27. Set ENSMUSG00000054766 251.34 2611.29 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
28. Hmga2 ENSMUSG00000056758 246.93 2565.48 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
29. H19 ENSMUSG00000000031 242.52 2519.66 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
30. Tubb5 ENSMUSG00000001525 211.66 2199.04 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
31. Peg3 ENSMUSG00000002265 207.25 2153.22 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
32. Rplp1 ENSMUSG00000007892 202.84 2107.40 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
33. Hba-a1 ENSMUSG00000069919 198.43 2061.59 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
34. Tmsb4x ENSMUSG00000049775 198.43 2061.59 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
35. Ywhab ENSMUSG00000018326 198.43 2061.59 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
36. Hsp90aa1 ENSMUSG00000021270 189.61 1969.95 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
37. Tpt1 ENSMUSG00000060126 189.61 1969.95 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
38. Son ENSMUSG00000022961 176.38 1832.50 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
39. Eif4g2 ENSMUSG00000005610 171.97 1786.68 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
40. Tuba1b ENSMUSG00000023004 167.56 1740.86 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
41. Wbp5 167.56 1740.86 WW domain binding protein 5
42. Rps26 ENSMUSG00000025362 163.15 1695.05 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
43. Rps5 ENSMUSG00000012848 163.15 1695.05 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
44. Gm8292 ENSMUSG00000100215 154.33 1603.41 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
45. Hmgn1 ENSMUSG00000040681 154.33 1603.41 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
46. Nedd4 ENSMUSG00000032216 149.92 1557.59 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
47. Eef1b2 ENSMUSG00000025967 145.51 1511.77 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
48. Chchd2 ENSMUSG00000070493 141.11 1466.06 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
49. Gm14303 ENSMUSG00000081344 141.11 1466.06 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
50. Igf2 ENSMUSG00000048583 141.11 1466.06 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
51. Pabpc1 ENSMUSG00000022283 141.11 1466.06 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
52. Eef2 ENSMUSG00000034994 136.70 1420.24 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
53. Rpl32 ENSMUSG00000057841 136.70 1420.24 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
54. Hnrnpc ENSMUSG00000060373 132.29 1374.43 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
55. Col1a2 ENSMUSG00000029661 127.88 1328.61 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
56. Gm10800 ENSMUSG00000075014 127.88 1328.61 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
57. Marcks ENSMUSG00000069662 127.88 1328.61 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
58. Sfrp1 ENSMUSG00000031548 127.88 1328.61 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
59. Malat1 ENSMUSG00000092341 123.47 1282.79 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
60. Pkm ENSMUSG00000032294 123.47 1282.79 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
61. Rpl36a-ps1 ENSMUSG00000060377 123.47 1282.79 ribosomal protein L36A, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642585]
62. Tuba1a ENSMUSG00000072235 123.47 1282.79 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
63. Mapre1 ENSMUSG00000027479 114.65 1191.15 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
64. Serbp1 ENSMUSG00000036371 114.65 1191.15 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
65. Tsn ENSMUSG00000026374 114.65 1191.15 translin [Source:MGI Symbol;Acc:MGI:109263]
66. Cd24a ENSMUSG00000047139 110.24 1145.34 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
67. Ddx3x ENSMUSG00000000787 110.24 1145.34 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
68. Calm1 ENSMUSG00000001175 105.83 1099.52 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
69. Flrt3 ENSMUSG00000051379 105.83 1099.52 fibronectin leucine rich transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:1918686]
70. Gm17132 ENSMUSG00000061331 105.83 1099.52 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
71. Gpc3 ENSMUSG00000055653 105.83 1099.52 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
72. Hba-x ENSMUSG00000055609 105.83 1099.52 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
73. Hnrnpk ENSMUSG00000021546 105.83 1099.52 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
74. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 105.83 1099.52 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
75. Myl6 ENSMUSG00000090841 105.83 1099.52 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
76. Eef1g ENSMUSG00000071644 101.42 1053.70 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
77. Fstl1 ENSMUSG00000022816 101.42 1053.70 follistatin-like 1 [Source:MGI Symbol;Acc:MGI:102793]
78. Hsp90ab1 ENSMUSG00000023944 101.42 1053.70 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
79. Hspe1 ENSMUSG00000073676 101.42 1053.70 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
80. Lamp1 ENSMUSG00000031447 101.42 1053.70 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
81. Paics ENSMUSG00000029247 97.01 1007.88 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
82. Rpl26 ENSMUSG00000060938 97.01 1007.88 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
83. Rpl41 ENSMUSG00000093674 97.01 1007.88 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
84. Rps3a1 ENSMUSG00000028081 97.01 1007.88 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
85. Caprin1 ENSMUSG00000027184 92.60 962.07 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
86. Pcbp1 ENSMUSG00000051695 92.60 962.07 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
87. Sfpq ENSMUSG00000028820 92.60 962.07 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
88. Top2a ENSMUSG00000020914 92.60 962.07 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
89. Ubb ENSMUSG00000019505 92.60 962.07 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
90. Ybx1 ENSMUSG00000028639 92.60 962.07 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
91. Ywhaz ENSMUSG00000022285 92.60 962.07 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
92. Mdk ENSMUSG00000027239 88.19 916.25 midkine [Source:MGI Symbol;Acc:MGI:96949]
93. Rpl34 ENSMUSG00000062006 88.19 916.25 ribosomal protein L34 [Source:MGI Symbol;Acc:MGI:1915686]
94. Rpl37 ENSMUSG00000041841 88.19 916.25 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
95. Asb4 ENSMUSG00000042607 83.78 870.43 ankyrin repeat and SOCS box-containing 4 [Source:MGI Symbol;Acc:MGI:1929751]
96. Fkbp1a ENSMUSG00000032966 83.78 870.43 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
97. Gm14586 ENSMUSG00000083621 83.78 870.43 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
98. H3f3b ENSMUSG00000016559 83.78 870.43 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
99. Morf4l1 ENSMUSG00000062270 83.78 870.43 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
100. Ptges3 ENSMUSG00000071072 83.78 870.43 prostaglandin E synthase 3 [Source:MGI Symbol;Acc:MGI:1929282]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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